Personal tools

FFCP PHASE1:Mm9::chr5:122299030..122299046,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0002321!1.52e-13!70;CL:0000220!1.52e-13!70;CL:0000221!7.83e-09!44;CL:0000133!7.83e-09!44;CL:0002319!1.20e-08!43;CL:0000066!1.70e-08!25;CL:0000540!3.11e-08!33;CL:0000047!3.11e-08!33;CL:0000031!3.11e-08!33;CL:0000404!3.11e-08!33;CL:0000055!1.30e-07!50;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39;CL:0002563!5.03e-07!9;CL:0002251!5.03e-07!9
|ontology_enrichment_celltype=CL:0002321!1.52e-13!70;CL:0000220!1.52e-13!70;CL:0000221!7.83e-09!44;CL:0000133!7.83e-09!44;CL:0002319!1.20e-08!43;CL:0000066!1.70e-08!25;CL:0000540!3.11e-08!33;CL:0000047!3.11e-08!33;CL:0000031!3.11e-08!33;CL:0000404!3.11e-08!33;CL:0000055!1.30e-07!50;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39;CL:0002563!5.03e-07!9;CL:0002251!5.03e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000160!8.13e-11!43;UBERON:0000344!1.21e-10!15;UBERON:0001242!1.88e-09!13;UBERON:0000060!1.88e-09!13;UBERON:0001262!1.88e-09!13;UBERON:0004786!1.88e-09!13;UBERON:0005409!1.92e-08!59;UBERON:0003350!5.03e-07!9;UBERON:0004808!5.03e-07!9;UBERON:0001277!5.03e-07!9;UBERON:0000485!6.12e-07!11
|phase1_expression=6.08565618998217,246.725613201028,211.119647076745,321.51945661916,361.646717021263,33.575854382378,28.7343547932497,1.16210991097419,10.6999428835267,11.2350972634557,0.68487187290202,1.03703806693937,1.36960583944965,0.961624426608971,0.999329285446988,0.607425802169478,0,0.315462165358238,0.548457734422955,0.42438965179803,5.10259740906419,2.48227378002213,1.56719873483361,34.5583633233758,40.8348520299563,128.05372799765,75.3833493278381,60.9783588501066,49.0260422197445,50.1539958222262,24.3903561720835,8.25539875497521,9.84103660135312,15.8481681015439,34.662194370153,23.9377889316229,35.933806702177,0.418531630736908,2.3440060335714,0.523523743973798,0,1.36609096991689,0.485510353031154,3.14742044938943,3.95370031756107,4.03802854755699,17.9950009200049,7.41285531693518,4.83309602015838,7.38833616482277,6.15940255151595,7.18762821824858,3.02008690903925,6.5282592781021,4.7053131879945,3.60163210450326,6.30373567865265,6.18806510732931,12.5436205732951,10.0508286061686,14.5781222806421,9.4876468979357,8.89294796111139,5.84934816232909,3.9554654502679,5.6838409195688,8.68840320503374,15.7529505181837,10.3689612308478,12.8255641415106,12.8298226424343,5.71301968807607,8.1721360152097,12.4940615199253,13.801747826626,25.7381260250806,7.70811166995721,4.08599481872601,5.52983519722476,11.4741070325269,12.5338071735301,9.37644067002168,5.02529398202486,3.37657566019008,6.1119299110724,9.72274332063103,5.69486723196412,4.10078780815661,1.66597625333005,2.49386148352392,15.9425468785923,4.30211938490693,11.5595126730318,6.47643829965381,5.84798775702902,6.72040330646003,5.75822122540183,1.87473354835864,3.37721805983729,1.41335829804136,6.76048414928066,10.2661181931454,15.2883143823987,0,5.19578498426914,3.80039798212648,6.0662933401774,12.1034912502204,0.517875767294343,1.7813056687779,4.3371331691534,5.78484408793068,3.45923245884088,2.26083960828934,2.3517741427141,2.38766523526383,22.7419370315624,1.73519228303894,1.76922110389975,5.17653919831709,5.52103796150984,6.30337829075789,7.45567044872489,4.9772735491963,5.23616767033638,54.6678098146386,2.99537811264801,2.39961092397363,3.55796635804581,2.39665023047716,1.37250180845588,5.6544458450789,2.60736480288415,2.30143911597297,3.1168206683934,2.43361894601636,2.95334155165917,5.22509276562391,2.27450482590307,1.47309299120532,6.24578126220978,4.82794419310293,4.50155324513373,2.86339153887859,3.81004395247436,3.33095672740609,6.74652416830048,2.32833033665114,10.5628316537093,7.75334928688059,6.33424046990216,4.60311038097907,3.89266148915837,4.179025998266,4.52720700097476,4.97585667046233,0.702213187313235,2.57347907114715,2.27330799516474,2.69263504296152,2.81431271977315,3.96136535214233,3.07768156260773,2.95146347621106,4.31947916084659,3.72054311600653,6.17028823219124,4.43708300995244,4.27855609775049,3.61168420974009,5.35054143002648,5.99419948443863,2.19550115291051,3.89198614405078,1.68231958851302,3.49875682089567,108.046942035702,69.0215978991851,5.54549451391608,7.89604684325491,8.89185483122444,12.5043785266472,18.0126215514345,19.5932394895936,52.6727258314408,28.9870160314259,26.6415321328286,19.0998213159505,23.2007263671753,36.8515957548231,39.553263127069,53.7681437786791,4.55202962287396,6.16941968092536,7.88954149711563,6.31319116320474,5.62462212786115,5.6810014111158,6.00747102680444,4.28069429140846,6.75094529717912,7.28043267138623,3.85388415213294,2.33583148002532,1.57247196090562,1.34917267430912,2.02860121388503,2.17059443777175,1.78238096246994,4.31544206176216,4.86405680325106,1.64736847912849,1.43768206527355,2.60498663367952,2.49630138491648,3.28352541331245,3.58794827043824,8.20153986317724,3.14080423283228,6.253216588426,3.42226450528254,5.60158783058121,4.22442446919304,6.53274404023081,6.42717830392237,7.21994497073856,3.94087860265477,5.09368786192182,5.10255259703959,6.06294264448231,4.83517949224508,3.90552458170081,3.01582567878545,2.71952841909355,1.47529281905711,4.13905119457099,2.56880943980467,2.69586879162067,1.3114795630134,1.51482556322624,12.6203287766503,8.98009111882268,9.90947629570875,8.36390792833932,7.79795359288379,8.49229592366497,10.9298889452221,17.2430956167674,7.11518000303742,2.89189184779626,3.40656204499845,6.41036173202119,4.23506094319298,5.27904393512113,2.65490276679926,4.61283208694465,3.02323556964751,3.01768127609437,3.54362271456927,2.15204603560749,9.8202751403924,5.45300594216258,2.49548164869305,3.79244109522979,2.10837217149998,3.09406629744561,4.76615448055303,6.12207719706455,6.59729287292048,6.64444808597936,3.54680467284547,7.13475270408282,4.93647061806363,5.48036908406279,10.7948985709307,13.3454204644207,3.96951116498931,3.13283880588812,3.71368181400583,3.25689794612042,4.05865969610664,2.9545361954111,40.2243554549194,1.8542530201051,1.19609616558497,2.47664241555867,2.96311243791539,0.376736914009382,0.410082683163076,0.457556346413045,5.94924504978494,8.11718423477216,6.77179871641677,25.7761066864081,7.43389584915668,5.69294507955176,6.80433647177348,2.71814784818809,9.17122767733946,5.52943820177765,6.36431609085087,17.799404054914,19.3126310204771,5.59205381778233,1.12738587736838,7.32631075615496,5.12921320417003,3.88902376688095,6.32883135040882,3.8859908862879,3.52071715937262,3.51551839078665,4.40409246587986,1.44950472495604,1.44015003128933,2.52808896502543,4.45995473638361,3.28675062927447,1.81889152168913,1.43221356533985,2.38417625737518,1.80293174279953,2.21534290761866,2.1202954489111,1.143102099825,2.52065462842101,2.43644701849381,2.40529604100824,3.03879945672079,3.62768613784338,11.3212836220773,16.9559188991909,12.927115460034,3.09103350451505,3.56596703357246,3.47988086107804,5.14484109789758,5.01572104035363,2.82375921308533,3.22227665555024,2.29158205375759,6.01486138202907,2.05524755931193,3.7769694869485,4.72515750162264,1.80128481289688,1.81256963593682,2.5888015587591,7.9916257639816,7.18244772121856,5.80494259564056,4.132814190161,2.93458427679175,4.77993121970037,3.11145418922261,4.32673620201678,2.56735367673452,3.53776096469316,4.05566879824384,2.07488975524684,6.08669798554236,5.25006249719928,4.88201486122713,6.19181798667996,4.98302601562879,5.01563973205633,3.29668720642645,6.32955356577908,4.4573002810104,4.79184676630211,4.29185141905178,6.24989591519013,4.98779716201252,4.65380343404221,2.92684756596436,2.63069711437843,3.66671107383827,4.48913817326191,4.27086065247027,3.74317033027141,4.91077251803627,4.64810523557898,5.40138510747196,2.99772693525535,7.25187986180766,5.58664740525576,4.01705497344571,3.97064554415128,3.01428186306548
|phase1_expression=6.08565618998217,246.725613201028,211.119647076745,321.51945661916,361.646717021263,33.575854382378,28.7343547932497,1.16210991097419,10.6999428835267,11.2350972634557,0.68487187290202,1.03703806693937,1.36960583944965,0.961624426608971,0.999329285446988,0.607425802169478,0,0.315462165358238,0.548457734422955,0.42438965179803,5.10259740906419,2.48227378002213,1.56719873483361,34.5583633233758,40.8348520299563,128.05372799765,75.3833493278381,60.9783588501066,49.0260422197445,50.1539958222262,24.3903561720835,8.25539875497521,9.84103660135312,15.8481681015439,34.662194370153,23.9377889316229,35.933806702177,0.418531630736908,2.3440060335714,0.523523743973798,0,1.36609096991689,0.485510353031154,3.14742044938943,3.95370031756107,4.03802854755699,17.9950009200049,7.41285531693518,4.83309602015838,7.38833616482277,6.15940255151595,7.18762821824858,3.02008690903925,6.5282592781021,4.7053131879945,3.60163210450326,6.30373567865265,6.18806510732931,12.5436205732951,10.0508286061686,14.5781222806421,9.4876468979357,8.89294796111139,5.84934816232909,3.9554654502679,5.6838409195688,8.68840320503374,15.7529505181837,10.3689612308478,12.8255641415106,12.8298226424343,5.71301968807607,8.1721360152097,12.4940615199253,13.801747826626,25.7381260250806,7.70811166995721,4.08599481872601,5.52983519722476,11.4741070325269,12.5338071735301,9.37644067002168,5.02529398202486,3.37657566019008,6.1119299110724,9.72274332063103,5.69486723196412,4.10078780815661,1.66597625333005,2.49386148352392,15.9425468785923,4.30211938490693,11.5595126730318,6.47643829965381,5.84798775702902,6.72040330646003,5.75822122540183,1.87473354835864,3.37721805983729,1.41335829804136,6.76048414928066,10.2661181931454,15.2883143823987,0,5.19578498426914,3.80039798212648,6.0662933401774,12.1034912502204,0.517875767294343,1.7813056687779,4.3371331691534,5.78484408793068,3.45923245884088,2.26083960828934,2.3517741427141,2.38766523526383,22.7419370315624,1.73519228303894,1.76922110389975,5.17653919831709,5.52103796150984,6.30337829075789,7.45567044872489,4.9772735491963,5.23616767033638,54.6678098146386,2.99537811264801,2.39961092397363,3.55796635804581,2.39665023047716,1.37250180845588,5.6544458450789,2.60736480288415,2.30143911597297,3.1168206683934,2.43361894601636,2.95334155165917,5.22509276562391,2.27450482590307,1.47309299120532,6.24578126220978,4.82794419310293,4.50155324513373,2.86339153887859,3.81004395247436,3.33095672740609,6.74652416830048,2.32833033665114,10.5628316537093,7.75334928688059,6.33424046990216,4.60311038097907,3.89266148915837,4.179025998266,4.52720700097476,4.97585667046233,0.702213187313235,2.57347907114715,2.27330799516474,2.69263504296152,2.81431271977315,3.96136535214233,3.07768156260773,2.95146347621106,4.31947916084659,3.72054311600653,6.17028823219124,4.43708300995244,4.27855609775049,3.61168420974009,5.35054143002648,5.99419948443863,2.19550115291051,3.89198614405078,1.68231958851302,3.49875682089567,108.046942035702,69.0215978991851,5.54549451391608,7.89604684325491,8.89185483122444,12.5043785266472,18.0126215514345,19.5932394895936,52.6727258314408,28.9870160314259,26.6415321328286,19.0998213159505,23.2007263671753,36.8515957548231,39.553263127069,53.7681437786791,4.55202962287396,6.16941968092536,7.88954149711563,6.31319116320474,5.62462212786115,5.6810014111158,6.00747102680444,4.28069429140846,6.75094529717912,7.28043267138623,3.85388415213294,2.33583148002532,1.57247196090562,1.34917267430912,2.02860121388503,2.17059443777175,1.78238096246994,4.31544206176216,4.86405680325106,1.64736847912849,1.43768206527355,2.60498663367952,2.49630138491648,3.28352541331245,3.58794827043824,8.20153986317724,3.14080423283228,6.253216588426,3.42226450528254,5.60158783058121,4.22442446919304,6.53274404023081,6.42717830392237,7.21994497073856,3.94087860265477,5.09368786192182,5.10255259703959,6.06294264448231,4.83517949224508,3.90552458170081,3.01582567878545,2.71952841909355,1.47529281905711,4.13905119457099,2.56880943980467,2.69586879162067,1.3114795630134,1.51482556322624,12.6203287766503,8.98009111882268,9.90947629570875,8.36390792833932,7.79795359288379,8.49229592366497,10.9298889452221,17.2430956167674,7.11518000303742,2.89189184779626,3.40656204499845,6.41036173202119,4.23506094319298,5.27904393512113,2.65490276679926,4.61283208694465,3.02323556964751,3.01768127609437,3.54362271456927,2.15204603560749,9.8202751403924,5.45300594216258,2.49548164869305,3.79244109522979,2.10837217149998,3.09406629744561,4.76615448055303,6.12207719706455,6.59729287292048,6.64444808597936,3.54680467284547,7.13475270408282,4.93647061806363,5.48036908406279,10.7948985709307,13.3454204644207,3.96951116498931,3.13283880588812,3.71368181400583,3.25689794612042,4.05865969610664,2.9545361954111,40.2243554549194,1.8542530201051,1.19609616558497,2.47664241555867,2.96311243791539,0.376736914009382,0.410082683163076,0.457556346413045,5.94924504978494,8.11718423477216,6.77179871641677,25.7761066864081,7.43389584915668,5.69294507955176,6.80433647177348,2.71814784818809,9.17122767733946,5.52943820177765,6.36431609085087,17.799404054914,19.3126310204771,5.59205381778233,1.12738587736838,7.32631075615496,5.12921320417003,3.88902376688095,6.32883135040882,3.8859908862879,3.52071715937262,3.51551839078665,4.40409246587986,1.44950472495604,1.44015003128933,2.52808896502543,4.45995473638361,3.28675062927447,1.81889152168913,1.43221356533985,2.38417625737518,1.80293174279953,2.21534290761866,2.1202954489111,1.143102099825,2.52065462842101,2.43644701849381,2.40529604100824,3.03879945672079,3.62768613784338,11.3212836220773,16.9559188991909,12.927115460034,3.09103350451505,3.56596703357246,3.47988086107804,5.14484109789758,5.01572104035363,2.82375921308533,3.22227665555024,2.29158205375759,6.01486138202907,2.05524755931193,3.7769694869485,4.72515750162264,1.80128481289688,1.81256963593682,2.5888015587591,7.9916257639816,7.18244772121856,5.80494259564056,4.132814190161,2.93458427679175,4.77993121970037,3.11145418922261,4.32673620201678,2.56735367673452,3.53776096469316,4.05566879824384,2.07488975524684,6.08669798554236,5.25006249719928,4.88201486122713,6.19181798667996,4.98302601562879,5.01563973205633,3.29668720642645,6.32955356577908,4.4573002810104,4.79184676630211,4.29185141905178,6.24989591519013,4.98779716201252,4.65380343404221,2.92684756596436,2.63069711437843,3.66671107383827,4.48913817326191,4.27086065247027,3.74317033027141,4.91077251803627,4.64810523557898,5.40138510747196,2.99772693525535,7.25187986180766,5.58664740525576,4.01705497344571,3.97064554415128,3.01428186306548
|short_description=p1@Fam109a
|short_description=p1@Fam109a
}}
}}

Revision as of 14:52, 19 April 2012

Short description:p1@Fam109a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam109a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000056654, NM_175474, uc008zkj.1, uc008zkk.1_5end
EntrezGene:Fam109a
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Fam109a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5246.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6211.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I3321.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I4361.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I733.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.73
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D240.83
GP2+ M cell, pool1.CNhs13228.11845-124H9128.05
GP2+ M cell, pool2.CNhs13231.11846-124I175.38
GP2+ M cell, pool3.CNhs13240.11847-124I260.98
Ileum epithelium, pool1.CNhs13199.10252-104B949.03
Ileum epithelium, pool2.CNhs13232.10253-104C150.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F735.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.10
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A822.74
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H754.67
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E210.56
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I3108.05
intestine, adult.CNhs10496.178-9A369.02
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F719.59
intestine, neonate N00.CNhs11126.644-26D152.67
intestine, neonate N01.CNhs11192.1322-23E928.99
intestine, neonate N06.CNhs11102.688-20B826.64
intestine, neonate N07.CNhs11095.720-20F219.10
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D136.85
intestine, neonate N25.CNhs11121.1352-25E339.55
intestine, neonate N30.CNhs11131.1384-42G153.77
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D56.01
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G313.35
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I140.22
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.77
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I119.31
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I87.99
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.