Personal tools

FFCP PHASE1:Mm9::chr1:59741793..59741867,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Nop58_5end
|description=CAGE_peak_1_at_Nop58_5end
|id=chr1:59741793..59741867,+
|id=chr1:59741793..59741867,+
|ontology_enrichment_celltype=CL:0000988!1.54e-08!32;CL:0002032!1.54e-08!32;CL:0000037!1.54e-08!32;CL:0000566!1.54e-08!32;CL:0000837!1.54e-08!32;CL:0000542!6.54e-08!13;CL:0000051!6.54e-08!13;CL:0000838!1.85e-07!12;CL:0000084!5.72e-07!11;CL:0000827!5.72e-07!11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=80.7150189408162,27.9180326111489,18.1999695755814,16.6355316218757,16.5295590882295,102.406355866253,94.8467320817834,110.787811512872,544.993143449102,509.324409276658,538.309292100988,511.818172114078,121.552518251156,119.41626970435,156.561588053361,160.967837574912,137.813689991245,99.528313170524,95.7058746568057,71.2974615020691,55.0230087277421,138.908040730039,186.757849234339,71.996590257033,62.6287337313374,41.3447014162815,49.1068675621345,63.1330711769655,44.6555035722479,50.4060259519862,76.4970261760801,146.692085569175,129.16360539276,47.5445043046316,129.405525648571,151.273527276228,159.45626724091,23.4377713212668,24.2213956802378,34.5525671022707,22.9410280332096,15.7100461540443,18.934903768215,92.030573940147,74.7147983087822,83.6973189857268,15.6478268869608,15.0437357902508,5.93152693383074,10.6936444490856,9.79904951377538,4.31257693094915,144.293041209653,115.332580579804,153.594866208106,72.0326420900652,42.1204156709972,41.2537673821954,30.3474691289397,26.4495489636016,20.9164363157039,17.2810711355257,14.2287167377782,5.84934816232909,6.92206453796882,14.9200824138681,7.19040265244171,9.98967593836042,47.0750839880489,32.2664192612741,44.1682418837902,23.4233807211119,22.7494597180162,47.7714116938321,27.8910320663068,43.203282970671,39.6417171597799,33.9648319306599,35.0222895824235,21.761237475482,28.0867065859398,34.3802824567462,19.2636269310953,31.5147061617741,40.6443339086315,54.5062883126285,54.2436103844582,52.0054453852589,158.192017873021,72.3219830221937,173.628828732305,46.4628893569949,106.755499392117,27.5248627735287,33.1385972898311,41.6665005000522,44.9422144421606,87.0898948373875,63.3877851231,67.1345191569646,65.2105033566031,101.377917157311,101.922095882658,71.1066703153331,103.049735521338,106.157783634066,114.754049018356,49.441619918353,136.201326798412,48.3921373351329,105.305593347044,79.4654898394689,84.6358874929735,78.2250504468111,73.3753532526798,44.6116399220348,47.4614338049998,48.1515858543306,47.7689698052932,83.1481608729683,71.7734934996279,64.9732839201198,61.5092812019803,40.110969190582,34.977600037847,53.3905245385956,277.012567857688,205.766636730739,239.781518486873,46.2853075760902,45.7500602818627,76.6491547888473,40.1534179644159,39.8916113435316,39.4797284663164,36.0175604010422,81.6751698079537,47.8966836848858,38.6665820403522,35.3542317889276,126.08670923086,100.007415428561,100.29460630158,86.8059750733719,88.5835218950289,94.8041530107888,79.6464658757695,49.153640440413,92.0475329823236,122.729846028915,106.098527870861,91.6238161547263,91.4775449952217,74.1777114692215,85.8111508821124,111.459189418356,252.796747432765,224.407375004032,167.088137644608,118.890193435378,106.709357291399,100.474630295246,91.6202126714764,82.2474488704148,82.9957067334095,75.5735320438826,67.0683503499048,61.5353354274983,70.4316157629696,46.9518947266212,34.0489000092594,32.7487971832744,38.860370406516,25.633425983231,50.8901675525188,80.7801207177383,13.2167513193519,78.2773677324091,136.50448034255,117.047282617661,125.259172405075,100.035028213178,72.7176203372726,67.3398716438459,49.3510224006292,60.444516383712,50.0157065512536,48.9432921221231,60.4388670069272,49.4350674759822,51.8731319699266,45.8024928485045,50.2619937525666,124.073884694165,87.9120338250027,90.4211895633195,87.2786192254316,83.5317614893694,50.9686489221514,33.0646731474309,32.1847392074818,26.9005817349525,55.1401886382097,175.354206107615,175.920300626317,153.131098534085,124.758974653929,110.459139166607,99.0494563429723,75.0886918746616,115.92668714415,81.5447397168602,162.458073375911,59.5425516269605,62.0954969497976,62.3869828529366,65.6594533490199,29.9114983245288,33.2555742299888,134.159919533503,143.409179268983,119.670285471508,108.192204460999,71.5251719276553,43.8000299230265,39.6121305151332,61.1624359132021,51.8227373778133,46.4013376793287,30.8063031665587,37.990696010497,23.8670946659494,27.142431109069,33.72215239676,67.863469676627,70.6398070540115,34.1972756673997,35.0462942910687,180.164504968966,25.4995636476417,100.962630213202,112.055919613135,68.9354872744957,94.392675191258,85.5546908476393,75.2983571898294,102.012296822073,86.7999897996596,72.7329511421603,35.9879874392424,75.3701852455906,57.6932555881907,81.2805927174345,65.4931388200966,53.0980553359851,120.904756805181,113.975980975711,111.842812295248,57.2885672188699,94.0751552708418,78.8206294163074,104.697714089522,98.3932764341831,113.141159341022,71.6846538309992,49.5050607591297,66.3857231219887,104.43543453816,31.0460841078611,71.5885697005518,74.1282176624703,64.2127743367454,63.5159219524187,26.1839856238555,79.0843656174704,49.9923687238616,55.3526279117954,83.9271027472133,85.7376105755258,102.290720678152,85.1124812742363,108.33299383174,53.0495122666328,36.5287844960704,91.2450503460533,87.5080320164063,124.265527865077,119.613970197979,110.585630226309,105.009181501794,238.649715711373,251.212856920966,216.282959003923,58.2349076989219,137.289821214213,115.892096262304,104.765180597147,89.9079672862215,81.2308737135781,72.1524253158791,69.8421700879089,47.6395814410934,57.4194331682642,31.6883049674332,164.598338095784,125.89293176903,100.102386726544,91.9754120867345,90.1535567874563,106.611315184681,101.748725905869,107.028004341727,100.664970648682,114.752457392353,134.798042928681,83.1109247252109,101.565332860372,129.415806027682,161.881345430333,140.894009490308,120.599582352228,123.921508455088,118.594690321185,143.978157626059,124.902956107545,107.581539541009,93.7544812716418,104.197424496477,68.2561108740363,48.0668413264248,190.463947994947,284.0340700256,215.563847411477,47.3314505378867,45.9822064855396,97.9861189829868,98.6094543763703,44.6399172591473,59.8636953174091,59.842280745933,56.1437603170609,50.3529824267005,45.900528824633,56.6545423042275,45.226507515531,33.7740902418165,48.0330953523257,42.4563455636492,148.519694392957,100.55426809706,94.2449503762821,99.4306472809323,108.160391916039,92.4732847503571,81.5645491031928,89.4192148416801,78.6252063499947,74.5456774703203,84.1551275635596,77.7140526510634,80.6253379315688,77.6625098671064,77.3655766832111,83.3513959745379,77.6424983830532,77.9353250673368,78.2963211526283,87.5833574799664,84.3458360868122,79.5091611593832,82.2604855318257,90.8415103952053,89.5921301553947,87.6607337757769,78.6590283352922,84.7084470829854,80.3960353967502,72.948495315506,76.282316653844,77.621532111944,86.3477501088044,76.0739890223093,69.8321931751732,45.9651463405821,68.0740980576138,64.0315741063929,52.2217146547942,50.9566178166081,70.7196898642285
|phase1_expression=80.7150189408162,27.9180326111489,18.1999695755814,16.6355316218757,16.5295590882295,102.406355866253,94.8467320817834,110.787811512872,544.993143449102,509.324409276658,538.309292100988,511.818172114078,121.552518251156,119.41626970435,156.561588053361,160.967837574912,137.813689991245,99.528313170524,95.7058746568057,71.2974615020691,55.0230087277421,138.908040730039,186.757849234339,71.996590257033,62.6287337313374,41.3447014162815,49.1068675621345,63.1330711769655,44.6555035722479,50.4060259519862,76.4970261760801,146.692085569175,129.16360539276,47.5445043046316,129.405525648571,151.273527276228,159.45626724091,23.4377713212668,24.2213956802378,34.5525671022707,22.9410280332096,15.7100461540443,18.934903768215,92.030573940147,74.7147983087822,83.6973189857268,15.6478268869608,15.0437357902508,5.93152693383074,10.6936444490856,9.79904951377538,4.31257693094915,144.293041209653,115.332580579804,153.594866208106,72.0326420900652,42.1204156709972,41.2537673821954,30.3474691289397,26.4495489636016,20.9164363157039,17.2810711355257,14.2287167377782,5.84934816232909,6.92206453796882,14.9200824138681,7.19040265244171,9.98967593836042,47.0750839880489,32.2664192612741,44.1682418837902,23.4233807211119,22.7494597180162,47.7714116938321,27.8910320663068,43.203282970671,39.6417171597799,33.9648319306599,35.0222895824235,21.761237475482,28.0867065859398,34.3802824567462,19.2636269310953,31.5147061617741,40.6443339086315,54.5062883126285,54.2436103844582,52.0054453852589,158.192017873021,72.3219830221937,173.628828732305,46.4628893569949,106.755499392117,27.5248627735287,33.1385972898311,41.6665005000522,44.9422144421606,87.0898948373875,63.3877851231,67.1345191569646,65.2105033566031,101.377917157311,101.922095882658,71.1066703153331,103.049735521338,106.157783634066,114.754049018356,49.441619918353,136.201326798412,48.3921373351329,105.305593347044,79.4654898394689,84.6358874929735,78.2250504468111,73.3753532526798,44.6116399220348,47.4614338049998,48.1515858543306,47.7689698052932,83.1481608729683,71.7734934996279,64.9732839201198,61.5092812019803,40.110969190582,34.977600037847,53.3905245385956,277.012567857688,205.766636730739,239.781518486873,46.2853075760902,45.7500602818627,76.6491547888473,40.1534179644159,39.8916113435316,39.4797284663164,36.0175604010422,81.6751698079537,47.8966836848858,38.6665820403522,35.3542317889276,126.08670923086,100.007415428561,100.29460630158,86.8059750733719,88.5835218950289,94.8041530107888,79.6464658757695,49.153640440413,92.0475329823236,122.729846028915,106.098527870861,91.6238161547263,91.4775449952217,74.1777114692215,85.8111508821124,111.459189418356,252.796747432765,224.407375004032,167.088137644608,118.890193435378,106.709357291399,100.474630295246,91.6202126714764,82.2474488704148,82.9957067334095,75.5735320438826,67.0683503499048,61.5353354274983,70.4316157629696,46.9518947266212,34.0489000092594,32.7487971832744,38.860370406516,25.633425983231,50.8901675525188,80.7801207177383,13.2167513193519,78.2773677324091,136.50448034255,117.047282617661,125.259172405075,100.035028213178,72.7176203372726,67.3398716438459,49.3510224006292,60.444516383712,50.0157065512536,48.9432921221231,60.4388670069272,49.4350674759822,51.8731319699266,45.8024928485045,50.2619937525666,124.073884694165,87.9120338250027,90.4211895633195,87.2786192254316,83.5317614893694,50.9686489221514,33.0646731474309,32.1847392074818,26.9005817349525,55.1401886382097,175.354206107615,175.920300626317,153.131098534085,124.758974653929,110.459139166607,99.0494563429723,75.0886918746616,115.92668714415,81.5447397168602,162.458073375911,59.5425516269605,62.0954969497976,62.3869828529366,65.6594533490199,29.9114983245288,33.2555742299888,134.159919533503,143.409179268983,119.670285471508,108.192204460999,71.5251719276553,43.8000299230265,39.6121305151332,61.1624359132021,51.8227373778133,46.4013376793287,30.8063031665587,37.990696010497,23.8670946659494,27.142431109069,33.72215239676,67.863469676627,70.6398070540115,34.1972756673997,35.0462942910687,180.164504968966,25.4995636476417,100.962630213202,112.055919613135,68.9354872744957,94.392675191258,85.5546908476393,75.2983571898294,102.012296822073,86.7999897996596,72.7329511421603,35.9879874392424,75.3701852455906,57.6932555881907,81.2805927174345,65.4931388200966,53.0980553359851,120.904756805181,113.975980975711,111.842812295248,57.2885672188699,94.0751552708418,78.8206294163074,104.697714089522,98.3932764341831,113.141159341022,71.6846538309992,49.5050607591297,66.3857231219887,104.43543453816,31.0460841078611,71.5885697005518,74.1282176624703,64.2127743367454,63.5159219524187,26.1839856238555,79.0843656174704,49.9923687238616,55.3526279117954,83.9271027472133,85.7376105755258,102.290720678152,85.1124812742363,108.33299383174,53.0495122666328,36.5287844960704,91.2450503460533,87.5080320164063,124.265527865077,119.613970197979,110.585630226309,105.009181501794,238.649715711373,251.212856920966,216.282959003923,58.2349076989219,137.289821214213,115.892096262304,104.765180597147,89.9079672862215,81.2308737135781,72.1524253158791,69.8421700879089,47.6395814410934,57.4194331682642,31.6883049674332,164.598338095784,125.89293176903,100.102386726544,91.9754120867345,90.1535567874563,106.611315184681,101.748725905869,107.028004341727,100.664970648682,114.752457392353,134.798042928681,83.1109247252109,101.565332860372,129.415806027682,161.881345430333,140.894009490308,120.599582352228,123.921508455088,118.594690321185,143.978157626059,124.902956107545,107.581539541009,93.7544812716418,104.197424496477,68.2561108740363,48.0668413264248,190.463947994947,284.0340700256,215.563847411477,47.3314505378867,45.9822064855396,97.9861189829868,98.6094543763703,44.6399172591473,59.8636953174091,59.842280745933,56.1437603170609,50.3529824267005,45.900528824633,56.6545423042275,45.226507515531,33.7740902418165,48.0330953523257,42.4563455636492,148.519694392957,100.55426809706,94.2449503762821,99.4306472809323,108.160391916039,92.4732847503571,81.5645491031928,89.4192148416801,78.6252063499947,74.5456774703203,84.1551275635596,77.7140526510634,80.6253379315688,77.6625098671064,77.3655766832111,83.3513959745379,77.6424983830532,77.9353250673368,78.2963211526283,87.5833574799664,84.3458360868122,79.5091611593832,82.2604855318257,90.8415103952053,89.5921301553947,87.6607337757769,78.6590283352922,84.7084470829854,80.3960353967502,72.948495315506,76.282316653844,77.621532111944,86.3477501088044,76.0739890223093,69.8321931751732,45.9651463405821,68.0740980576138,64.0315741063929,52.2217146547942,50.9566178166081,70.7196898642285
|short_description=p1@Nop58
|short_description=p1@Nop58
}}
}}

Revision as of 13:42, 18 April 2012

Short description:p1@Nop58
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nop58_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027174, NM_018868, uc007bdy.1_5end
EntrezGene:Nop58
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nop58

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G780.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I527.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7102.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I894.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9110.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7544.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2509.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6538.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1511.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4121.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8119.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1156.56
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3160.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5137.81
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A299.53
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A495.71
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A671.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A355.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2138.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9186.76
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D172.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D262.63
GP2+ M cell, pool1.CNhs13228.11845-124H941.34
GP2+ M cell, pool2.CNhs13231.11846-124I149.11
GP2+ M cell, pool3.CNhs13240.11847-124I263.13
Ileum epithelium, pool1.CNhs13199.10252-104B944.66
Ileum epithelium, pool2.CNhs13232.10253-104C150.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C876.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3146.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6129.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5129.41
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6151.27
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7159.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D892.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D974.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B383.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.04
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2144.29
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9115.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1153.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C172.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E142.12
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C541.25
Mouse Granule cells, donor1.CNhs12131.11713-123C330.35
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D944.17
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D654.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.01
Mouse Schwann, donor1.CNhs12507.11728-123D9158.19
Mouse Schwann, donor2.CNhs12573.11746-123F972.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3173.63
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C4106.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F641.67
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A744.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I787.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E363.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I867.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G665.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1101.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8101.92
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1103.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2106.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3114.75
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B649.44
accessory axillary lymph node, adult.CNhs10475.1063-29H9136.20
adrenal gland, adult.CNhs10508.49-24D748.39
adrenal gland, embryo E14.CNhs11038.406-44C5105.31
adrenal gland, embryo E16.CNhs11004.1254-43D679.47
adrenal gland, embryo E17.CNhs11043.1263-45I184.64
adrenal gland, embryo E18.CNhs11026.1262-18F578.23
adrenal gland, neonate N00.CNhs11191.1311-23C173.38
adrenal gland, neonate N25.CNhs11223.1377-27I344.61
amnion, adult pregnant day17.5.CNhs10488.583-22A847.46
aorta, adult.CNhs10498.46-23H148.15
bone (os femoris), adult.CNhs10483.56-12G247.77
bone (os femoris), neonate N02.CNhs11227.1985-43F583.15
bone (os femoris), neonate N16.CNhs11225.1525-43A671.77
bone (os femoris), neonate N20.CNhs11195.1350-25C364.97
cecum, adult.CNhs10467.37-13H461.51
cerebellum, adult.CNhs10494.15-8B240.11
cerebellum, neonate N30.CNhs11135.1395-42I234.98
colon, adult.CNhs10468.36-18H753.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7277.01
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1205.77
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4239.78
corpora quadrigemina, adult.CNhs10501.16-22A446.29
corpus striatum, adult.CNhs10487.19-21D845.75
corpus striatum, neonate N00.CNhs11226.630-43F176.65
cortex, adult.CNhs10473.12-14D540.15
cortex, neonate N30.CNhs11107.1392-42F239.89
diencephalon, adult.CNhs10482.20-12F239.48
diencephalon, neonate N30.CNhs11201.1388-42B236.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B181.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A247.90
epididymis, adult.CNhs10490.58-23B238.67
eyeball, adult.CNhs10484.31-12G435.35
eyeball, embryo E12.CNhs11016.345-16C6126.09
eyeball, embryo E14.CNhs10521.399-16E2100.01
eyeball, embryo E15.CNhs10593.426-16C9100.29
eyeball, embryo E17.CNhs11023.1261-18D486.81
eyeball, neonate N00.CNhs11207.633-15C688.58
eyeball, neonate N01.CNhs11140.1532-43E794.80
eyeball, neonate N02.CNhs11205.1551-44G879.65
eyeball, neonate N16.CNhs11188.777-19A249.15
forelimb, embryo E11.CNhs10596.335-25E292.05
forelimb, embryo E12.CNhs10600.359-14H2122.73
forelimb, embryo E13.CNhs10589.384-1E2106.10
forelimb, embryo E14.CNhs10577.413-26A891.62
forelimb, embryo E15.CNhs11007.437-20E791.48
forelimb, embryo E17.CNhs10598.1517-43C474.18
forelimb, embryo E18.CNhs11008.1520-43B585.81
gonad, embryo E13.CNhs11044.1564-45I6111.46
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8252.80
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2224.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5167.09
heart, embryo E11.CNhs10586.331-24E9118.89
heart, embryo E12.CNhs11015.353-12F5106.71
heart, embryo E13.CNhs11013.376-3I9100.47
heart, embryo E14.CNhs10597.403-26D491.62
heart, embryo E15.CNhs11017.431-16C882.25
heart, embryo E16.CNhs11021.457-17C683.00
heart, embryo E17.CNhs11025.479-18E575.57
heart, embryo E18.CNhs11030.1283-20G367.07
heart, neonate N00.CNhs11213.639-21E361.54
heart, neonate N03.CNhs11221.1349-25I270.43
heart, neonate N10.CNhs11118.749-24G146.95
heart, neonate N16.CNhs11209.782-15G134.05
heart, neonate N20.CNhs11127.821-26I632.75
heart, neonate N25.CNhs11196.1351-25D338.86
heart, neonate N30.CNhs11202.1390-42D225.63
hippocampus, adult.CNhs10478.13-16E850.89
hippocampus, neonate N00.CNhs11228.627-43G180.78
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A378.28
intestine, embryo E12.CNhs11019.1251-16I5136.50
intestine, embryo E13.CNhs11010.381-16D5117.05
intestine, embryo E15.CNhs10602.976-16D8125.26
intestine, embryo E16.CNhs10585.463-22H4100.04
intestine, embryo E17.CNhs10582.482-18D372.72
intestine, embryo E18.CNhs10526.1289-20F767.34
intestine, neonate N00.CNhs11126.644-26D149.35
intestine, neonate N01.CNhs11192.1322-23E960.44
intestine, neonate N06.CNhs11102.688-20B850.02
intestine, neonate N07.CNhs11095.720-20F248.94
intestine, neonate N10.CNhs11098.755-23A560.44
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E351.87
intestine, neonate N30.CNhs11131.1384-42G145.80
kidney, embryo E14.CNhs10606.411-4I950.26
kidney, embryo E15.CNhs10997.434-16F8124.07
kidney, embryo E16.CNhs10584.464-22A587.91
kidney, embryo E17.CNhs11028.483-18I290.42
kidney, embryo E18.CNhs11001.1288-20C787.28
kidney, neonate N00.CNhs11214.646-21G783.53
kidney, neonate N10.CNhs11206.758-6D550.97
kidney, neonate N20.CNhs11113.832-19I133.06
kidney, neonate N25.CNhs11122.1353-25F332.18
kidney, neonate N30.CNhs11203.1385-42H126.90
liver, adult pregnant day01.CNhs10466.508-5B255.14
liver, embryo E12.CNhs10601.355-15F8175.35
liver, embryo E13.CNhs10524.378-3H6175.92
liver, embryo E14.CNhs10594.409-16E1153.13
liver, embryo E15.CNhs10520.433-16D7124.76
liver, embryo E16.CNhs10523.462-17F5110.46
liver, embryo E17.CNhs10510.481-18A399.05
liver, embryo E18.CNhs10579.499-43G475.09
liver, neonate N00.CNhs11117.641-24F4115.93
liver, neonate N03.CNhs11123.1345-25G281.54
liver, neonate N06.CNhs11101.684-20A8162.46
liver, neonate N07.CNhs11103.716-20H259.54
liver, neonate N10.CNhs11115.751-24B962.10
liver, neonate N20.CNhs11220.823-25A362.39
liver, neonate N25.CNhs11198.1368-26H165.66
liver, neonate N30.CNhs11106.1382-42D129.91
lung, adult.CNhs10474.28-22B133.26
lung, embryo E12.CNhs10522.354-16G2134.16
lung, embryo E14.CNhs10604.404-26F8143.41
lung, embryo E15.CNhs11020.432-17C5119.67
lung, embryo E16.CNhs10998.458-17B6108.19
lung, embryo E17.CNhs10605.480-44A671.53
lung, embryo E18.CNhs10583.1287-20I643.80
lung, neonate N00.CNhs11224.640-42C639.61
lung, neonate N06.CNhs11212.683-20E561.16
lung, neonate N07.CNhs11111.715-19A351.82
lung, neonate N10.CNhs11219.750-23E646.40
lung, neonate N20.CNhs11109.822-18A430.81
lung, neonate N25.CNhs11119.1359-25C737.99
lung, neonate N30.CNhs11133.1394-42H223.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.72
mammary gland, adult lactating day02.CNhs10480.595-22B667.86
mammary gland, adult pregnant day19.CNhs10476.588-5H270.64
medulla oblongata, adult.CNhs10477.17-12C234.20
medulla oblongata, neonate N30.CNhs11200.1396-42A335.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7180.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C225.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1100.96
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2112.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E368.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D794.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D885.55
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D975.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4102.01
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D586.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D672.73
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I775.37
ovary, embryo E18.CNhs11040.505-44H757.69
ovary, neonate N00.CNhs11217.1299-22I481.28
oviduct, adult pregnant day01.CNhs10500.988-6G665.49
pancreas, adult.CNhs10486.34-16E453.10
pancreas, embryo E14.CNhs11012.405-44F4120.90
pancreas, embryo E15.CNhs11042.1556-45F2113.98
pancreas, embryo E16.CNhs11003.460-26E5111.84
pancreas, embryo E17.CNhs10599.1558-45G357.29
pancreas, embryo E18.CNhs10580.1535-43I794.08
pancreas, neonate N00.CNhs11105.645-26G978.82
pancreas, neonate N01.CNhs11138.1531-43D7104.70
pancreas, neonate N02.CNhs11139.1539-43D898.39
pancreas, neonate N16.CNhs11136.787-43B6113.14
pancreas, neonate N25.CNhs11094.1555-45E271.68
pancreas, neonate N30.CNhs11182.1548-44H549.51
pituitary gland, adult.CNhs10493.21-1G866.39
pituitary gland, embryo E12.CNhs11018.346-16E6104.44
pituitary gland, embryo E13.CNhs11009.370-44C731.05
pituitary gland, embryo E14.CNhs11037.398-44A571.59
pituitary gland, embryo E15.CNhs10592.427-16B974.13
pituitary gland, embryo E16.CNhs11036.449-43F664.21
pituitary gland, embryo E17.CNhs11039.1265-44F563.52
pituitary gland, neonate N00.CNhs11190.1308-22E926.18
placenta, adult pregnant day10.CNhs10472.539-13I779.08
placenta, adult pregnant day17.CNhs10464.577-18G349.99
prostate, adult.CNhs10470.859-1F855.35
skin, adult.CNhs10492.30-1C383.93
skin, neonate N00.CNhs11124.650-25G485.74
skin, neonate N03.CNhs11215.662-22H3102.29
skin, neonate N06.CNhs11097.693-20I585.11
skin, neonate N10.CNhs11108.762-6C4108.33
small intestine, neonate N16.CNhs11114.790-21I153.05
spinal cord, adult.CNhs10505.24-13C936.53
spleen, adult.CNhs10465.25-2G291.25
spleen, embryo E16.CNhs11035.461-43C187.51
spleen, embryo E18.CNhs11011.1271-21F2124.27
spleen, neonate N10.CNhs11116.752-24D1119.61
spleen, neonate N20.CNhs11112.824-19H1110.59
spleen, neonate N25.CNhs11099.1354-25G3105.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6238.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9251.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3216.28
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E3137.29
stomach, embryo E15.CNhs10603.1252-16G8115.89
stomach, embryo E16.CNhs11022.459-17D4104.77
stomach, embryo E17.CNhs11006.1035-18D589.91
stomach, embryo E18.CNhs10999.1286-20C681.23
stomach, neonate N03.CNhs11193.1340-24B872.15
stomach, neonate N07.CNhs11210.718-18A969.84
stomach, neonate N25.CNhs11104.1355-25E447.64
stomach, neonate N30.CNhs11134.1386-42I157.42
submandibular gland, adult.CNhs10469.59-29C131.69
testis, adult.CNhs10504.57-7G5164.60
testis, embryo E13.CNhs11031.389-23F5125.89
testis, embryo E15.CNhs11034.443-27C5100.10
testis, embryo E16.CNhs11033.470-26G591.98
testis, embryo E17.CNhs11029.486-18I590.15
testis, embryo E18.CNhs11027.503-18G5106.61
testis, neonate N00.CNhs11189.1300-22B7101.75
testis, neonate N07.CNhs11222.726-26I4107.03
testis, neonate N10.CNhs11204.763-44D9100.66
testis, neonate N20.CNhs11110.839-18H3114.75
testis, neonate N30.CNhs11130.1391-42E2134.80
thymus, adult.CNhs10471.38-12B583.11
thymus, embryo E14.CNhs11041.402-44I4101.57
thymus, embryo E15.CNhs11005.430-45I2129.42
thymus, embryo E16.CNhs11002.456-26C5161.88
thymus, embryo E17.CNhs10581.478-18C1140.89
thymus, embryo E18.CNhs10595.1273-19G4120.60
thymus, neonate N02.CNhs11181.1541-43F8123.92
thymus, neonate N03.CNhs11137.2104-43C7118.59
thymus, neonate N06.CNhs11197.681-26C4143.98
thymus, neonate N07.CNhs11211.713-19D3124.90
thymus, neonate N10.CNhs11194.748-24E4107.58
thymus, neonate N20.CNhs11186.820-7A293.75
thymus, neonate N25.CNhs11125.1362-25G7104.20
thymus, neonate N30.CNhs11132.1393-42G268.26
tongue, adult.CNhs10499.32-1B448.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3190.46
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7284.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5215.56
urinary bladder, adult.CNhs10481.879-12E447.33
uterus, adult pregnant day19.CNhs10497.590-15F545.98
uterus, adult.CNhs10509.92-27E597.99
vagina, adult.CNhs10502.89-27D598.61
vesicular gland, adult.CNhs10491.51-27F844.64
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A159.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A259.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.14
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.46
whole body, embryo E11.CNhs11014.324-5I8148.52
whole body, embryo E12.CNhs10587.857-27C9100.55
whole body, embryo E13.CNhs10512.372-23H294.24
whole body, embryo E14.5.CNhs10578.420-27D299.43
whole body, embryo E14.CNhs10519.395-14B1108.16
whole body, embryo E16.CNhs10514.453-14F292.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G581.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G589.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G578.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G574.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G584.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G577.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G580.63
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G577.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G577.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G583.35
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G577.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G577.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G578.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G587.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G584.35
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G579.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G582.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G590.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G589.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G587.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G578.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G584.71
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G580.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G572.95
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G576.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G577.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G586.35
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G576.07
whole body, embryo E17.5.CNhs10513.490-9F969.83
whole body, embryo E17.CNhs10517.475-3I545.97
whole body, embryo E18.CNhs10516.493-3B368.07
whole body, neonate N00.CNhs10525.657-19C264.03
whole body, neonate N01.CNhs10576.659-23C652.22
whole body, neonate N06.CNhs10515.692-21D150.96
whole body, neonate N10.CNhs10518.761-6B470.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:59741793..59741867,%2B&oldid=895749"