Personal tools

FFCP PHASE1:Mm9::chr13:23643531..23643541,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=
|phase1_expression=83.7578470358072,58.2788930757733,40.0399330662792,24.4996011158532,35.5635968261907,417.51574924487,321.684606100039,26.21203465864,5.06839399746,4.44722600011788,12.1564757440109,10.2108363514031,7.19043065711064,6.8187913886818,2259.48351439564,3238.38942663288,4743.72909558696,105.048901064293,103.93274067315,516.482206238203,40.8207792725135,487.91573420115,550.086755926598,135.513582106015,175.268690735318,187.773852265612,277.410725526444,201.034660095934,168.360749638347,284.037956239442,388.693585178749,6838.01029181331,6277.35122208812,3343.96346942576,1147.02978203231,1777.04835888228,1162.33614520167,1929.01228606641,3943.39948381162,2942.72696487672,1751.16513986833,2486.28556524874,1769.68523679855,28.7044744984316,27.4731483604884,27.8991063285756,219.069576417451,298.258413928451,37.7860234303292,35.1918117324453,152.44521315002,135.127410503073,49.4958687870322,48.5992635147601,30.5845357219642,47.3357362306142,47.2780175898949,13.4074743992135,123.210724663495,100.508286061686,136.273751753829,162.306530861114,211.652161474451,75.1416263929968,102.842101706965,100.1776962074,172.86926376912,202.867265209781,283.176331214452,323.744240119394,335.468313355454,94.8361268220628,86.5804680530325,459.340497056078,538.268165238415,432.95204849332,20.9220173898839,15.0671058940522,11.6740965274745,76.6259331712426,63.0349864420603,79.6997456951843,15.6342479440773,16.3201156909187,21.5445529365302,78.3712037359956,70.473981995556,68.5949960637106,10.7531194533121,59.7015324843606,28.1168554040627,24.0918685554788,2.03991400112325,4.85732872474035,12.9955283489534,4.48026887097336,149.432863020184,163.613109674935,276.15252289285,225.430648537597,96.4777425470261,53.8971205140135,5.09610479413291,35.5533351576666,462.424863599953,346.34293610446,382.682004876191,120.578176983327,48.1624463583739,9.79718117827843,396.41397166062,413.464119547888,278.814136182575,145.748793414386,93.4830221728853,36.9459778509246,7.91023896749996,11.8571472674328,770.49579074834,231.164828574848,605.76828513686,891.685590515673,109.971139118692,16.3957246326466,12.5668024088073,104.737392635522,1559.39384544455,2951.52143648757,1573.63769207283,8.38827580667007,18.3000241127451,54.1570257606446,17.3824320192276,11.5071955798649,10.1816141834184,15.0884374653015,178.728083557305,557.218821362607,29.3158399783063,10.7325346502102,386.978197371081,629.242059834415,393.435753624688,316.932231908509,232.480717600087,302.47649359253,288.413908194845,15.0047955028629,550.776221943412,324.31692748781,239.821382235462,288.899975339544,260.25222527516,150.444935937576,150.838305987023,290.390995288182,1737.27542541294,1439.60419239972,921.826392039303,220.796073522845,223.034283042022,211.392860155231,165.958059645232,168.036653912283,187.588809271052,127.428601723224,158.817853628575,96.3314074529148,80.3052067577785,55.8169377868924,12.4845966700618,12.7193989060039,32.9325172936576,27.1096965895951,15.5614561937454,36.0166143327495,10.2429822724977,136.985393531716,377.093626946294,320.022133823684,233.121237531667,168.204059535868,148.770911332218,131.826358896003,121.479439755395,72.7969379880128,94.7533737177016,89.9283253626002,59.4640465713316,79.9949273702257,105.691506388725,83.2410522203255,663.45831753388,380.447546990397,236.686244913469,286.537418278357,229.445792319301,107.728619351529,65.1968697751093,12.989693022205,24.9627977267786,22.5816809976895,7.11486305009157,664.544056067203,706.826146427078,791.73949770707,1044.5267650294,991.479303742186,1408.8448379066,817.057030360302,616.92453787901,646.86668947112,368.046608710028,164.858439817147,87.9946238183061,44.4538825186917,59.9187361163187,14.473305640901,38.4286635546538,571.127115076241,330.818902177313,462.046123480062,427.136251885074,204.860152851341,115.213122188831,34.928922966546,111.605682027183,107.410374479656,41.7771493882616,22.6131374307718,34.0189414275814,49.9039252106215,15.0791283939272,23.3879444042045,65.4046483115318,39.7348914678815,4.81651769963376,5.74337264301796,237.213865960049,48.9793598776484,255.561657727168,257.299132491485,169.538214015713,142.664372377674,113.850122456103,112.381382723166,166.377198388382,102.58180612687,84.9868722585026,14.1381379225595,41.4465048808144,293.274049239969,154.905498345251,28.044920905331,14.6019652173959,593.59865539893,415.090243712603,245.563813842179,197.261664444356,110.984088407758,48.8429474087938,146.140559249957,164.701788813741,78.0610792101465,34.7881408297496,51.5677716240934,14.2984634416591,348.598278044617,345.128968332389,210.478968401024,123.074122147738,177.833711149264,105.969569267766,181.156644723187,113.581106702836,13.5572525352845,9.48272111636336,42.7055395118433,80.409284494561,114.47393151364,141.098110611707,76.3255183814535,79.8657492365791,7.04616147639937,1432.75233548999,521.95238907899,663.922380620416,2600.99165432077,1541.91088869316,1561.18225396131,755.214164462699,735.72478486547,748.21465817715,1.90934123603023,344.173561016275,240.933568545316,251.760449455619,193.615762109398,189.10198020419,141.337835011292,83.9759110169413,37.1693437617322,79.453978627869,23.6108938973032,23.675103424736,249.393598801357,364.8359714579,224.202220160687,406.724284131375,237.214400189053,213.355459857981,116.142311280803,52.0102348351526,36.2376181239009,16.4177103566983,704.072776759581,603.310240703529,562.650623348924,806.938231515085,754.060442151432,708.100348440428,716.965856386614,840.944167732043,921.520788676743,777.766668720928,735.527020573252,677.722102664238,760.554608166804,514.842754109811,17.4582395383713,157.166054988838,211.276132315315,142.198270060374,13.9096507703177,41.1024621238089,25.2749241488826,39.2294133714691,18.5581678493084,24.2843292325339,24.8575627713876,30.9363577257274,38.1514064802986,40.4198686664679,32.4819375877571,33.7511250115903,36.9263386643861,35.7982503097522,32.1011393286128,1058.11200862068,292.884257076357,364.686981890831,331.597562081153,1304.63232419656,370.260826018328,393.376708208859,406.507167932338,370.661687078547,382.078184186862,436.998313010773,385.363615451754,399.568312373988,358.348778010053,331.977010563445,389.608239469554,282.525986653558,270.265817869651,304.11939479284,339.735107670189,487.902946144446,370.569483260697,356.462103971245,406.679273737255,367.967677423943,315.95094586752,309.879986046477,313.052956611033,362.053767513067,342.29678571122,307.739237014108,274.531992380695,253.314015722038,325.832177014086,216.441217520841,179.114184381507,133.574948422328,148.690769401422,80.5323878009831,279.930510862665,319.28200964932
|phase1_expression=83.7578470358072,58.2788930757733,40.0399330662792,24.4996011158532,35.5635968261907,417.51574924487,321.684606100039,26.21203465864,5.06839399746,4.44722600011788,12.1564757440109,10.2108363514031,7.19043065711064,6.8187913886818,2259.48351439564,3238.38942663288,4743.72909558696,105.048901064293,103.93274067315,516.482206238203,40.8207792725135,487.91573420115,550.086755926598,135.513582106015,175.268690735318,187.773852265612,277.410725526444,201.034660095934,168.360749638347,284.037956239442,388.693585178749,6838.01029181331,6277.35122208812,3343.96346942576,1147.02978203231,1777.04835888228,1162.33614520167,1929.01228606641,3943.39948381162,2942.72696487672,1751.16513986833,2486.28556524874,1769.68523679855,28.7044744984316,27.4731483604884,27.8991063285756,219.069576417451,298.258413928451,37.7860234303292,35.1918117324453,152.44521315002,135.127410503073,49.4958687870322,48.5992635147601,30.5845357219642,47.3357362306142,47.2780175898949,13.4074743992135,123.210724663495,100.508286061686,136.273751753829,162.306530861114,211.652161474451,75.1416263929968,102.842101706965,100.1776962074,172.86926376912,202.867265209781,283.176331214452,323.744240119394,335.468313355454,94.8361268220628,86.5804680530325,459.340497056078,538.268165238415,432.95204849332,20.9220173898839,15.0671058940522,11.6740965274745,76.6259331712426,63.0349864420603,79.6997456951843,15.6342479440773,16.3201156909187,21.5445529365302,78.3712037359956,70.473981995556,68.5949960637106,10.7531194533121,59.7015324843606,28.1168554040627,24.0918685554788,2.03991400112325,4.85732872474035,12.9955283489534,4.48026887097336,149.432863020184,163.613109674935,276.15252289285,225.430648537597,96.4777425470261,53.8971205140135,5.09610479413291,35.5533351576666,462.424863599953,346.34293610446,382.682004876191,120.578176983327,48.1624463583739,9.79718117827843,396.41397166062,413.464119547888,278.814136182575,145.748793414386,93.4830221728853,36.9459778509246,7.91023896749996,11.8571472674328,770.49579074834,231.164828574848,605.76828513686,891.685590515673,109.971139118692,16.3957246326466,12.5668024088073,104.737392635522,1559.39384544455,2951.52143648757,1573.63769207283,8.38827580667007,18.3000241127451,54.1570257606446,17.3824320192276,11.5071955798649,10.1816141834184,15.0884374653015,178.728083557305,557.218821362607,29.3158399783063,10.7325346502102,386.978197371081,629.242059834415,393.435753624688,316.932231908509,232.480717600087,302.47649359253,288.413908194845,15.0047955028629,550.776221943412,324.31692748781,239.821382235462,288.899975339544,260.25222527516,150.444935937576,150.838305987023,290.390995288182,1737.27542541294,1439.60419239972,921.826392039303,220.796073522845,223.034283042022,211.392860155231,165.958059645232,168.036653912283,187.588809271052,127.428601723224,158.817853628575,96.3314074529148,80.3052067577785,55.8169377868924,12.4845966700618,12.7193989060039,32.9325172936576,27.1096965895951,15.5614561937454,36.0166143327495,10.2429822724977,136.985393531716,377.093626946294,320.022133823684,233.121237531667,168.204059535868,148.770911332218,131.826358896003,121.479439755395,72.7969379880128,94.7533737177016,89.9283253626002,59.4640465713316,79.9949273702257,105.691506388725,83.2410522203255,663.45831753388,380.447546990397,236.686244913469,286.537418278357,229.445792319301,107.728619351529,65.1968697751093,12.989693022205,24.9627977267786,22.5816809976895,7.11486305009157,664.544056067203,706.826146427078,791.73949770707,1044.5267650294,991.479303742186,1408.8448379066,817.057030360302,616.92453787901,646.86668947112,368.046608710028,164.858439817147,87.9946238183061,44.4538825186917,59.9187361163187,14.473305640901,38.4286635546538,571.127115076241,330.818902177313,462.046123480062,427.136251885074,204.860152851341,115.213122188831,34.928922966546,111.605682027183,107.410374479656,41.7771493882616,22.6131374307718,34.0189414275814,49.9039252106215,15.0791283939272,23.3879444042045,65.4046483115318,39.7348914678815,4.81651769963376,5.74337264301796,237.213865960049,48.9793598776484,255.561657727168,257.299132491485,169.538214015713,142.664372377674,113.850122456103,112.381382723166,166.377198388382,102.58180612687,84.9868722585026,14.1381379225595,41.4465048808144,293.274049239969,154.905498345251,28.044920905331,14.6019652173959,593.59865539893,415.090243712603,245.563813842179,197.261664444356,110.984088407758,48.8429474087938,146.140559249957,164.701788813741,78.0610792101465,34.7881408297496,51.5677716240934,14.2984634416591,348.598278044617,345.128968332389,210.478968401024,123.074122147738,177.833711149264,105.969569267766,181.156644723187,113.581106702836,13.5572525352845,9.48272111636336,42.7055395118433,80.409284494561,114.47393151364,141.098110611707,76.3255183814535,79.8657492365791,7.04616147639937,1432.75233548999,521.95238907899,663.922380620416,2600.99165432077,1541.91088869316,1561.18225396131,755.214164462699,735.72478486547,748.21465817715,1.90934123603023,344.173561016275,240.933568545316,251.760449455619,193.615762109398,189.10198020419,141.337835011292,83.9759110169413,37.1693437617322,79.453978627869,23.6108938973032,23.675103424736,249.393598801357,364.8359714579,224.202220160687,406.724284131375,237.214400189053,213.355459857981,116.142311280803,52.0102348351526,36.2376181239009,16.4177103566983,704.072776759581,603.310240703529,562.650623348924,806.938231515085,754.060442151432,708.100348440428,716.965856386614,840.944167732043,921.520788676743,777.766668720928,735.527020573252,677.722102664238,760.554608166804,514.842754109811,17.4582395383713,157.166054988838,211.276132315315,142.198270060374,13.9096507703177,41.1024621238089,25.2749241488826,39.2294133714691,18.5581678493084,24.2843292325339,24.8575627713876,30.9363577257274,38.1514064802986,40.4198686664679,32.4819375877571,33.7511250115903,36.9263386643861,35.7982503097522,32.1011393286128,1058.11200862068,292.884257076357,364.686981890831,331.597562081153,1304.63232419656,370.260826018328,393.376708208859,406.507167932338,370.661687078547,382.078184186862,436.998313010773,385.363615451754,399.568312373988,358.348778010053,331.977010563445,389.608239469554,282.525986653558,270.265817869651,304.11939479284,339.735107670189,487.902946144446,370.569483260697,356.462103971245,406.679273737255,367.967677423943,315.95094586752,309.879986046477,313.052956611033,362.053767513067,342.29678571122,307.739237014108,274.531992380695,253.314015722038,325.832177014086,216.441217520841,179.114184381507,133.574948422328,148.690769401422,80.5323878009831,279.930510862665,319.28200964932
|short_description=p4@Hist1h4a,p4@Hist1h4c,p4@Hist1h4d,p4@Hist1h4f,p4@Hist1h4h,p4@Hist1h4i,p4@Hist1h4j,p4@Hist1h4k,p4@Hist1h4m,p4@Hist1h4n,p4@Hist4h4,p5@Hist1h4b,p5@Hist2h4
|short_description=p4@Hist1h4a,p4@Hist1h4c,p4@Hist1h4d,p4@Hist1h4f,p4@Hist1h4h,p4@Hist1h4i,p4@Hist1h4j,p4@Hist1h4k,p4@Hist1h4m,p4@Hist1h4n,p4@Hist4h4,p5@Hist1h4b,p5@Hist2h4
}}
}}

Revision as of 18:48, 18 April 2012

Short description:p4@Hist1h4a, p4@Hist1h4c, p4@Hist1h4d, p4@Hist1h4f, p4@Hist1h4h, p4@Hist1h4i, p4@Hist1h4j, p4@Hist1h4k, p4@Hist1h4m, p4@Hist1h4n, p4@Hist4h4, p5@Hist1h4b, p5@Hist2h4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hist1h4a_5end, CAGE_peak_4_at_Hist1h4c_5end, CAGE_peak_4_at_Hist1h4d_5end, CAGE_peak_4_at_Hist1h4f_5end, CAGE_peak_4_at_Hist1h4h_5end, CAGE_peak_4_at_Hist1h4i_5end, CAGE_peak_4_at_Hist1h4j_5end, CAGE_peak_4_at_Hist1h4k_5end, CAGE_peak_4_at_Hist1h4m_5end, CAGE_peak_4_at_Hist1h4n_5end, CAGE_peak_4_at_Hist4h4_5end, CAGE_peak_5_at_Hist1h4b_5end, CAGE_peak_5_at_Hist2h4_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000102971_5end
EntrezGene:100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hist1h4ap4@Hist1h4cp4@Hist1h4dp4@Hist1h4fp4@Hist1h4hp4@Hist1h4ip4@Hist1h4jp4@Hist1h4kp4@Hist1h4mp4@Hist1h4np4@Hist4h4p5@Hist1h4bp5@Hist2h4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G783.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I558.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.04
CD326+ enterocyte, pool1.CNhs13542.11848-124I324.50
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7417.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8321.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.82
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12259.48
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33238.39
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54743.73
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2105.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4103.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6516.48
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2487.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9550.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1135.51
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2175.27
GP2+ M cell, pool1.CNhs13228.11845-124H9187.77
GP2+ M cell, pool2.CNhs13231.11846-124I1277.41
GP2+ M cell, pool3.CNhs13240.11847-124I2201.03
Ileum epithelium, pool1.CNhs13199.10252-104B9168.36
Ileum epithelium, pool2.CNhs13232.10253-104C1284.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8388.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36838.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66277.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E93343.96
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51147.03
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61777.05
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71162.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81929.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13943.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32942.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91751.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22486.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41769.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.90
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7219.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2298.26
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B837.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C4152.45
Mouse Astrocytes, donor3.CNhs12107.11633-122C4135.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A249.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I948.60
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.58
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C147.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E147.28
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C3123.21
Mouse Granule cells, donor2.CNhs12357.11731-123E3100.51
Mouse Granule cells, donor3.CNhs12108.11636-122C7136.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6162.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1211.65
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C775.14
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7102.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2100.18
Mouse Microglia, donor1.CNhs12629.11718-123C8172.87
Mouse Microglia, donor2.CNhs12634.11736-123E8202.87
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5283.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5323.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9335.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F194.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D586.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2459.34
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2538.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6432.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D476.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D879.70
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D678.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F670.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E168.59
Mouse Schwann, donor1.CNhs12507.11728-123D910.75
Mouse Schwann, donor2.CNhs12573.11746-123F959.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7149.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7163.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3276.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8225.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G696.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H153.90
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1462.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2346.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3382.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6120.58
accessory axillary lymph node, adult.CNhs10475.1063-29H948.16
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C5396.41
adrenal gland, embryo E16.CNhs11004.1254-43D6413.46
adrenal gland, embryo E17.CNhs11043.1263-45I1278.81
adrenal gland, embryo E18.CNhs11026.1262-18F5145.75
adrenal gland, neonate N00.CNhs11191.1311-23C193.48
adrenal gland, neonate N25.CNhs11223.1377-27I336.95
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H111.86
bone (os femoris), adult.CNhs10483.56-12G2770.50
bone (os femoris), neonate N02.CNhs11227.1985-43F5231.16
bone (os femoris), neonate N16.CNhs11225.1525-43A6605.77
bone (os femoris), neonate N20.CNhs11195.1350-25C3891.69
cecum, adult.CNhs10467.37-13H4109.97
cerebellum, adult.CNhs10494.15-8B216.40
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H7104.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71559.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12951.52
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41573.64
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F154.16
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B215.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1178.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2557.22
epididymis, adult.CNhs10490.58-23B229.32
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C6386.98
eyeball, embryo E14.CNhs10521.399-16E2629.24
eyeball, embryo E15.CNhs10593.426-16C9393.44
eyeball, embryo E17.CNhs11023.1261-18D4316.93
eyeball, neonate N00.CNhs11207.633-15C6232.48
eyeball, neonate N01.CNhs11140.1532-43E7302.48
eyeball, neonate N02.CNhs11205.1551-44G8288.41
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E2550.78
forelimb, embryo E12.CNhs10600.359-14H2324.32
forelimb, embryo E13.CNhs10589.384-1E2239.82
forelimb, embryo E14.CNhs10577.413-26A8288.90
forelimb, embryo E15.CNhs11007.437-20E7260.25
forelimb, embryo E17.CNhs10598.1517-43C4150.44
forelimb, embryo E18.CNhs11008.1520-43B5150.84
gonad, embryo E13.CNhs11044.1564-45I6290.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81737.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21439.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5921.83
heart, embryo E11.CNhs10586.331-24E9220.80
heart, embryo E12.CNhs11015.353-12F5223.03
heart, embryo E13.CNhs11013.376-3I9211.39
heart, embryo E14.CNhs10597.403-26D4165.96
heart, embryo E15.CNhs11017.431-16C8168.04
heart, embryo E16.CNhs11021.457-17C6187.59
heart, embryo E17.CNhs11025.479-18E5127.43
heart, embryo E18.CNhs11030.1283-20G3158.82
heart, neonate N00.CNhs11213.639-21E396.33
heart, neonate N03.CNhs11221.1349-25I280.31
heart, neonate N10.CNhs11118.749-24G155.82
heart, neonate N16.CNhs11209.782-15G112.48
heart, neonate N20.CNhs11127.821-26I612.72
heart, neonate N25.CNhs11196.1351-25D332.93
heart, neonate N30.CNhs11202.1390-42D227.11
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G136.02
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A3136.99
intestine, embryo E12.CNhs11019.1251-16I5377.09
intestine, embryo E13.CNhs11010.381-16D5320.02
intestine, embryo E15.CNhs10602.976-16D8233.12
intestine, embryo E16.CNhs10585.463-22H4168.20
intestine, embryo E17.CNhs10582.482-18D3148.77
intestine, embryo E18.CNhs10526.1289-20F7131.83
intestine, neonate N00.CNhs11126.644-26D1121.48
intestine, neonate N01.CNhs11192.1322-23E972.80
intestine, neonate N06.CNhs11102.688-20B894.75
intestine, neonate N07.CNhs11095.720-20F289.93
intestine, neonate N10.CNhs11098.755-23A559.46
intestine, neonate N20.CNhs11187.827-18D179.99
intestine, neonate N25.CNhs11121.1352-25E3105.69
intestine, neonate N30.CNhs11131.1384-42G183.24
kidney, embryo E14.CNhs10606.411-4I9663.46
kidney, embryo E15.CNhs10997.434-16F8380.45
kidney, embryo E16.CNhs10584.464-22A5236.69
kidney, embryo E17.CNhs11028.483-18I2286.54
kidney, embryo E18.CNhs11001.1288-20C7229.45
kidney, neonate N00.CNhs11214.646-21G7107.73
kidney, neonate N10.CNhs11206.758-6D565.20
kidney, neonate N20.CNhs11113.832-19I112.99
kidney, neonate N25.CNhs11122.1353-25F324.96
kidney, neonate N30.CNhs11203.1385-42H122.58
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F8664.54
liver, embryo E13.CNhs10524.378-3H6706.83
liver, embryo E14.CNhs10594.409-16E1791.74
liver, embryo E15.CNhs10520.433-16D71044.53
liver, embryo E16.CNhs10523.462-17F5991.48
liver, embryo E17.CNhs10510.481-18A31408.84
liver, embryo E18.CNhs10579.499-43G4817.06
liver, neonate N00.CNhs11117.641-24F4616.92
liver, neonate N03.CNhs11123.1345-25G2646.87
liver, neonate N06.CNhs11101.684-20A8368.05
liver, neonate N07.CNhs11103.716-20H2164.86
liver, neonate N10.CNhs11115.751-24B987.99
liver, neonate N20.CNhs11220.823-25A344.45
liver, neonate N25.CNhs11198.1368-26H159.92
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B138.43
lung, embryo E12.CNhs10522.354-16G2571.13
lung, embryo E14.CNhs10604.404-26F8330.82
lung, embryo E15.CNhs11020.432-17C5462.05
lung, embryo E16.CNhs10998.458-17B6427.14
lung, embryo E17.CNhs10605.480-44A6204.86
lung, embryo E18.CNhs10583.1287-20I6115.21
lung, neonate N00.CNhs11224.640-42C634.93
lung, neonate N06.CNhs11212.683-20E5111.61
lung, neonate N07.CNhs11111.715-19A3107.41
lung, neonate N10.CNhs11219.750-23E641.78
lung, neonate N20.CNhs11109.822-18A422.61
lung, neonate N25.CNhs11119.1359-25C734.02
lung, neonate N30.CNhs11133.1394-42H249.90
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B665.40
mammary gland, adult pregnant day19.CNhs10476.588-5H239.73
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7237.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C248.98
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1255.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2257.30
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3169.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7142.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8113.85
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9112.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4166.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5102.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D684.99
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I741.45
ovary, embryo E18.CNhs11040.505-44H7293.27
ovary, neonate N00.CNhs11217.1299-22I4154.91
oviduct, adult pregnant day01.CNhs10500.988-6G628.04
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F4593.60
pancreas, embryo E15.CNhs11042.1556-45F2415.09
pancreas, embryo E16.CNhs11003.460-26E5245.56
pancreas, embryo E17.CNhs10599.1558-45G3197.26
pancreas, embryo E18.CNhs10580.1535-43I7110.98
pancreas, neonate N00.CNhs11105.645-26G948.84
pancreas, neonate N01.CNhs11138.1531-43D7146.14
pancreas, neonate N02.CNhs11139.1539-43D8164.70
pancreas, neonate N16.CNhs11136.787-43B678.06
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H551.57
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E6348.60
pituitary gland, embryo E13.CNhs11009.370-44C7345.13
pituitary gland, embryo E14.CNhs11037.398-44A5210.48
pituitary gland, embryo E15.CNhs10592.427-16B9123.07
pituitary gland, embryo E16.CNhs11036.449-43F6177.83
pituitary gland, embryo E17.CNhs11039.1265-44F5105.97
pituitary gland, neonate N00.CNhs11190.1308-22E9181.16
placenta, adult pregnant day10.CNhs10472.539-13I7113.58
placenta, adult pregnant day17.CNhs10464.577-18G313.56
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C342.71
skin, neonate N00.CNhs11124.650-25G480.41
skin, neonate N03.CNhs11215.662-22H3114.47
skin, neonate N06.CNhs11097.693-20I5141.10
skin, neonate N10.CNhs11108.762-6C476.33
small intestine, neonate N16.CNhs11114.790-21I179.87
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G21432.75
spleen, embryo E16.CNhs11035.461-43C1521.95
spleen, embryo E18.CNhs11011.1271-21F2663.92
spleen, neonate N10.CNhs11116.752-24D12600.99
spleen, neonate N20.CNhs11112.824-19H11541.91
spleen, neonate N25.CNhs11099.1354-25G31561.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6755.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9735.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3748.21
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E3344.17
stomach, embryo E15.CNhs10603.1252-16G8240.93
stomach, embryo E16.CNhs11022.459-17D4251.76
stomach, embryo E17.CNhs11006.1035-18D5193.62
stomach, embryo E18.CNhs10999.1286-20C6189.10
stomach, neonate N03.CNhs11193.1340-24B8141.34
stomach, neonate N07.CNhs11210.718-18A983.98
stomach, neonate N25.CNhs11104.1355-25E437.17
stomach, neonate N30.CNhs11134.1386-42I179.45
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F5249.39
testis, embryo E15.CNhs11034.443-27C5364.84
testis, embryo E16.CNhs11033.470-26G5224.20
testis, embryo E17.CNhs11029.486-18I5406.72
testis, embryo E18.CNhs11027.503-18G5237.21
testis, neonate N00.CNhs11189.1300-22B7213.36
testis, neonate N07.CNhs11222.726-26I4116.14
testis, neonate N10.CNhs11204.763-44D952.01
testis, neonate N20.CNhs11110.839-18H336.24
testis, neonate N30.CNhs11130.1391-42E216.42
thymus, adult.CNhs10471.38-12B5704.07
thymus, embryo E14.CNhs11041.402-44I4603.31
thymus, embryo E15.CNhs11005.430-45I2562.65
thymus, embryo E16.CNhs11002.456-26C5806.94
thymus, embryo E17.CNhs10581.478-18C1754.06
thymus, embryo E18.CNhs10595.1273-19G4708.10
thymus, neonate N02.CNhs11181.1541-43F8716.97
thymus, neonate N03.CNhs11137.2104-43C7840.94
thymus, neonate N06.CNhs11197.681-26C4921.52
thymus, neonate N07.CNhs11211.713-19D3777.77
thymus, neonate N10.CNhs11194.748-24E4735.53
thymus, neonate N20.CNhs11186.820-7A2677.72
thymus, neonate N25.CNhs11125.1362-25G7760.55
thymus, neonate N30.CNhs11132.1393-42G2514.84
tongue, adult.CNhs10499.32-1B417.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3157.17
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7211.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5142.20
urinary bladder, adult.CNhs10481.879-12E413.91
uterus, adult pregnant day19.CNhs10497.590-15F541.10
uterus, adult.CNhs10509.92-27E525.27
vagina, adult.CNhs10502.89-27D539.23
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A440.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I81058.11
whole body, embryo E12.CNhs10587.857-27C9292.88
whole body, embryo E13.CNhs10512.372-23H2364.69
whole body, embryo E14.5.CNhs10578.420-27D2331.60
whole body, embryo E14.CNhs10519.395-14B11304.63
whole body, embryo E16.CNhs10514.453-14F2370.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5393.38
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5406.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5370.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5382.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5437.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5385.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5399.57
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5358.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5331.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5389.61
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5282.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5270.27
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5304.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5339.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5487.90
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5370.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5356.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5406.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5367.97
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5315.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5309.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5313.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5362.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5342.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5307.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5274.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5253.31
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5325.83
whole body, embryo E17.5.CNhs10513.490-9F9216.44
whole body, embryo E17.CNhs10517.475-3I5179.11
whole body, embryo E18.CNhs10516.493-3B3133.57
whole body, neonate N00.CNhs10525.657-19C2148.69
whole body, neonate N01.CNhs10576.659-23C680.53
whole body, neonate N06.CNhs10515.692-21D1279.93
whole body, neonate N10.CNhs10518.761-6B4319.28





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:23643531..23643541,-&oldid=934315"