CL:0000764: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000764
|name=erythroid lineage cell
|namespace=cell
|def="A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm]
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|id=CL:0000764 | |id=CL:0000764 | ||
|name=erythroid lineage cell | |name=erythroid lineage cell | ||
|namespace= | |namespace=efo | ||
|def="A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm] | |def="A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm] | ||
|xref=FMA:62845;;FMA:83516 | |xref=FMA:62845;;FMA:83516 | ||
|is_a=CL:0000763 | |is_a=CL:0000763 | ||
|synonym="erythropoietic cell" EXACT [] | |synonym="erythropoietic cell" EXACT [] | ||
|comment= | |comment=Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes. | ||
|alt_id=CL:0002156 | |alt_id=CL:0002156 | ||
|disjoint_from= | |disjoint_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:38, 15 June 2012
Name: | erythroid lineage cell | |
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Namespace: | efo | |
Definition: | "A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm] | |
Xrefs: |
| |
Synonyms: | "erythropoietic cell" EXACT [] | |
Comments: | Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes. | |
Alt_id: | CL:0002156 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000763(myeloid cell) |
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Children
is a: | CL:0000038 (erythroid progenitor cell),CL:0000547 (proerythroblast),CL:0000558 (reticulocyte),CL:0000765 (erythroblast) |
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disjoint from: | CL:0000556 (megakaryocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
- 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
- 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
- 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
- 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
- 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
- 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
- 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
- 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
- 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)
... further results Mouse (Mus musculus)
- 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
- 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
- 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
- 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
- 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
- 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
- 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
- 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
- 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
- 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000764 (erythroid lineage cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data