Personal tools

FFCP PHASE1:Mm9::chr4:135429461..135429521,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:135429461..135429521,-
|short_description=p2@Pnrc2
|description=CAGE_peak_2_at_Pnrc2_5end
|association_with_transcript=0bp_to_ENSMUST00000142585_5end
|EntrezGene=52830
|EntrezGene=52830
|HGNC=
|HGNC=
|UniProt=Q9CR73
|UniProt=Q9CR73
|association_with_transcript=0bp_to_ENSMUST00000142585_5end
|description=CAGE_peak_2_at_Pnrc2_5end
|id=chr4:135429461..135429521,-
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,5.58360652222978,5.45999087267443,3.62957053568196,1.50268718983904,6.71517087647559,6.77476657727024,6.71441281896197,2.39340827657833,1.63845168425395,0.171217968225505,0.478632953972018,4.79362043807376,5.42006494997784,7.99463428357591,6.47920855647443,1.39912375625629,32.3348719492194,38.1178125423954,27.585327366872,2.72138528483423,7.64540324246817,6.79119451761232,8.47959840805055,7.57050627521661,3.44539178469012,9.47676391549965,8.40337807474967,4.94060890586572,3.02436155711917,5.32153225572731,0.635030673459631,0.61506478758457,15.8481681015439,3.46621943701529,4.15586613396231,4.69589519403449,23.0192396905299,19.533383613095,16.2292360631877,31.7645003536748,19.8083190637949,31.0726625939938,0.629484089877886,1.21652317463417,0.734187008646726,0,0.65407546914134,1.5378032791413,1.36100929351998,2.09979632438044,0,20.1339127269284,2.90144856804538,4.36921938885203,1.28629718017973,2.29226751951005,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,4.04954872776629,2.96659908770092,0.7104801149461,0.599200221036809,0.384218305321555,0,0.675029691658453,0.630974884054146,0,0.441737081903227,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,1.27687338085188,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.605809546665472,3.09843396437821,4.92769630792852,8.60423876981386,0,5.93673510801599,2.59910566979068,5.82434953226536,4.49422144421606,1.87473354835864,1.55871602761721,1.06001872353102,1.12674735821344,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,6.05174562511018,21.4918443427153,4.89859058913922,1.21439728736295,1.52232739156071,2.30615497256059,4.37095657602605,2.11659672844269,5.40366342717605,6.42706916109372,8.82056077211461,4.42305275974937,1.61766849947409,6.40440403535141,5.33362778448744,5.59175283654366,1.17112318804619,1.25668024088073,6.13096932500619,3.11519323715393,4.79922184794726,3.93917703926501,1.49790639404823,0.457500602818626,0.628271760564322,1.21677024134594,0.767146371990992,1.66230435647648,2.10913641988085,1.73126918545538,6.84238338355512,12.1306924048164,2.10441855886474,1.30120442962704,2.06911893990126,0.720248519221397,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.351902248327898,1.09597866213787,1.11218899690239,0.348252166522167,3.08673204611915,1.99034266818493,7.02213187313235,5.1469581422943,7.672414483681,3.31401236056803,1.87620847984877,2.34080679899319,2.60419209143731,2.16440654922144,3.39387648352232,3.72054311600653,2.14618721119695,2.6856028744449,2.30383789878873,4.76085645829376,2.67527071501324,4.5321996101853,3.73235195994786,3.62357330653004,2.10289948564127,0.92614151141356,6.27795687669216,3.43785736662608,1.91959425481711,1.16118335930219,2.06187938115349,3.22693639397348,5.33707305227689,6.65789691393957,5.21981967698963,5.76446341534038,6.03204501120647,6.16765063327568,5.26403035221624,2.69645822596266,6.70027954611552,7.36822711041159,1.32767530667157,2.17072173958485,1.1270773567308,1.62921062276251,1.93952487167626,1.82353131714828,2.65593455921881,3.09981310757165,4.86696056308262,4.81248939295022,4.44678940630723,0.83422552858047,3.34150291692445,1.57403478669398,1.62288097110802,2.17059443777175,2.5462585178142,1.72617682470486,1.29708181420028,0.549122826376163,4.31304619582064,3.72140947668503,4.68056509671841,4.04126204715379,4.12614051100398,6.75420929908714,6.65111484599777,1.89491411770485,1.30371981153621,1.52770577197669,2.58159273117352,3.35012514883632,3.57065461329021,2.92700471786698,4.72905432318573,3.32197034473162,4.78364305972461,7.86543910635542,6.04397436530635,5.64131328467895,4.52373851817817,8.15858525728064,2.95058563811422,4.41498794087572,2.72936002979246,2.22702204525186,0.491804836130026,1.76729649043061,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,3.11918143715352,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,2.24924921495265,3.69044221541498,1.24645922567079,1.79175655288934,5.44401405809367,1.32745138339963,0.971122544619926,2.41858845571801,2.45186603682668,0.295301892880773,1.22974059177571,2.32585463851399,3.27180356529755,3.92147116223193,2.21225730555071,3.16255825724996,2.06271086496374,5.10659408630682,2.16073312837572,1.68166288917581,1.28602221018955,1.59606210278046,1.96205699362278,3.29098041204242,1.2178597964584,2.81606049676452,4.44847348814022,6.61585194164886,1.31909002353184,1.29171541356724,1.38719727334758,2.02932984805332,1.64140899745061,5.24665505933731,1.66882771809459,9.56876932467975,2.47664241555867,4.25947412950337,7.34636982318295,8.06495943554049,14.870581258424,2.71965487990169,3.91864066506242,3.59319931891502,3.81868247206045,2.53068794864908,1.21991680276109,3.56417624711944,3.3454127362315,4.80397640241591,4.04593039154462,2.89287095038676,6.54389854960074,4.92536898508813,6.83473244395618,1.12738587736838,0.747582730219894,1.15820943319968,1.75006069509643,0.774958940866387,1.520605129417,0.704143431874524,1.0416350787516,0.629156066554265,0.724752362478018,1.72818003754719,4.4241556887945,1.62180172232131,2.36235201479103,3.11809975146708,1.61124026100733,4.37098980518783,2.40390899039938,3.69223817936443,2.42319479875554,1.905170166375,2.21817607301049,3.99577311032985,3.75226182397285,5.37633750035217,1.36038230169127,0.443971906748129,0.538283139656854,1.17519231454855,4.056981474676,4.87974436173073,5.86085197655248,5.78794623513478,5.517293144389,0,0.920650473014354,1.71868654031819,0.859265911718438,1.37016503954128,2.2661816921691,3.37511250115903,0.45032120322422,0.906284817968409,2.5888015587591,1.3492355185943,1.59609949360412,0.853668028770671,0.729320151204882,2.09613162627982,1.47074806760011,2.22246727801615,1.85431551515005,1.92551525755089,1.76888048234658,0.50695859978048,2.07488975524684,2.24739617927718,1.60062881012173,2.35485422718014,2.38146845641537,1.62238056322798,2.89363830695558,1.23625770240992,3.38557516309114,3.42869252385415,2.12970967391205,1.43061713968393,1.59881058295561,2.07040636913727,2.19997980518359,2.74391959309159,1.31534855718921,1.7654534799962,2.24456908663095,2.13543032623513,1.67457620038458,0.818462086339379,1.39443157067369,1.73615949883027,0.249810577937946,1.87145286756327,1.93383948643468,3.06061331310149,2.42650561031467,3.47801753430632
|phase1_expression=1.92178616525753,5.58360652222978,5.45999087267443,3.62957053568196,1.50268718983904,6.71517087647559,6.77476657727024,6.71441281896197,2.39340827657833,1.63845168425395,0.171217968225505,0.478632953972018,4.79362043807376,5.42006494997784,7.99463428357591,6.47920855647443,1.39912375625629,32.3348719492194,38.1178125423954,27.585327366872,2.72138528483423,7.64540324246817,6.79119451761232,8.47959840805055,7.57050627521661,3.44539178469012,9.47676391549965,8.40337807474967,4.94060890586572,3.02436155711917,5.32153225572731,0.635030673459631,0.61506478758457,15.8481681015439,3.46621943701529,4.15586613396231,4.69589519403449,23.0192396905299,19.533383613095,16.2292360631877,31.7645003536748,19.8083190637949,31.0726625939938,0.629484089877886,1.21652317463417,0.734187008646726,0,0.65407546914134,1.5378032791413,1.36100929351998,2.09979632438044,0,20.1339127269284,2.90144856804538,4.36921938885203,1.28629718017973,2.29226751951005,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,4.04954872776629,2.96659908770092,0.7104801149461,0.599200221036809,0.384218305321555,0,0.675029691658453,0.630974884054146,0,0.441737081903227,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,1.27687338085188,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.605809546665472,3.09843396437821,4.92769630792852,8.60423876981386,0,5.93673510801599,2.59910566979068,5.82434953226536,4.49422144421606,1.87473354835864,1.55871602761721,1.06001872353102,1.12674735821344,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,6.05174562511018,21.4918443427153,4.89859058913922,1.21439728736295,1.52232739156071,2.30615497256059,4.37095657602605,2.11659672844269,5.40366342717605,6.42706916109372,8.82056077211461,4.42305275974937,1.61766849947409,6.40440403535141,5.33362778448744,5.59175283654366,1.17112318804619,1.25668024088073,6.13096932500619,3.11519323715393,4.79922184794726,3.93917703926501,1.49790639404823,0.457500602818626,0.628271760564322,1.21677024134594,0.767146371990992,1.66230435647648,2.10913641988085,1.73126918545538,6.84238338355512,12.1306924048164,2.10441855886474,1.30120442962704,2.06911893990126,0.720248519221397,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.351902248327898,1.09597866213787,1.11218899690239,0.348252166522167,3.08673204611915,1.99034266818493,7.02213187313235,5.1469581422943,7.672414483681,3.31401236056803,1.87620847984877,2.34080679899319,2.60419209143731,2.16440654922144,3.39387648352232,3.72054311600653,2.14618721119695,2.6856028744449,2.30383789878873,4.76085645829376,2.67527071501324,4.5321996101853,3.73235195994786,3.62357330653004,2.10289948564127,0.92614151141356,6.27795687669216,3.43785736662608,1.91959425481711,1.16118335930219,2.06187938115349,3.22693639397348,5.33707305227689,6.65789691393957,5.21981967698963,5.76446341534038,6.03204501120647,6.16765063327568,5.26403035221624,2.69645822596266,6.70027954611552,7.36822711041159,1.32767530667157,2.17072173958485,1.1270773567308,1.62921062276251,1.93952487167626,1.82353131714828,2.65593455921881,3.09981310757165,4.86696056308262,4.81248939295022,4.44678940630723,0.83422552858047,3.34150291692445,1.57403478669398,1.62288097110802,2.17059443777175,2.5462585178142,1.72617682470486,1.29708181420028,0.549122826376163,4.31304619582064,3.72140947668503,4.68056509671841,4.04126204715379,4.12614051100398,6.75420929908714,6.65111484599777,1.89491411770485,1.30371981153621,1.52770577197669,2.58159273117352,3.35012514883632,3.57065461329021,2.92700471786698,4.72905432318573,3.32197034473162,4.78364305972461,7.86543910635542,6.04397436530635,5.64131328467895,4.52373851817817,8.15858525728064,2.95058563811422,4.41498794087572,2.72936002979246,2.22702204525186,0.491804836130026,1.76729649043061,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,3.11918143715352,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,2.24924921495265,3.69044221541498,1.24645922567079,1.79175655288934,5.44401405809367,1.32745138339963,0.971122544619926,2.41858845571801,2.45186603682668,0.295301892880773,1.22974059177571,2.32585463851399,3.27180356529755,3.92147116223193,2.21225730555071,3.16255825724996,2.06271086496374,5.10659408630682,2.16073312837572,1.68166288917581,1.28602221018955,1.59606210278046,1.96205699362278,3.29098041204242,1.2178597964584,2.81606049676452,4.44847348814022,6.61585194164886,1.31909002353184,1.29171541356724,1.38719727334758,2.02932984805332,1.64140899745061,5.24665505933731,1.66882771809459,9.56876932467975,2.47664241555867,4.25947412950337,7.34636982318295,8.06495943554049,14.870581258424,2.71965487990169,3.91864066506242,3.59319931891502,3.81868247206045,2.53068794864908,1.21991680276109,3.56417624711944,3.3454127362315,4.80397640241591,4.04593039154462,2.89287095038676,6.54389854960074,4.92536898508813,6.83473244395618,1.12738587736838,0.747582730219894,1.15820943319968,1.75006069509643,0.774958940866387,1.520605129417,0.704143431874524,1.0416350787516,0.629156066554265,0.724752362478018,1.72818003754719,4.4241556887945,1.62180172232131,2.36235201479103,3.11809975146708,1.61124026100733,4.37098980518783,2.40390899039938,3.69223817936443,2.42319479875554,1.905170166375,2.21817607301049,3.99577311032985,3.75226182397285,5.37633750035217,1.36038230169127,0.443971906748129,0.538283139656854,1.17519231454855,4.056981474676,4.87974436173073,5.86085197655248,5.78794623513478,5.517293144389,0,0.920650473014354,1.71868654031819,0.859265911718438,1.37016503954128,2.2661816921691,3.37511250115903,0.45032120322422,0.906284817968409,2.5888015587591,1.3492355185943,1.59609949360412,0.853668028770671,0.729320151204882,2.09613162627982,1.47074806760011,2.22246727801615,1.85431551515005,1.92551525755089,1.76888048234658,0.50695859978048,2.07488975524684,2.24739617927718,1.60062881012173,2.35485422718014,2.38146845641537,1.62238056322798,2.89363830695558,1.23625770240992,3.38557516309114,3.42869252385415,2.12970967391205,1.43061713968393,1.59881058295561,2.07040636913727,2.19997980518359,2.74391959309159,1.31534855718921,1.7654534799962,2.24456908663095,2.13543032623513,1.67457620038458,0.818462086339379,1.39443157067369,1.73615949883027,0.249810577937946,1.87145286756327,1.93383948643468,3.06061331310149,2.42650561031467,3.47801753430632
|short_description=p2@Pnrc2
}}
}}

Revision as of 15:15, 18 April 2012

Short description:p2@Pnrc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pnrc2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000142585_5end
EntrezGene:Pnrc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pnrc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G931.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I35.40
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H18.82
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H25.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H18.06
spleen, neonate N25.CNhs11099.1354-25G314.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:135429461..135429521,-&oldid=901812"