Personal tools

FFCP PHASE1:Mm9::chr8:41597123..41597141,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Vps37a_5end
|description=CAGE_peak_2_at_Vps37a_5end
|id=chr8:41597123..41597141,+
|id=chr8:41597123..41597141,+
|ontology_enrichment_celltype=CL:0000055!4.51e-10!50;CL:0000393!4.24e-09!39;CL:0000211!4.24e-09!39;CL:0000117!1.84e-08!23;CL:0000337!1.84e-08!23;CL:0000221!2.07e-08!44;CL:0000133!2.07e-08!44;CL:0002319!2.13e-08!43;CL:0000540!6.46e-08!33;CL:0000047!6.46e-08!33;CL:0000031!6.46e-08!33;CL:0000404!6.46e-08!33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.28119077683835,1.04692622291808,0.909998478779072,3.93203474698879,4.50806156951712,1.17515490338323,1.16806320297763,2.7115897922731,0.281577444303333,1.63845168425395,1.71217968225505,1.67521533890206,1.54080656938085,2.27293046289393,0.999329285446988,0.404950534779652,1.39912375625629,0.946386496074713,1.7824876368746,0.84877930359606,7.22867966284093,0.595745707205312,0.783599367416806,0.639969691173627,1.37645568640302,1.14846392823004,1.29228598847722,1.939241094173,0.190023419456374,0.252030129759931,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.332469290716985,0.408338712524738,2.51118978442145,0,1.57057123192139,4.70585190424811,2.04913645487534,1.45653105909346,1.76255545165808,2.33166941804883,2.20256102594018,1.56478268869608,1.96222640742402,1.31811709640683,1.36100929351998,1.67983705950435,1.43752564364972,0.838913030288682,1.45072428402269,0.336093799142464,1.54355661621568,2.29226751951005,4.12537673821954,2.42779753031517,1.5869729378161,1.90149421051854,2.03306719241479,0,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,2.30530983192933,3.52544681848824,2.70011876663381,3.57552434297349,3.42781181284564,4.19650227808066,1.95985278743926,3.73797336971122,0.919218786610021,4.40463523997555,4.97980618532232,5.9906547969935,1.58263545276233,2.74462930807229,0.52091337055676,5.30447698102624,5.06486349028512,5.04234217663473,5.00868595305235,5.69486723196412,6.15118171223492,4.69502398665741,3.47629176491213,1.15945795480671,3.44169550792555,0,0.539703191637817,0.649776417447669,0.896053774194671,3.37066608316204,1.02258193546835,1.03914401841148,1.7666978725517,1.69012103732017,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,1.01104889002957,1.94112595522402,2.33044095282455,3.41416919849097,1.56136794089522,0,0.691846491768175,0.753613202763113,1.76383060703557,2.13633205260448,0.988779870937496,1.01219549843938,0,2.10296904931632,1.76673214768315,0.969750506270444,0,2.04946557908083,2.93225389538837,1.02182822083437,0.239630249011841,0,0.508280908292259,4.6435098215495,1.83000241127451,2.51308704225729,2.43354048269187,3.83573185995496,3.53239675751252,3.56930778749067,1.73126918545538,1.24406970610093,2.52722758433675,2.31486041475121,1.17108398666433,1.37941262660084,1.26043490863744,2.10986744970001,1.42876648217788,0.896796041993948,1.87403449119458,1.81092359517311,0.646703978798527,0.189106080167819,1.05570674498369,1.31517439456545,0.834141747676794,1.39300866608867,0.61734640922383,2.38841120182192,0,0.772043721344145,0.284163499395593,1.24275463521301,2.11073453982987,2.16074473753218,2.3674473558521,1.18058539048442,1.3884040159864,1.39520366850245,1.87791380979733,1.63471479314037,2.63295759861569,0.656669856316381,1.86458261955468,2.92399974850665,1.3173006917463,1.47627060636409,3.15434922846191,2.36680608472354,1.65209391491899,1.85115396664481,0.853153002140936,0.696710015581316,0.902072229254653,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.58489226135736,0,1.29682829924817,1.39398891278057,0.569003702859245,1.25673363870702,1.1270773567308,1.22190796707189,1.35766741017338,1.19230893813542,1.39120381673366,1.18088118383682,0.941992367048249,1.35736880313981,3.26097889795864,1.33476084572875,0.982794975566015,0.449724224769707,0.405720242777006,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,1.37280706594041,1.43768206527355,0.372140947668503,2.49630138491648,1.01031551178845,1.07638448113147,1.92977408545347,1.10851914099963,1.70542270593436,1.30371981153621,1.18821560042632,0.469380496577004,1.34005005953453,2.14239276797412,0.975668239288994,1.26108115284953,0.221464689648775,2.87018583583477,0.983179888294428,1.89953480052485,1.44649058581512,0,0,2.45882136509518,0.551873492609465,2.40825884981688,3.5163505977661,1.47541450839008,2.52470927204373,2.2085575359138,1.17131623288992,2.36965737506079,0.477937595905104,2.67358408898873,1.98153571552183,0.809621403349789,2.63030272120181,2.76701444562566,4.81981974632711,2.12910127812403,1.06839362200353,2.11753047159649,1.31976098378028,2.65490276679926,0.728341908464944,0.906970670894253,0.188605079755898,0,2.15204603560749,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,1.70219802876894,0.900305470156551,1.03486947026204,1.07168517515796,2.30542303734956,1.07021290561242,0.822745103010605,0.608929898229199,2.58138878870081,2.96564899209348,1.54369878638473,1.15420377059036,0.807322133479528,2.17126529741361,1.07435109602823,1.31312719796049,1.7488850197791,3.8939313422207,1.02522528478712,0.412773735926445,1.11116716421827,0.376736914009382,0.546776910884101,0.915112692826091,0.509935289981566,0.979660166265606,0.690999869022119,0,0.790839983952838,0.609958401380546,0.86404272657441,1.04544148007234,1.52853794622324,1.21377911746339,1.32245529160537,1.57053565190418,0.90730481304255,0.621339313086926,27.0572610568411,0.897099276263873,1.48912641411388,2.13896307178452,1.03327858782185,1.85851738039856,1.76035857968631,2.99470085141085,2.9360616439199,9.90494895386625,11.5212002503146,1.89606672376907,0.405450430580328,0.821687657318618,1.16928740680016,1.25318686967237,0.993406773906324,2.28371354087941,1.47689527174577,1.00966449948148,0.838274873204998,1.10908803650525,0.974578807397524,1.53938946624527,1.28564592399726,2.49403421976732,1.99787358036658,2.24284641523689,1.51096154727671,0.965947970160952,1.68914227906064,0.915758121336325,1.50057865355346,1.00314420807073,1.6942555278512,1.84130094602871,3.43737308063638,2.92150409984269,0.685082519770642,3.0215755895588,1.35004500046361,3.60256962579376,2.71885445390523,2.5888015587591,0.830298780673413,1.59609949360412,1.36586884603307,1.45864030240976,1.46729213839588,1.83843508450014,1.55572709461131,1.64828045791115,2.24643446714271,2.02157769411038,2.5347929989024,2.07488975524684,1.68554713445788,1.98477972455095,2.81433797882505,0.476293691283074,1.97003354106254,2.31491064556446,0.824171801606613,1.91358596174717,1.71434626192708,1.77475806159337,2.38436189947321,2.18019624948493,1.69396884747595,2.11536519729191,1.64635175585495,2.63069711437843,2.71608227691724,1.12228454331548,2.01679530811096,1.77308068276014,2.86461730218783,2.94379998253335,1.54325288784913,0.999242311751784,0.467863216890817,1.07435527024149,1.3390183244819,2.20591419119516,3.01428186306548
|phase1_expression=1.28119077683835,1.04692622291808,0.909998478779072,3.93203474698879,4.50806156951712,1.17515490338323,1.16806320297763,2.7115897922731,0.281577444303333,1.63845168425395,1.71217968225505,1.67521533890206,1.54080656938085,2.27293046289393,0.999329285446988,0.404950534779652,1.39912375625629,0.946386496074713,1.7824876368746,0.84877930359606,7.22867966284093,0.595745707205312,0.783599367416806,0.639969691173627,1.37645568640302,1.14846392823004,1.29228598847722,1.939241094173,0.190023419456374,0.252030129759931,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.332469290716985,0.408338712524738,2.51118978442145,0,1.57057123192139,4.70585190424811,2.04913645487534,1.45653105909346,1.76255545165808,2.33166941804883,2.20256102594018,1.56478268869608,1.96222640742402,1.31811709640683,1.36100929351998,1.67983705950435,1.43752564364972,0.838913030288682,1.45072428402269,0.336093799142464,1.54355661621568,2.29226751951005,4.12537673821954,2.42779753031517,1.5869729378161,1.90149421051854,2.03306719241479,0,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,2.30530983192933,3.52544681848824,2.70011876663381,3.57552434297349,3.42781181284564,4.19650227808066,1.95985278743926,3.73797336971122,0.919218786610021,4.40463523997555,4.97980618532232,5.9906547969935,1.58263545276233,2.74462930807229,0.52091337055676,5.30447698102624,5.06486349028512,5.04234217663473,5.00868595305235,5.69486723196412,6.15118171223492,4.69502398665741,3.47629176491213,1.15945795480671,3.44169550792555,0,0.539703191637817,0.649776417447669,0.896053774194671,3.37066608316204,1.02258193546835,1.03914401841148,1.7666978725517,1.69012103732017,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,1.01104889002957,1.94112595522402,2.33044095282455,3.41416919849097,1.56136794089522,0,0.691846491768175,0.753613202763113,1.76383060703557,2.13633205260448,0.988779870937496,1.01219549843938,0,2.10296904931632,1.76673214768315,0.969750506270444,0,2.04946557908083,2.93225389538837,1.02182822083437,0.239630249011841,0,0.508280908292259,4.6435098215495,1.83000241127451,2.51308704225729,2.43354048269187,3.83573185995496,3.53239675751252,3.56930778749067,1.73126918545538,1.24406970610093,2.52722758433675,2.31486041475121,1.17108398666433,1.37941262660084,1.26043490863744,2.10986744970001,1.42876648217788,0.896796041993948,1.87403449119458,1.81092359517311,0.646703978798527,0.189106080167819,1.05570674498369,1.31517439456545,0.834141747676794,1.39300866608867,0.61734640922383,2.38841120182192,0,0.772043721344145,0.284163499395593,1.24275463521301,2.11073453982987,2.16074473753218,2.3674473558521,1.18058539048442,1.3884040159864,1.39520366850245,1.87791380979733,1.63471479314037,2.63295759861569,0.656669856316381,1.86458261955468,2.92399974850665,1.3173006917463,1.47627060636409,3.15434922846191,2.36680608472354,1.65209391491899,1.85115396664481,0.853153002140936,0.696710015581316,0.902072229254653,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.58489226135736,0,1.29682829924817,1.39398891278057,0.569003702859245,1.25673363870702,1.1270773567308,1.22190796707189,1.35766741017338,1.19230893813542,1.39120381673366,1.18088118383682,0.941992367048249,1.35736880313981,3.26097889795864,1.33476084572875,0.982794975566015,0.449724224769707,0.405720242777006,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,1.37280706594041,1.43768206527355,0.372140947668503,2.49630138491648,1.01031551178845,1.07638448113147,1.92977408545347,1.10851914099963,1.70542270593436,1.30371981153621,1.18821560042632,0.469380496577004,1.34005005953453,2.14239276797412,0.975668239288994,1.26108115284953,0.221464689648775,2.87018583583477,0.983179888294428,1.89953480052485,1.44649058581512,0,0,2.45882136509518,0.551873492609465,2.40825884981688,3.5163505977661,1.47541450839008,2.52470927204373,2.2085575359138,1.17131623288992,2.36965737506079,0.477937595905104,2.67358408898873,1.98153571552183,0.809621403349789,2.63030272120181,2.76701444562566,4.81981974632711,2.12910127812403,1.06839362200353,2.11753047159649,1.31976098378028,2.65490276679926,0.728341908464944,0.906970670894253,0.188605079755898,0,2.15204603560749,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,1.70219802876894,0.900305470156551,1.03486947026204,1.07168517515796,2.30542303734956,1.07021290561242,0.822745103010605,0.608929898229199,2.58138878870081,2.96564899209348,1.54369878638473,1.15420377059036,0.807322133479528,2.17126529741361,1.07435109602823,1.31312719796049,1.7488850197791,3.8939313422207,1.02522528478712,0.412773735926445,1.11116716421827,0.376736914009382,0.546776910884101,0.915112692826091,0.509935289981566,0.979660166265606,0.690999869022119,0,0.790839983952838,0.609958401380546,0.86404272657441,1.04544148007234,1.52853794622324,1.21377911746339,1.32245529160537,1.57053565190418,0.90730481304255,0.621339313086926,27.0572610568411,0.897099276263873,1.48912641411388,2.13896307178452,1.03327858782185,1.85851738039856,1.76035857968631,2.99470085141085,2.9360616439199,9.90494895386625,11.5212002503146,1.89606672376907,0.405450430580328,0.821687657318618,1.16928740680016,1.25318686967237,0.993406773906324,2.28371354087941,1.47689527174577,1.00966449948148,0.838274873204998,1.10908803650525,0.974578807397524,1.53938946624527,1.28564592399726,2.49403421976732,1.99787358036658,2.24284641523689,1.51096154727671,0.965947970160952,1.68914227906064,0.915758121336325,1.50057865355346,1.00314420807073,1.6942555278512,1.84130094602871,3.43737308063638,2.92150409984269,0.685082519770642,3.0215755895588,1.35004500046361,3.60256962579376,2.71885445390523,2.5888015587591,0.830298780673413,1.59609949360412,1.36586884603307,1.45864030240976,1.46729213839588,1.83843508450014,1.55572709461131,1.64828045791115,2.24643446714271,2.02157769411038,2.5347929989024,2.07488975524684,1.68554713445788,1.98477972455095,2.81433797882505,0.476293691283074,1.97003354106254,2.31491064556446,0.824171801606613,1.91358596174717,1.71434626192708,1.77475806159337,2.38436189947321,2.18019624948493,1.69396884747595,2.11536519729191,1.64635175585495,2.63069711437843,2.71608227691724,1.12228454331548,2.01679530811096,1.77308068276014,2.86461730218783,2.94379998253335,1.54325288784913,0.999242311751784,0.467863216890817,1.07435527024149,1.3390183244819,2.20591419119516,3.01428186306548
|short_description=p2@Vps37a
|short_description=p2@Vps37a
}}
}}

Revision as of 05:51, 19 April 2012

Short description:p2@Vps37a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vps37a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098817, ENSMUST00000166612, ENSMUST00000172147, NM_033560, uc009lmv.1, uc009lmw.1, uc009lmx.1, uc009lmy.1_5end
EntrezGene:Vps37a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vps37a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G527.06
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E211.52
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:41597123..41597141,%2B&oldid=1032210"