Personal tools

FFCP PHASE1:Mm9::chr3:40603935..40603972,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:40603935..40603972,+
|short_description=p1@Plk4
|description=CAGE_peak_1_at_Plk4_5end
|association_with_transcript=0bp_to_ENSMUST00000026858,ENSMUST00000168363,ENSMUST00000170825_5end
|EntrezGene=20873
|EntrezGene=20873
|HGNC=
|HGNC=
|UniProt=Q64702
|UniProt=Q64702
|association_with_transcript=0bp_to_ENSMUST00000026858,ENSMUST00000168363,ENSMUST00000170825_5end
|description=CAGE_peak_1_at_Plk4_5end
|id=chr3:40603935..40603972,+
|ontology_enrichment_disease=
|phase1_expression=7.04654927261093,1.74487703819681,1.81999695755814,0.90739263392049,1.00179145989269,9.40123922706583,7.00837921786577,3.61545305636414,1.12630977721333,1.17032263160997,2.73948749160808,3.43020283679947,5.82082481766099,4.10875891369288,26.3156711834374,36.2430728627788,41.9737126876888,5.8360500591274,3.97631857456642,8.06340338416257,19.0496969938396,14.695060777731,16.4555867157529,3.67982572424835,3.21172993494038,1.72269589234506,5.1691439539089,3.878482188346,3.23039813075836,6.04872311423834,3.99114919179548,11.4305521222734,11.0711661765223,0,17.0422455653252,12.4675984018869,13.6793468695787,11.7188856606334,26.5654017138092,23.0350447348471,12.9410927366823,17.7591826089196,14.0798002379035,1.88845226963366,1.62203089951223,1.28482726513177,1.56478268869608,2.18025156380447,0.878744730937887,0.972149495371417,2.79972843250725,0,7.3824346665404,2.17608642603403,3.6970317905671,6.17422646486273,3.43840127926508,1.54701627683233,2.02316460859598,1.05798195854407,1.90149421051854,0.677689064138264,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.92109152660777,10.2652716185393,3.51015439662396,7.15104868594699,1.14260393761521,1.76694832761291,9.0643191419066,8.62609239164127,3.67687514644008,2.20231761998777,0.766124028511126,1.84327839907492,2.37395317914349,2.28719109006024,2.6045668527838,1.11673199600552,0.56276261003168,1.22238598221448,5.30331453852602,5.55249555116501,2.60959224155421,3.25622631332691,13.9051670596485,2.6087803983151,0,0,1.07940638327563,0,0.448026887097336,5.47733238513832,10.7371103224176,10.1316541795119,12.7202246823722,4.78867627240714,7.69958864485907,20.3844191765317,35.5533351576666,8.65964164044856,11.1478340809043,10.6160133453104,5.02409070763864,9.06282592765101,1.7813056687779,10.9295755862666,3.65358573974569,8.53277339847416,5.42601505989441,6.11461277105665,6.40899615781345,0.988779870937496,2.31358971071859,16.8076004870476,11.3236794963186,15.6797478106879,10.1823803158397,1.86391761218122,2.04946557908083,0.83778682725382,3.57639877292028,25.2809912707492,26.3957201637099,25.6681858687591,1.3481157546434,0.915001205637253,4.27224797183739,1.73824320192276,1.79000820131231,1.0389402227978,1.46017136760982,14.5630290305952,13.9335807083304,1.76905930903572,0.420883711772948,15.6144531555244,11.0353010128067,16.5657159420921,14.6183673300644,17.5534167810426,14.8611915530426,11.9938207436453,1.03481348295606,16.8143034487617,20.8016688184601,18.2989169130507,11.836569551089,10.5657954705727,13.2335823278423,9.05441400194951,14.52950147775,11.937624184325,19.5584409407184,24.438060948021,17.1914391204467,14.540615718828,15.4853372856473,13.2577051927718,12.7896750635812,14.3468414985262,11.1616293480196,15.0233104783787,9.45799273174073,12.0128690436841,5.08919138645195,3.40489000092594,1.75439984910399,3.73235195994786,2.95254121272818,1.26173969138476,4.6307075570678,1.65209391491899,6.08236303326152,17.9162130449597,16.2565670302307,19.5878541209582,10.8909103296605,7.78323153457046,7.03834816616469,5.69434873853414,4.28217282282428,6.03204501120647,6.56556357735798,3.11942539390592,9.88701349519644,5.18731319699266,4.18196673834171,8.34538764193559,17.4800224292885,11.270773567308,14.0519416213267,10.2794818198842,11.3620028222316,6.9560190836683,2.21415221969403,2.82597710114475,1.97435462274881,0.889357881261447,26.1946815974268,24.9629923793768,23.6105218004096,28.8061372371674,23.3941844959844,15.786802810448,14.3848068725405,10.3766545136023,9.06052663520669,4.31304619582064,8.18710084870708,4.36852742360385,3.28352541331245,3.04975602987251,1.92977408545347,2.95605104266567,18.5701583535075,23.4669566076517,16.4652733201932,14.7854856421756,12.8979818230198,7.61739650835244,4.87834119644497,10.0886492227962,10.85176979279,6.69710028361446,2.29408640602033,3.9717545829156,3.47157740595628,1.50791283939272,2.71952841909355,4.91764273019036,3.31124095565679,0.642202359951168,1.28932855251423,12.622990794004,2.7771801992481,17.9839685067266,16.3984272604588,14.4333676480975,14.5770966751057,9.58034298554295,9.90767857760913,12.1443210502468,11.1057226006299,9.88219444866309,1.60660658210904,6.10342366395555,6.23229612835393,16.7773568134183,3.62934270539578,0,12.867373716214,9.67435382287203,7.73280826999182,4.13422650033082,5.22639751504677,9.8202751403924,8.36127577798263,8.55593708123331,5.68866164284469,4.21674434299995,6.18813259489121,1.36175842301515,14.5849486165361,4.13947788104814,10.2881776815164,4.78818630834139,6.42127743367454,5.43011767986999,1.522324745573,7.04015124191131,2.96564899209348,1.32317038832977,4.9465875882444,9.36493674836252,15.1988570818953,9.54978752025092,9.19189038572343,3.78925087618806,1.8542530201051,19.8210221725509,16.3045625690946,20.556592538038,23.7344255825911,30.7562012372307,20.3612574153805,19.8874763092811,19.4532518729885,20.7299960706636,0.954670618015114,18.663823621287,18.9087104427969,12.4206141945071,10.4544148007234,9.17122767733946,10.1148259788616,8.18269211680826,1.83229159388821,3.75883422546199,3.10669656543463,85.1176337413127,16.8953697029696,15.0567226315959,14.0004855607714,11.1077448190849,15.20605129417,12.7919390123872,17.4473875690893,18.6649633077765,31.1643515865548,50.4052510951265,10.4283669807299,11.3526120562492,12.1198929454496,17.4093902790245,27.0330310457897,22.6496744450642,23.7986990049538,20.3811547500917,21.5058538389554,22.55721476988,18.0478871394945,18.6144552212927,17.0294959703383,12.5058285334279,2.94749498699775,19.9787358036658,14.0850754876877,13.5986539254904,2.89784391048286,5.06742683718191,3.47988086107804,4.93047271881851,5.01572104035363,0.564751842617067,2.30162618253588,0,2.06223818812425,0.685082519770642,0,2.70009000092722,1.80128481289688,0.453142408984205,2.07104124700728,20.6536821692512,14.3648954424371,12.2928196142977,13.3708694387562,12.367176595051,13.9721066422011,8.66762238426299,9.06554251851134,7.38114182061175,8.84440241173291,7.35089969681695,9.80856975207596,14.7017166727715,12.1007538045203,12.5209322323237,10.4784612082276,14.9490780468864,13.1178269915319,9.89006161927936,11.3343168503486,5.82877729055206,11.3584515941976,14.0677352068919,9.59286349773368,10.4461412261017,10.0691383391095,15.5488776941857,11.0489278803894,12.6297825876651,10.661703161497,11.8635018124174,14.3816544268323,14.3230865109391,14.4091262302948,10.6098636039628,5.49583271463481,9.12333272937093,7.52048689169044,7.26895661861605,7.50010825006353,8.34724208233517
|phase1_expression=7.04654927261093,1.74487703819681,1.81999695755814,0.90739263392049,1.00179145989269,9.40123922706583,7.00837921786577,3.61545305636414,1.12630977721333,1.17032263160997,2.73948749160808,3.43020283679947,5.82082481766099,4.10875891369288,26.3156711834374,36.2430728627788,41.9737126876888,5.8360500591274,3.97631857456642,8.06340338416257,19.0496969938396,14.695060777731,16.4555867157529,3.67982572424835,3.21172993494038,1.72269589234506,5.1691439539089,3.878482188346,3.23039813075836,6.04872311423834,3.99114919179548,11.4305521222734,11.0711661765223,0,17.0422455653252,12.4675984018869,13.6793468695787,11.7188856606334,26.5654017138092,23.0350447348471,12.9410927366823,17.7591826089196,14.0798002379035,1.88845226963366,1.62203089951223,1.28482726513177,1.56478268869608,2.18025156380447,0.878744730937887,0.972149495371417,2.79972843250725,0,7.3824346665404,2.17608642603403,3.6970317905671,6.17422646486273,3.43840127926508,1.54701627683233,2.02316460859598,1.05798195854407,1.90149421051854,0.677689064138264,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.92109152660777,10.2652716185393,3.51015439662396,7.15104868594699,1.14260393761521,1.76694832761291,9.0643191419066,8.62609239164127,3.67687514644008,2.20231761998777,0.766124028511126,1.84327839907492,2.37395317914349,2.28719109006024,2.6045668527838,1.11673199600552,0.56276261003168,1.22238598221448,5.30331453852602,5.55249555116501,2.60959224155421,3.25622631332691,13.9051670596485,2.6087803983151,0,0,1.07940638327563,0,0.448026887097336,5.47733238513832,10.7371103224176,10.1316541795119,12.7202246823722,4.78867627240714,7.69958864485907,20.3844191765317,35.5533351576666,8.65964164044856,11.1478340809043,10.6160133453104,5.02409070763864,9.06282592765101,1.7813056687779,10.9295755862666,3.65358573974569,8.53277339847416,5.42601505989441,6.11461277105665,6.40899615781345,0.988779870937496,2.31358971071859,16.8076004870476,11.3236794963186,15.6797478106879,10.1823803158397,1.86391761218122,2.04946557908083,0.83778682725382,3.57639877292028,25.2809912707492,26.3957201637099,25.6681858687591,1.3481157546434,0.915001205637253,4.27224797183739,1.73824320192276,1.79000820131231,1.0389402227978,1.46017136760982,14.5630290305952,13.9335807083304,1.76905930903572,0.420883711772948,15.6144531555244,11.0353010128067,16.5657159420921,14.6183673300644,17.5534167810426,14.8611915530426,11.9938207436453,1.03481348295606,16.8143034487617,20.8016688184601,18.2989169130507,11.836569551089,10.5657954705727,13.2335823278423,9.05441400194951,14.52950147775,11.937624184325,19.5584409407184,24.438060948021,17.1914391204467,14.540615718828,15.4853372856473,13.2577051927718,12.7896750635812,14.3468414985262,11.1616293480196,15.0233104783787,9.45799273174073,12.0128690436841,5.08919138645195,3.40489000092594,1.75439984910399,3.73235195994786,2.95254121272818,1.26173969138476,4.6307075570678,1.65209391491899,6.08236303326152,17.9162130449597,16.2565670302307,19.5878541209582,10.8909103296605,7.78323153457046,7.03834816616469,5.69434873853414,4.28217282282428,6.03204501120647,6.56556357735798,3.11942539390592,9.88701349519644,5.18731319699266,4.18196673834171,8.34538764193559,17.4800224292885,11.270773567308,14.0519416213267,10.2794818198842,11.3620028222316,6.9560190836683,2.21415221969403,2.82597710114475,1.97435462274881,0.889357881261447,26.1946815974268,24.9629923793768,23.6105218004096,28.8061372371674,23.3941844959844,15.786802810448,14.3848068725405,10.3766545136023,9.06052663520669,4.31304619582064,8.18710084870708,4.36852742360385,3.28352541331245,3.04975602987251,1.92977408545347,2.95605104266567,18.5701583535075,23.4669566076517,16.4652733201932,14.7854856421756,12.8979818230198,7.61739650835244,4.87834119644497,10.0886492227962,10.85176979279,6.69710028361446,2.29408640602033,3.9717545829156,3.47157740595628,1.50791283939272,2.71952841909355,4.91764273019036,3.31124095565679,0.642202359951168,1.28932855251423,12.622990794004,2.7771801992481,17.9839685067266,16.3984272604588,14.4333676480975,14.5770966751057,9.58034298554295,9.90767857760913,12.1443210502468,11.1057226006299,9.88219444866309,1.60660658210904,6.10342366395555,6.23229612835393,16.7773568134183,3.62934270539578,0,12.867373716214,9.67435382287203,7.73280826999182,4.13422650033082,5.22639751504677,9.8202751403924,8.36127577798263,8.55593708123331,5.68866164284469,4.21674434299995,6.18813259489121,1.36175842301515,14.5849486165361,4.13947788104814,10.2881776815164,4.78818630834139,6.42127743367454,5.43011767986999,1.522324745573,7.04015124191131,2.96564899209348,1.32317038832977,4.9465875882444,9.36493674836252,15.1988570818953,9.54978752025092,9.19189038572343,3.78925087618806,1.8542530201051,19.8210221725509,16.3045625690946,20.556592538038,23.7344255825911,30.7562012372307,20.3612574153805,19.8874763092811,19.4532518729885,20.7299960706636,0.954670618015114,18.663823621287,18.9087104427969,12.4206141945071,10.4544148007234,9.17122767733946,10.1148259788616,8.18269211680826,1.83229159388821,3.75883422546199,3.10669656543463,85.1176337413127,16.8953697029696,15.0567226315959,14.0004855607714,11.1077448190849,15.20605129417,12.7919390123872,17.4473875690893,18.6649633077765,31.1643515865548,50.4052510951265,10.4283669807299,11.3526120562492,12.1198929454496,17.4093902790245,27.0330310457897,22.6496744450642,23.7986990049538,20.3811547500917,21.5058538389554,22.55721476988,18.0478871394945,18.6144552212927,17.0294959703383,12.5058285334279,2.94749498699775,19.9787358036658,14.0850754876877,13.5986539254904,2.89784391048286,5.06742683718191,3.47988086107804,4.93047271881851,5.01572104035363,0.564751842617067,2.30162618253588,0,2.06223818812425,0.685082519770642,0,2.70009000092722,1.80128481289688,0.453142408984205,2.07104124700728,20.6536821692512,14.3648954424371,12.2928196142977,13.3708694387562,12.367176595051,13.9721066422011,8.66762238426299,9.06554251851134,7.38114182061175,8.84440241173291,7.35089969681695,9.80856975207596,14.7017166727715,12.1007538045203,12.5209322323237,10.4784612082276,14.9490780468864,13.1178269915319,9.89006161927936,11.3343168503486,5.82877729055206,11.3584515941976,14.0677352068919,9.59286349773368,10.4461412261017,10.0691383391095,15.5488776941857,11.0489278803894,12.6297825876651,10.661703161497,11.8635018124174,14.3816544268323,14.3230865109391,14.4091262302948,10.6098636039628,5.49583271463481,9.12333272937093,7.52048689169044,7.26895661861605,7.50010825006353,8.34724208233517
|short_description=p1@Plk4
}}
}}

Revision as of 12:32, 18 April 2012

Short description:p1@Plk4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plk4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000026858, ENSMUST00000168363, ENSMUST00000170825_5end
EntrezGene:Plk4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plk4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A541.97
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F913.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C510.93
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A615.68
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.67
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C615.61
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C617.55
eyeball, neonate N01.CNhs11140.1532-43E714.86
eyeball, neonate N02.CNhs11205.1551-44G811.99
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E216.81
forelimb, embryo E12.CNhs10600.359-14H220.80
forelimb, embryo E13.CNhs10589.384-1E218.30
forelimb, embryo E14.CNhs10577.413-26A811.84
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.56
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.44
heart, embryo E11.CNhs10586.331-24E917.19
heart, embryo E12.CNhs11015.353-12F514.54
heart, embryo E13.CNhs11013.376-3I915.49
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C812.79
heart, embryo E16.CNhs11021.457-17C614.35
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I212.01
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.40
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I517.92
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D819.59
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I214.05
kidney, embryo E18.CNhs11001.1288-20C710.28
kidney, neonate N00.CNhs11214.646-21G711.36
kidney, neonate N10.CNhs11206.758-6D56.96
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F826.19
liver, embryo E13.CNhs10524.378-3H624.96
liver, embryo E14.CNhs10594.409-16E123.61
liver, embryo E15.CNhs10520.433-16D728.81
liver, embryo E16.CNhs10523.462-17F523.39
liver, embryo E17.CNhs10510.481-18A315.79
liver, embryo E18.CNhs10579.499-43G414.38
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G218.57
lung, embryo E14.CNhs10604.404-26F823.47
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A612.90
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.11
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I416.78
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E614.58
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H315.20
skin, neonate N06.CNhs11097.693-20I59.55
skin, neonate N10.CNhs11108.762-6C49.19
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G219.82
spleen, embryo E16.CNhs11035.461-43C116.30
spleen, embryo E18.CNhs11011.1271-21F220.56
spleen, neonate N10.CNhs11116.752-24D123.73
spleen, neonate N20.CNhs11112.824-19H130.76
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.73
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E318.66
stomach, embryo E15.CNhs10603.1252-16G818.91
stomach, embryo E16.CNhs11022.459-17D412.42
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B810.11
stomach, neonate N07.CNhs11210.718-18A98.18
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G585.12
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C515.06
testis, embryo E16.CNhs11033.470-26G514.00
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B712.79
testis, neonate N07.CNhs11222.726-26I417.45
testis, neonate N10.CNhs11204.763-44D918.66
testis, neonate N20.CNhs11110.839-18H331.16
testis, neonate N30.CNhs11130.1391-42E250.41
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I411.35
thymus, embryo E15.CNhs11005.430-45I212.12
thymus, embryo E16.CNhs11002.456-26C517.41
thymus, embryo E17.CNhs10581.478-18C127.03
thymus, embryo E18.CNhs10595.1273-19G422.65
thymus, neonate N02.CNhs11181.1541-43F823.80
thymus, neonate N03.CNhs11137.2104-43C720.38
thymus, neonate N06.CNhs11197.681-26C421.51
thymus, neonate N07.CNhs11211.713-19D322.56
thymus, neonate N10.CNhs11194.748-24E418.05
thymus, neonate N20.CNhs11186.820-7A218.61
thymus, neonate N25.CNhs11125.1362-25G717.03
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.60
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I820.65
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B112.37
whole body, embryo E16.CNhs10514.453-14F213.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.41
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:40603935..40603972,%2B&oldid=885479"