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FF:10237-104A3: Difference between revisions

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|creation_date=
|creation_date=
|def=
|def=
|expression_enrichment_score=chr16:91270004..91270023,+!p1@Olig1!2.25!202.23!Olig1;;chr6:55631042..55631102,-!p1@Neurod6!1.95!88.80!Neurod6;;chr10:67375368..67375433,-!p1@Zfp365!1.92!141.51!Zfp365;;chr6:85463580..85463585,-!p1@Egr4!1.92!83.07!Egr4;;chr11:98190918..98190951,-!p1@Neurod2!1.89!76.77!Neurod2;;chr19:4989964..4989972,-!p1@Npas4!1.86!71.61!Npas4;;chr19:19185671..19185693,-!p1@Rorb!1.84!155.83!Rorb;;chr5:138199361..138199441,+!p2@Tsc22d4!1.78!109.42!Tsc22d4;;chr12:30219426..30219506,+!p2@Myt1l!1.74!54.43!Myt1l;;chr7:116154364..116154444,+!p1@Tub!1.73!88.23!Tub;;chr13:83663902..83663927,+!p1@Mef2c!1.72!1152.67!Mef2c;;chr3:95032091..95032183,-!p1@Mllt11!1.72!413.63!Mllt11;;chr13:83663546..83663560,+!p4@Mef2c!1.71!64.74!Mef2c;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!1.70!61.87!Pou3f3;;chr2:61642631..61642684,+!p1@Tbr1!1.64!42.97!Tbr1;;chr13:83663500..83663519,+!p8@Mef2c!1.62!40.68!Mef2c;;chr13:83663868..83663894,+!p2@Mef2c!1.60!532.22!Mef2c;;chr17:48015839..48015915,-!p3@Foxp4!1.59!44.69!Foxp4;;chrX:90531838..90531861,+!p1@Arx!1.58!45.83!Arx;;chr16:91225808..91225824,+!p1@Olig2!1.56!35.52!Olig2;;chr1:179374784..179374800,+!p2@Zfp238!1.54!38.96!Zfp238;;chr1:57029281..57029326,-!p1@Satb2!1.53!50.99!Satb2;;chr2:65683890..65683907,+!p1@Csrnp3!1.52!60.73!Csrnp3;;chr2:38206580..38206600,+!p2@Lhx2!1.50!37.24!Lhx2;;chr5:122452349..122452377,-!p4@Cux2!1.50!30.94!Cux2;;chr10:67375342..67375365,-!p3@Zfp365!1.50!30.36!Zfp365;;chr2:127347067..127347093,-!p1@Kcnip3!1.47!46.98!Kcnip3;;chr5:98609885..98609900,+!p1@Prdm8!1.46!28.07!Prdm8;;chr2:38206744..38206766,+!p1@Lhx2!1.45!32.66!Lhx2;;chr12:30213247..30213333,+!p1@Myt1l!1.45!27.50!Myt1l;;chr16:91270091..91270143,+!p2@Olig1!1.44!26.35!Olig1;;chr10:13685585..13685645,+!p2@Hivep2!1.43!87.08!Hivep2;;chr15:76352677..76352737,-!p3@Scrt1!1.42!25.21!Scrt1;;chrX:34442872..34442899,-!p1@Nkrf!1.40!30.94!Nkrf;;chr2:61642743..61642758,+!p2@Tbr1!1.40!24.06!Tbr1;;chr2:65768174..65768247,+!p2@Csrnp3!1.35!21.20!Csrnp3;;chr17:25707623..25707639,-!p1@Sox8!1.32!83.07!Sox8;;chr15:76352832..76352900,-!p1@Scrt1!1.32!20.05!Scrt1;;chr4:48058129..48058179,+!p2@Nr4a3!1.31!36.67!Nr4a3;;chr10:67375146..67375208,-!p2@Zfp365!1.31!29.79!Zfp365;;chr13:83643031..83643049,+!p11@Mef2c!1.31!19.48!Mef2c;;chr12:30220074..30220102,+!p3@Myt1l!1.30!18.91!Myt1l;;chr1:57028606..57028625,-!p4@Satb2!1.29!18.33!Satb2;;chr8:24780125..24780143,+!p1@Zmat4!1.28!25.78!Zmat4;;chr8:87297280..87297326,-!p2@Nfix!1.25!38.96!Nfix;;chr5:122499831..122499891,-!p1@Cux2!1.25!25.78!Cux2;;chr11:98190955..98190968,-!p2@Neurod2!1.25!16.61!Neurod2;;chr18:36441119..36441158,+!p2@Pura!1.23!38.38!Pura;;chr18:35020854..35020869,+!p1@Egr1!1.22!580.34!Egr1;;chr4:150482563..150482655,-!p2@Camta1!1.22!55.00!Camta1;;chr4:48058016..48058032,+!p3@Nr4a3!1.22!26.35!Nr4a3;;chr19:19185697..19185711,-!p2@Rorb!1.22!20.05!Rorb;;chr2:79296783..79296801,-!p1@Neurod1!1.22!15.47!Neurod1;;chr12:72149359..72149406,+!p4@Arid4a!1.20!19.48!Arid4a;;chr15:76353005..76353021,-!p2@Scrt1!1.20!14.90!Scrt1;;chr4:22415443..22415506,-!p1@Pou3f2!1.20!14.90!Pou3f2;;chr5:125342568..125342602,+!p2@Zfp664!1.18!22.92!Zfp664;;chr4:58956447..58956510,+!p1@Zkscan16!1.17!29.79!Zkscan16;;chr4:124334894..124334899,+!p1@Pou3f1!1.17!17.76!Pou3f1;;chr14:13178147..13178185,-!p1@Fezf2!1.17!13.75!Fezf2;;chr2:127347094..127347111,-!p2@Kcnip3!1.15!21.77!Kcnip3;;chr1:179374820..179374831,+!p3@Zfp238!1.15!13.18!Zfp238;;chr12:86939997..86940040,+!p4@Jdp2!1.15!13.18!Jdp2;;chr4:154335024..154335039,+!p1@Hes5!1.14!15.47!Hes5;;chr11:23980664..23980706,+!p2@Bcl11a!1.12!53.28!Bcl11a;;chr8:87297878..87297935,-!p3@Nfix!1.12!26.93!Nfix;;chr18:69680960..69681007,+!p10@Tcf4!1.12!16.04!Tcf4;;chr2:61642558..61642595,+!p3@Tbr1!1.11!12.03!Tbr1;;chr15:101097270..101097290,+!p1@Nr4a1!1.09!116.30!Nr4a1;;chr11:23978111..23978134,+!p3@Bcl11a!1.09!23.49!Bcl11a;;chr11:90250944..90250982,-!p2@Hlf!1.09!18.91!Hlf;;chr13:83663600..83663625,+!p6@Mef2c!1.09!17.19!Mef2c;;chr10:13685657..13685677,+!p7@Hivep2!1.09!14.90!Hivep2;;chr11:23978229..23978268,+!p8@Bcl11a!1.08!12.60!Bcl11a;;chr11:98636531..98636559,-!p1@Nr1d1!1.07!61.87!Nr1d1;;chr2:162769220..162769252,+!p1@L3mbtl1!1.07!10.89!L3mbtl1;;chr2:127347042..127347058,-!p3@Kcnip3!1.07!10.89!Kcnip3;;chr3:95032197..95032208,-!p3@Mllt11!1.06!13.18!Mllt11;;chr13:78339134..78339185,-!p5@Nr2f1!1.05!12.60!Nr2f1;;chr6:144152648..144152680,-!p5@Sox5!1.05!10.31!Sox5;;chr11:70501419..70501483,-!p1@Camta2,p1@LOC100048818!1.04!105.41!Camta2;;chr2:77654815..77654872,-!p2@Zfp385b!1.04!12.60!Zfp385b;;chr4:135840573..135840601,+!p1@Zfp46!1.03!78.49!Zfp46;;chr3:95032184..95032195,-!p4@Mllt11!1.03!12.03!Mllt11;;chrX:108009761..108009788,+!p1@Pou3f4!1.03!9.74!Pou3f4;;chr12:54349410..54349461,+!p1@Npas3!1.02!11.46!Npas3;;chr17:51971932..51971958,-!p2@Satb1!1.01!12.60!Satb1;;chr7:122968213..122968266,-!p4@Sox6!1.01!10.89!Sox6;;chr9:96631820..96631834,-!p11@Zbtb38!1.01!9.17!Zbtb38;;chr14:34791937..34791977,-!p1@Zfp488!1.01!9.17!Zfp488;;chr14:13178361..13178386,-!p2@Fezf2!1.01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tv4;;chr7:71083428..71083518,-!p3@Klf13!0.52!22.34!Klf13;;chr10:62328186..62328219,-!p1@Tet1!0.52!17.76!Tet1;;chr17:51951634..51951651,-!p6@Satb1!0.52!5.16!Satb1;;chr6:47785785..47785796,+!p4@Zfp398!0.52!4.01!Zfp398;;chr2:115890294..115890334,-!p9@Meis2!0.52!3.44!Meis2;;chr2:147019977..147019985,-!p2@Nkx2-2!0.52!2.29!Nkx2-2;;chr2:181501988..181502026,+!p3@Myt1!0.52!2.29!Myt1;;chr6:144157991..144158007,-!p9@Sox5!0.52!2.29!Sox5;;chr6:28347999..28348023,-!p3@Zfp800!0.52!2.29!Zfp800;;chr6:144152590..144152602,-!p22@Sox5!0.52!2.29!Sox5;;chr7:123182318..123182332,-!p11@Sox6!0.52!2.29!Sox6;;chr19:28085572..28085579,-!p9@Rfx3!0.52!2.29!Rfx3;;chr11:96685487..96685512,-!p7@Nfe2l1!0.52!2.29!Nfe2l1;;chr7:38557887..38557910,-!p5@Zfp536!0.52!2.29!Zfp536;;chr8:12395629..12395644,+!p6@Sox1!0.52!2.29!Sox1;;chr7:30088957..30088966,+!p6@Dpf1!0.52!2.29!Dpf1;;chr12:86815639..86815664,+!p2@Fos!0.52!2.29!Fos;;chr14:13178241..13178254,-!p4@Fezf2!0.52!2.29!Fezf2;;chr14:122874619..122874634,+!p1@Zic2!0.52!2.29!Zic2;;chrX:55284180..55284195,+!p2@Zic3!0.52!2.29!Zic3;;chr3:17954392..17954407,+!p2@Bhlhe22!0.52!2.29!Bhlhe22;;chr2:77654767..77654784,-!p12@Zfp385b!0.52!2.29!Zfp385b;;chr2:77541309..77541322,-!p14@Zfp385b!0.52!2.29!Zfp385b;;chr2:77541432..77541474,-!p5@Zfp385b!0.52!2.29!Zfp385b;;chr4:48058252..48058261,+!p6@Nr4a3!0.52!2.29!Nr4a3;;chr2:48805082..48805137,+!p1@Mbd5!0.51!61.30!Mbd5;;chr7:17199897..17199955,-!p1@Grlf1!0.51!32.66!Grlf1;;chr7:17200422..17200487,-!p3@Grlf1!0.51!18.33!Grlf1;;chr11:97524415..97524455,+!p2@Mllt6!0.51!10.89!Mllt6;;chr6:92041399..92041417,+!p2@Nr2c2!0.51!9.17!Nr2c2;;chr7:91558392..91558434,-!p1@Arnt2!0.51!7.45!Arnt2;;chr2:168032375..168032388,-!p4@Adnp!0.51!6.87!Adnp;;chr7:25292310..25292329,+!p5@Zfp428!0.51!3.44!Zfp428;;chr7:19895384..19895399,-!p2@Fosb!0.51!3.44!Fosb;;chr2:77654936..77654988,-!p4@Zfp385b!0.51!2.86!Zfp385b;;chr4:6917793..6917809,-!p5@Tox!0.51!2.86!Tox;;chr14:118636214..118636235,-!p1@Sox21!0.51!2.86!Sox21;;chr15:81575487..81575561,+!p1@Zc3h7b!0.50!61.87!Zc3h7b;;chr2:25562346..25562433,+!p1@Bmyc!0.50!52.71!Bmyc;;chr7:148513456..148513506,-!p1@Deaf1!0.50!44.11!Deaf1;;chr16:22439654..22439676,-!p2@Etv5!0.50!16.61!Etv5;;chr8:112603610..112603656,+!p1@Zfp612!0.50!12.60!Zfp612;;chr5:110539286..110539317,+!p2@Zfp605!0.50!6.30!Zfp605;;chr1:38684431..38684450,-!p3@Aff3!0.50!4.01!Aff3;;chr13:96094769..96094829,+!p4@Zbed3!0.50!3.44!Zbed3;;chr7:52960555..52960662,+!p1@Dbp!0.49!23.49!Dbp;;chr15:38230415..38230426,-!p2@Klf10!0.49!9.17!Klf10;;chr9:55785981..55786009,-!p2@Scaper!0.49!6.87!Scaper;;chr12:25257141..25257173,+!p1@Grhl1!0.49!5.16!Grhl1;;chr15:81633139..81633152,+!p4@Tef!0.49!4.01!Tef;;chr1:170361695..170361722,-!p12@Pbx1!0.49!2.86!Pbx1;;chr17:51952537..51952552,-!p15@Satb1!0.49!2.29!Satb1;;chr16:22439681..22439698,-!p1@Etv5!0.48!48.12!Etv5;;chr1:182499095..182499141,+!p2@Parp1!0.48!47.55!Parp1;;chr1:64167851..64167886,-!p3@Klf7!0.48!10.89!Klf7;;chr18:79306158..79306249,-!p1@Setbp1!0.48!8.59!Setbp1;;chrX:92906980..92907024,+!p2@Zc3h12b!0.48!6.30!Zc3h12b;;chr7:130644017..130644092,-!p1@Zkscan2!0.48!4.58!Zkscan2;;chr8:87324171..87324182,-!p6@Nfix!0.48!4.01!Nfix;;chr9:68501549..68501564,+!p6@Rora!0.48!2.86!Rora;;chr17:48015645..48015689,-!p9@Foxp4!0.48!2.86!Foxp4;;chr7:48888915..48888973,+!p1@Zfp788!0.47!33.80!Zfp788;;chr16:23988711..23988727,-!p1@Bcl6!0.47!31.51!Bcl6;;chr9:121669118..121669179,+!p1@Zfp651!0.47!28.07!Zfp651;;chr19:26679654..26679675,+!p1@Smarca2!0.47!24.63!Smarca2;;chr7:6238191..6238224,+!p1@Zfp667!0.47!15.47!Zfp667;;chr11:62602904..62602945,-!p1@Zfp286!0.47!12.03!Zfp286;;chr11:106993487..106993515,-!p2@Bptf!0.47!7.45!Bptf;;chr7:135019147..135019187,-!p3@Zfp668!0.47!5.16!Zfp668;;chr12:3807076..3807086,+!p8@Dnmt3a!0.47!4.01!Dnmt3a;;chrX:103070839..103070856,-!p4@Atrx!0.47!3.44!Atrx;;chr4:13670626..13670657,+!p5@Runx1t1!0.47!3.44!Runx1t1;;chr7:17200198..17200209,-!p8@Grlf1!0.47!2.86!Grlf1;;chr14:76814539..76814600,+!p2@Tsc22d1!0.46!36.67!Tsc22d1;;chr1:170362040..170362113,-!p2@Pbx1!0.46!20.05!Pbx1;;chr2:25562315..25562344,+!p3@Bmyc!0.46!8.02!Bmyc;;chr6:14851287..14851342,+!p1@Foxp2!0.46!8.02!Foxp2;;chr6:145814003..145814056,-!p1@Bhlhe41!0.46!6.87!Bhlhe41;;chr6:14851440..14851497,+!p2@Foxp2!0.46!5.73!Foxp2;;chr4:126700722..126700753,+!p4@Sfpq!0.46!5.73!Sfpq;;chr1:170361991..170362015,-!p6@Pbx1!0.46!5.16!Pbx1;;chr14:76814883..76814898,+!p9@Tsc22d1!0.46!4.58!Tsc22d1;;chr14:75684203..75684214,+!p4@Zc3h13!0.46!4.01!Zc3h13;;chr3:8667033..8667046,-!p3@Hey1!0.46!2.86!Hey1;;chr4:48057987..48057996,+!p7@Nr4a3!0.46!2.29!Nr4a3;;chr15:76701830..76701883,-!p1@Zfp251!0.45!33.80!Zfp251;;chr7:50835064..50835134,+!p1@Zfp719!0.45!19.48!Zfp719;;chr2:83484634..83484647,+!p4@Zc3h15!0.45!17.19!Zc3h15;;chr11:50729638..50729681,-!p1@Zfp2!0.45!12.60!Zfp2;;chr11:62545367..62545412,-!p1@Zfp287!0.45!9.74!Zfp287;;chr4:54960870..54960926,+!p1@Zfp462!0.45!8.59!Zfp462;;chr4:122673278..122673336,+!p1@Mycl1!0.45!7.45!Mycl1;;chr1:64167550..64167618,-!p4@Klf7!0.45!6.30!Klf7;;chr13:65380103..65380116,+!p3@Zfp369!0.4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7:28516392..28516416,+!p2@Zfp60!0.27!12.03!Zfp60;;chr7:13466514..13466553,+!p1@Zfp128!0.27!7.45!Zfp128;;chrX:137077653..137077669,-!p3@Tsc22d3!0.27!6.87!Tsc22d3;;chr6:47785748..47785776,+!p3@Zfp398!0.27!5.73!Zfp398;;chr9:48644037..48644067,-!p2@Zbtb16!0.27!3.44!Zbtb16;;chr13:67229155..67229187,+!p1@Zfp759!0.27!3.44!Zfp759;;chr19:28085997..28086028,-!p7@Rfx3!0.27!2.29!Rfx3;;chr4:45024818..45024846,-!p4@Zbtb5!0.27!2.29!Zbtb5;;chr19:25746898..25746910,+!p1@Dmrt2!0.27!1.72!Dmrt2;;chr18:5593564..5593584,+!p2@Zeb1!0.27!1.15!Zeb1;;chr15:50721942..50721987,-!p13@Trps1!0.27!1.15!Trps1;;chr6:6832076..6832092,-!p1@Dlx5!0.27!1.15!Dlx5;;chr5:3648013..3648038,-!p5@Gatad1!0.27!1.15!Gatad1;;chr4:13670661..13670681,+!p12@Runx1t1!0.27!1.15!Runx1t1;;chr15:99532709..99532743,+!p1@Smarcd1!0.26!42.39!Smarcd1;;chr19:47125313..47125405,-!p1@Pcgf6!0.26!35.52!Pcgf6;;chr10:80040030..80040072,-!p1@Klf16!0.26!32.08!Klf16;;chr12:4484016..4484074,-!p1@Ncoa1!0.26!26.35!Ncoa1;;chr8:118231705..118231722,-!p3@Maf!0.26!12.60!Maf;;chr7:26052688..26052742,+!p1@Cic!0.26!10.89!Cic;;chr15:100382390..100382441,-!p1@Tfcp2!0.26!10.31!Tfcp2;;chr2:44965593..44965624,-!p3@Zeb2!0.26!8.59!Zeb2;;chr2:127410404..127410439,-!p1@Zfp661!0.26!6.30!Zfp661;;chr2:73730619..73730630,-!p4@Atf2,p4@LOC100047997!0.26!6.30!Atf2;;chr2:128769721..128769770,-!p1@Zc3h8!0.26!5.73!Zc3h8;;chr7:17647736..17647772,-!p1@Hif3a!0.26!5.16!Hif3a;;chr1:138521510..138521526,+!p2@Zfp281!0.26!4.01!Zfp281;;chr9:87626083..87626108,-!p1@Tbx18!0.26!2.86!Tbx18;;chr4:126700576..126700598,+!p7@Sfpq!0.26!2.29!Sfpq;;chr6:47780508..47780583,-!p1@Zfp786!0.26!2.29!Zfp786;;chr6:38204214..38204267,-!p4@D630045J12Rik!0.26!2.29!D630045J12Rik;;chr9:106355684..106355744,+!p5@Pcbp4!0.26!1.72!Pcbp4;;chr10:86956396..86956411,-!p1@Ascl1!0.26!1.72!Ascl1;;chr3:103772552..103772584,+!p2@Phtf1!0.26!1.72!Phtf1;;chr15:75771423..75771445,+!p2@Zfp623!0.26!1.72!Zfp623;;chr15:40486854..40486867,+!p7@Zfpm2!0.26!1.15!Zfpm2;;chr15:103164702..103164778,-!p3@Zfp385a!0.26!1.15!Zfp385a;;chr9:30838314..30838336,+!p4@Zbtb44!0.26!1.15!Zbtb44;;chr16:30066499..30066518,+!p5@Hes1!0.26!1.15!Hes1;;chr4:13670441..13670463,+!p8@Runx1t1!0.26!1.15!Runx1t1;;chr1:38684414..38684427,-!p7@Aff3!0.26!1.15!Aff3;;chr11:98636321..98636332,-!p8@Nr1d1!0.26!1.15!Nr1d1;;chr11:98636568..98636574,-!p9@Nr1d1!0.26!1.15!Nr1d1;;chr11:23978353..23978379,+!p10@Bcl11a!0.26!1.15!Bcl11a;;chr18:61336648..61336711,-!p1@Hmgxb3!0.25!29.79!Hmgxb3;;chr15:81977802..81977828,+!p2@Srebf2!0.25!13.18!Srebf2;;chr19:28085676..28085711,-!p2@Rfx3!0.25!9.17!Rfx3;;chr14:55711198..55711258,-!p1@Zfhx2!0.25!8.59!Zfhx2;;chr19:28086045..28086080,-!p4@Rfx3!0.25!6.87!Rfx3;;chr18:69504123..69504155,+!p5@Tcf4!0.25!5.16!Tcf4;;chr18:39649534..39649569,-!p3@Nr3c1!0.25!4.58!Nr3c1;;chr16:3744146..3744157,+!p3@Zfp263!0.25!2.86!Zfp263;;chr9:72122680..72122693,+!p2@Zfp280d!0.25!2.86!Zfp280d;;chr9:68501568..68501592,+!p3@Rora!0.25!2.86!Rora;;chr7:30638614..30638628,-!p2@Zfp940!0.25!1.72!Zfp940;;chr15:50721640..50721654,-!p7@Trps1!0.25!1.72!Trps1;;chrX:7339674..7339688,+!p6@Tfe3!0.25!1.72!Tfe3;;chr11:53164556..53164567,+!p5@Aff4!0.25!1.72!Aff4;;chr11:49016787..49016800,+!p3@Zfp62!0.25!1.15!Zfp62;;chr11:69749299..69749319,+!p5@Ybx2!0.25!1.15!Ybx2;;chr13:31898767..31898785,+!p4@Foxc1!0.25!1.15!Foxc1;;chr18:65740031..65740054,+!p5@Zfp532!0.25!1.15!Zfp532;;chr18:61336630..61336641,-!p3@Hmgxb3!0.25!1.15!Hmgxb3;;chr1:165243272..165243283,-!p6@Prrx1!0.25!1.15!Prrx1;;chr2:168427252..168427273,-!p2@Nfatc2!0.25!1.15!Nfatc2;;chr2:181100264..181100275,+!p8@Zgpat!0.25!1.15!Zgpat;;chr3:87946458..87946467,+!p6@Mef2d!0.25!1.15!Mef2d;;chr18:35721854..35721914,+!p1@Matr3!0.24!118.59!Matr3;;chr9:122775056..122775117,-!p1@Zfp445!0.24!53.28!Zfp445;;chr11:58136797..58136859,-!p1@Zfp672!0.24!37.24!Zfp672;;chr13:65380147..65380174,+!p1@Zfp369!0.24!20.05!Zfp369;;chr16:55973924..55973943,+!p1@Rpl24,p1@Zbtb11!0.24!18.33!Zbtb11;;chr10:57206160..57206220,+!p1@Hsf2!0.24!16.61!Hsf2;;chr9:55785900..55785950,-!p1@Scaper!0.24!15.47!Scaper;;chr8:112229478..112229536,+!p1@Zfp821!0.24!13.18!Zfp821;;chrY:234225..234243,+!p1@Kdm5d,p1@LOC100040412!0.24!11.46!Kdm5d;;chr9:21420572..21420591,+!p2@Smarca4!0.24!8.02!Smarca4;;chr7:25039763..25039831,+!p1@Zfp108!0.24!6.87!Zfp108;;chr2:44968721..44968734,-!p6@Zeb2!0.24!5.16!Zeb2;;chr10:127896315..127896333,+!p2@Smarcc2!0.24!3.44!Smarcc2;;chr2:152223783..152223812,-!p4@Sox12!0.24!2.86!Sox12;;chr16:55973899..55973913,+!p7@Rpl24,p7@Zbtb11!0.24!2.86!Zbtb11;;chr19:26681226..26681299,+!p7@Smarca2!0.24!2.86!Smarca2;;chr17:47278081..47278103,+!p1@Trerf1!0.24!2.86!Trerf1;;chr3:8666997..8667012,-!p2@Hey1!0.24!2.86!Hey1;;chr3:30408603..30408668,-!p1@Mecom!0.24!2.86!Mecom;;chr2:48805633..48805648,+!p5@Mbd5!0.24!2.29!Mbd5;;chr13:31717548..31717596,+!p1@Foxf2!0.24!2.29!Foxf2;;chr1:133903955..133903969,+!p10@Elk4!0.24!1.15!Elk4;;chr4:129118044..129118067,-!p1@Zbtb8b!0.24!1.15!Zbtb8b;;chr12:100801928..100801939,-!p6@Foxn3!0.24!1.15!Foxn3;;chr4:149611320..149611348,+!p1@Eno1,p1@Gm5506,p1@LOC100045967,p1@LOC100503183!0.23!66.46!Eno1;;chr3:30993974..30994045,+!p1@Skil!0.23!42.97!Skil;;chr3:133207232..133207277,-!p1@Tet2!0.23!41.82!Tet2;;chr3:103772250..103772317,+!p1@Phtf1!0.23!29.79!Phtf1;;chr18:39650303..39650371,-!p1@Nr3c1!0.23!17.19!Nr3c1;;chr11:120494853..120494905,-!p1@Mafg!0.23!14.32!Mafg;;chr7:28516417..28516460,+!p1@Zfp60!0.23!12.60!Zfp60;;chr7:13551180..13551243,+!p1@Zfp324!0.23!12.03!Zfp324;;chr13:67162067..67162114,-!p1@Zfp712!0.23!9.74!Zfp712;;chr17:37139472..37139514,+!p1@Zfp57!0.23!9.74!Zfp57;;chr7:26067619..26067702,+!p2@Cic!0.23!8.02!Cic;;chrX:71330995..71331011,-!p2@Mecp2!0.23!4.01!Mecp2;;chr1:33871319..33871333,-!p3@Zfp451!0.23!2.86!Zfp451;;chr4:87678743..87678767,-!p7@Mllt3!0.23!2.86!Mllt3;;chr10:85379814..85379844,-!p2@Prdm4!0.23!2.86!Prdm4;;chrX:91368504..91368516,-!p3@Zfx!0.23!2.29!Zfx;;chr7:148513574..148513593,-!p5@Deaf1!0.23!2.29!Deaf1;;chr4:97444563..97444572,+!p12@Nfia!0.23!2.29!Nfia;;chr4:133276779..133276796,-!p8@Arid1a!0.23!2.29!Arid1a;;chr3:19957878..19957885,+!p2@Hltf!0.23!1.15!Hltf;;chr4:61869573..61869595,-!p2@Zfp37!0.23!1.15!Zfp37;;chr6:92041372..92041383,+!p6@Nr2c2!0.23!1.15!Nr2c2;;chr9:71958979..71959032,-!p4@Tcf12!0.23!1.15!Tcf12;;chr7:30553662..30553669,+!p2@Zfp84!0.23!1.15!Zfp84;;chr1:33871240..33871251,-!p5@Zfp451!0.23!1.15!Zfp451;;chr2:115891680..115891701,-!p12@Meis2!0.23!1.15!Meis2;;chr9:21420674..21420725,+!p1@Smarca4!0.22!119.74!Smarca4;;chr3:54611692..54611726,-!p1@Rfxap!0.22!33.80!Rfxap;;chr4:82151274..82151290,-!p3@Nfib!0.22!23.49!Nfib;;chr1:33871361..33871418,-!p1@Zfp451!0.22!19.48!Zfp451;;chr4:97439116..97439202,+!p5@Nfia!0.22!12.60!Nfia;;chr7:24919167..24919203,+!p1@Zfp235!0.22!10.31!Zfp235;;chr7:31741761..31741800,-!p2@LOC100504922,p2@Usf2!0.22!8.59!Usf2;;chr2:44968737..44968758,-!p2@Zeb2!0.22!8.02!Zeb2;;chr2:44965856..44965896,-!p5@Zeb2!0.22!5.16!Zeb2;;chr17:84105477..84105509,+!p3@Mta3!0.22!5.16!Mta3;;chr9:19426741..19426775,+!p2@Zfp317!0.22!4.01!Zfp317;;chr4:133310175..133310212,-!p5@Arid1a!0.22!4.01!Arid1a;;chr5:76733499..76733532,-!p2@Clock!0.22!4.01!Clock;;chr7:16986617..16986632,+!p2@Zc3h4!0.22!3.44!Zc3h4;;chr4:6917921..6917970,-!p2@Tox!0.22!3.44!Tox;;chr3:9610074..9610086,-!p2@Zfp704!0.22!2.86!Zfp704;;chr4:45024965..45025031,-!p3@Zbtb5!0.22!2.86!Zbtb5;;chr12:75009172..75009223,+!p3@Hif1a!0.22!2.86!Hif1a;;chr2:120365588..120365602,-!p2@Zfp106!0.22!1.72!Zfp106;;chr5:22939909..22939948,+!p6@Mll5!0.22!1.15!Mll5;;chr13:23461025..23461086,-!p1@Zfp322a!0.21!34.37!Zfp322a;;chr5:77524250..77524300,-!p1@Hopx!0.21!29.22!Hopx;;chr7:13404186..13404214,-!p1@Zfp329!0.21!28.07!Zfp329;;chr13:55206651..55206701,+!p1@Zfp346!0.21!25.78!Zfp346;;chr6:99470943..99471024,-!p3@Foxp1!0.21!13.18!Foxp1;;chr15:40486566..40486600,+!p1@Zfpm2!0.21!8.02!Zfpm2;;chr1:138521528..138521572,+!p1@Zfp281!0.21!8.02!Zfp281;;chr1:64579555..64579570,+!p3@Creb1!0.21!6.30!Creb1;;chr18:69505414..69505465,+!p6@Tcf4!0.21!4.58!Tcf4;;chr11:101646566..101646603,-!p1@Etv4!0.21!4.01!Etv4;;chr16:42907554..42907591,+!p5@Zbtb20!0.21!2.86!Zbtb20;;chr6:115803317..115803361,-!p2@Mbd4!0.21!2.86!Mbd4;;chr2:48805065..48805076,+!p4@Mbd5!0.21!2.86!Mbd5;;chr15:76709662..76709676,+!p2@Zfp7!0.21!2.29!Zfp7;;chr4:97439519..97439539,+!p11@Nfia!0.21!2.29!Nfia;;chr6:99471044..99471066,-!p4@Foxp1!0.21!2.29!Foxp1;;chr8:4613211..4613224,+!p3@Zfp958!0.21!2.29!Zfp958;;chr18:64499674..64499696,+!p1@Onecut2!0.21!1.72!Onecut2;;chr18:69839537..69839544,+!p13@Tcf4!0.21!1.72!Tcf4;;chr7:52071034..52071052,-!p2@Atf5!0.21!1.15!Atf5;;chr10:41996451..41996462,-!p5@Foxo3!0.21!1.15!Foxo3;;chr13:58503480..58503510,-!p3@Hnrnpk!0.20!73.90!Hnrnpk;;chr5:22940253..22940289,+!p1@Mll5!0.20!71.61!Mll5;;chr3:90097085..90097175,+!p1@Gatad2b!0.20!56.72!Gatad2b;;chr12:41172341..41172385,-!p1@Zfp277!0.20!48.70!Zfp277;;chr14:52899256..52899305,+!p1@Tox4!0.20!36.09!Tox4;;
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=

Revision as of 19:05, 14 May 2012


Name:visual cortex - wildtype, neonate N15, donor3
Species:mus musculus
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Additional information
Sample information
strainNA
tissueVisual cortex
dev stagepostnatal day 15
sexmale
ageP15
cell typemixed
cell lineN/A
companyN/A
collaborationMichela Fagiolini/Alka Saxena/Piero Carninci
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberN/A
catalog numberN/A
sample typeVisual cortex tissue
extraction protocol (Details)Total RNA Trizol Qiagen minElute


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000025 (tube)
0000033 (head)
0000061 (anatomical structure)
0000062 (organ)
0000064 (organ part)
0000073 (regional part of nervous system)
0000153 (anterior region of body)
0000411 (visual cortex)
0000465 (material anatomical entity)
0000467 (anatomical system)
0000468 (multi-cellular organism)
0000475 (organism subdivision)
0000479 (tissue)
0000480 (anatomical group)
0000481 (multi-tissue structure)
0000922 (embryo)
0000923 (germ layer)
0000924 (ectoderm)
0000955 (brain)
0000956 (cerebral cortex)
0001016 (nervous system)
0001017 (central nervous system)
0001049 (neural tube)
0001062 (anatomical entity)
0001869 (cerebral hemisphere)
0001890 (forebrain)
0001893 (telencephalon)
0002050 (embryonic structure)
0002346 (neurectoderm)
0002532 (epiblast (generic))
0002616 (regional part of brain)
0002619 (regional part of cerebral cortex)
0002780 (regional part of forebrain)
0002791 (regional part of telencephalon)
0003056 (pre-chordal neural plate)
0003075 (neural plate)
0003080 (anterior neural tube)
0004121 (ectoderm-derived structure)
0005068 (neural rod)
0005291 (embryonic tissue)
0005423 (developing anatomical structure)
0006598 (presumptive structure)
0007135 (neural keel)
0007284 (presumptive neural plate)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:10237-104A3&oldid=1697236"