Personal tools

FFCP PHASE1:Mm9::chrX:20265090..20265165,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Cdk16_5end
|description=CAGE_peak_3_at_Cdk16_5end
|id=chrX:20265090..20265165,+
|id=chrX:20265090..20265165,+
|ontology_enrichment_celltype=CL:0000393!2.04e-07!39;CL:0000211!2.04e-07!39;CL:0000117!2.56e-07!23;CL:0000337!2.56e-07!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=3.68342348341026,2.79180326111489,3.18499467572675,2.72217790176147,4.50806156951712,3.69334398206158,2.33612640595526,2.06597317506522,1.267098499365,0.70219357896598,1.02730780935303,1.11681022593471,1.88320802924326,2.97229368224591,0.999329285446988,0.809901069559304,0.699561878128147,0.630924330716475,1.37114433605739,1.69755860719212,17.3488311908182,2.38298282882125,2.35079810225042,2.07990149631429,4.12936705920906,2.29692785646008,2.15380998079537,2.58565479223067,3.80046838912748,2.01624103807945,1.77384408524244,2.54012269383853,2.46025915033828,0,3.75507105676657,3.49092755252834,2.6542016314108,3.76678467663217,0,1.0470474879476,4.1176204162171,0,0,7.05022180663233,6.18399280439039,4.77221555620372,4.69434806608824,2.61630187656536,2.19686182734472,4.6663175777828,0.839918529752175,1.43752564364972,1.67782606057736,2.90144856804538,2.01656279485478,5.14518872071894,3.43840127926508,7.21940929188419,6.67644320836673,9.52183762689659,8.23980824558033,3.38844532069132,4.4464739805557,3.1496490104849,5.93319817540185,0.7104801149461,2.69640099466564,2.68952813725088,5.70292867696627,7.69533848490637,6.09942387919008,6.28432165688368,7.95126747425809,5.51208596467293,6.80502844229478,8.27296907949019,5.50579404996943,7.78892762319645,5.9906547969935,6.72620067423989,7.13603620098795,4.68822033501084,6.14202597803038,1.12552522006336,5.19514042441154,2.65165726926301,4.27115042397309,5.40558392893372,2.87759534666099,4.38315048619356,2.6087803983151,0.860423876981386,2.03991400112325,2.15881276655127,0,0.448026887097336,4.21333260395256,5.62420064507591,3.11743205523443,4.59341446863442,3.66192891419369,2.56652954828636,5.09610479413291,0,8.65964164044856,8.10751569520315,7.07734223020697,3.53970027129086,2.84831672011889,4.60170631100957,3.64319186208885,3.65358573974569,4.38169444786511,4.82312449768392,5.52666923537813,5.02666365318702,1.97755974187499,5.92857363371638,0.884610551949874,1.94120219936891,0.883366073841574,2.42437626567611,0,7.90508151931177,11.7290155815535,4.59822699375465,1.67741174308288,0.599902730993408,2.1601938602421,8.98743836428936,4.11750542536764,9.42407640846483,7.82209440865244,9.46147192122223,6.2336413367868,6.65189178577806,2.74966282395854,3.6078021476927,12.3834151632501,1.05220927943237,4.29397461776922,2.98872735763515,4.86167750474443,1.9591626318643,3.46986145671772,4.22775276940004,2.99845518591132,2.32833033665114,5.38919982332106,3.78212160335639,3.69497360744293,3.72632745126877,5.00485048606076,4.179025998266,3.2925141825271,6.17006227137329,2.1066395619397,1.02939162845886,0.852490498186778,5.59239585845855,4.45599513964083,2.52086886045421,4.49814997611899,4.52557733019029,4.47374627373397,3.95307706075693,4.29237442239391,3.97002164048376,5.26591519723137,5.91002870684743,3.64809642956351,5.4093995347373,5.70830299756732,4.02619256281115,5.04695876553905,7.9236551532049,3.63460661282178,3.17340679996253,6.61193576659225,6.50262681209228,4.25262622362908,5.24377164020691,4.44756087689741,3.61428689613862,2.84717436926707,2.79988223030818,2.76468729680296,2.38747766449381,2.33956904542944,3.59527763461689,2.80979464837102,4.38110801159608,5.12103332573321,4.68418901699888,7.88954149711563,4.07302655690629,4.84881217919064,3.99774173374816,3.47800954183415,2.21415221969403,2.66897837330337,2.34454611451421,0.889357881261447,1.66845105716094,2.55526693647164,3.14806957338795,1.01430060694251,0.482354319504834,2.29163266603278,2.01387296215567,1.45921704097532,1.64736847912849,2.87536413054709,0.372140947668503,1.87222603868736,1.01031551178845,1.61457672169721,0.482443521363367,3.8798169934987,3.60033682363921,7.33342393989116,4.2436271443797,3.28566347603903,4.18765643604539,3.33261097240419,5.26860849216057,3.31033802623001,4.65075848262427,3.34855014180723,3.27726629431476,3.45369963731791,1.88043776155965,0,1.08781136763742,3.93411418415229,3.31124095565679,5.13761887960934,6.79827782234778,4.09837363441689,1.26235463602186,4.10160685241134,1.56175497718655,4.30846795465598,4.06246956519338,4.45597348164788,2.83076530788832,5.66734982344852,3.50707029493574,5.53402889125133,9.63963949265421,4.5420827266646,4.62970569534864,3.4206261464251,5.27904393512113,1.32745138339963,2.42780636154981,3.93020624054176,3.20628635585027,5.02013217897314,6.45613810682248,4.65170927702798,3.99887102425256,3.56497378384721,3.47640433729398,4.21674434299995,7.21948802737308,6.12791290356818,4.68158844481407,5.30370603509293,4.28674070063185,5.49754724291048,5.52943334566419,3.78462747384878,8.22055362609418,3.28540391289194,8.04961869282517,6.17479514553893,1.81374878235628,4.35953952078945,3.25689794612042,3.10368094408155,4.43180429311665,3.78925087618806,7.78786268444141,1.19609616558497,2.88941615148511,1.85194527369712,1.69531611304222,1.23024804948923,2.28778173206523,1.5298058699447,1.11961161858926,2.21119958087078,0.954670618015114,7.11755985557555,4.67634774391752,3.99619761040665,3.76358932826044,4.80397640241591,2.42755823492677,2.81021749466142,2.6175594198403,1.42576470620972,2.4853572523477,93.0093348828914,8.07389348637486,5.62558867554132,8.5558522871381,7.23295011475294,7.43406952159424,5.04636126176742,3.3853140059427,4.71867049915699,3.14059357073808,29.955120650818,1.58005560314089,4.45995473638361,2.46506297195585,1.81889152168913,2.68540043501222,1.98681354781265,1.80293174279953,2.80610101631697,2.42319479875554,2.13379058634,2.21817607301049,2.0466154955348,2.50150788264857,2.80504565235765,2.0405734525369,0.443971906748129,1.34570784914214,2.3503846290971,3.28422309854724,2.81523713176773,2.74727436400898,1.07184189539533,5.01572104035363,5.0827665835536,11.0478056761722,9.16632821503035,8.76451229952807,6.16574267793578,9.06472676867641,3.37511250115903,8.55610286126019,6.34399372577886,7.7664046762773,4.67043064128795,4.38927360741134,3.58540572083682,4.86213434136588,4.40187641518763,4.77993121970037,5.778414922842,3.91466608753899,5.13470735346904,4.80124702351215,4.81610669791456,3.58390048633545,4.40115085108447,5.89031402124797,5.39893408182765,2.38146845641537,3.70829843023538,4.62982129112892,3.70877310722976,5.15196220470391,2.74295401908332,5.50174999093946,4.29185141905178,6.24989591519013,4.70546902076653,5.07687647350059,4.20734337607377,5.78753365163254,5.29636043998861,6.73370725989286,3.55905054372522,3.25064791839359,3.6830793885272,4.02835787083512,4.05103883060397,6.24526444844865,5.38042699424439,6.01638951335235,4.01705497344571,4.41182838239031,1.85494268496337
|phase1_expression=3.68342348341026,2.79180326111489,3.18499467572675,2.72217790176147,4.50806156951712,3.69334398206158,2.33612640595526,2.06597317506522,1.267098499365,0.70219357896598,1.02730780935303,1.11681022593471,1.88320802924326,2.97229368224591,0.999329285446988,0.809901069559304,0.699561878128147,0.630924330716475,1.37114433605739,1.69755860719212,17.3488311908182,2.38298282882125,2.35079810225042,2.07990149631429,4.12936705920906,2.29692785646008,2.15380998079537,2.58565479223067,3.80046838912748,2.01624103807945,1.77384408524244,2.54012269383853,2.46025915033828,0,3.75507105676657,3.49092755252834,2.6542016314108,3.76678467663217,0,1.0470474879476,4.1176204162171,0,0,7.05022180663233,6.18399280439039,4.77221555620372,4.69434806608824,2.61630187656536,2.19686182734472,4.6663175777828,0.839918529752175,1.43752564364972,1.67782606057736,2.90144856804538,2.01656279485478,5.14518872071894,3.43840127926508,7.21940929188419,6.67644320836673,9.52183762689659,8.23980824558033,3.38844532069132,4.4464739805557,3.1496490104849,5.93319817540185,0.7104801149461,2.69640099466564,2.68952813725088,5.70292867696627,7.69533848490637,6.09942387919008,6.28432165688368,7.95126747425809,5.51208596467293,6.80502844229478,8.27296907949019,5.50579404996943,7.78892762319645,5.9906547969935,6.72620067423989,7.13603620098795,4.68822033501084,6.14202597803038,1.12552522006336,5.19514042441154,2.65165726926301,4.27115042397309,5.40558392893372,2.87759534666099,4.38315048619356,2.6087803983151,0.860423876981386,2.03991400112325,2.15881276655127,0,0.448026887097336,4.21333260395256,5.62420064507591,3.11743205523443,4.59341446863442,3.66192891419369,2.56652954828636,5.09610479413291,0,8.65964164044856,8.10751569520315,7.07734223020697,3.53970027129086,2.84831672011889,4.60170631100957,3.64319186208885,3.65358573974569,4.38169444786511,4.82312449768392,5.52666923537813,5.02666365318702,1.97755974187499,5.92857363371638,0.884610551949874,1.94120219936891,0.883366073841574,2.42437626567611,0,7.90508151931177,11.7290155815535,4.59822699375465,1.67741174308288,0.599902730993408,2.1601938602421,8.98743836428936,4.11750542536764,9.42407640846483,7.82209440865244,9.46147192122223,6.2336413367868,6.65189178577806,2.74966282395854,3.6078021476927,12.3834151632501,1.05220927943237,4.29397461776922,2.98872735763515,4.86167750474443,1.9591626318643,3.46986145671772,4.22775276940004,2.99845518591132,2.32833033665114,5.38919982332106,3.78212160335639,3.69497360744293,3.72632745126877,5.00485048606076,4.179025998266,3.2925141825271,6.17006227137329,2.1066395619397,1.02939162845886,0.852490498186778,5.59239585845855,4.45599513964083,2.52086886045421,4.49814997611899,4.52557733019029,4.47374627373397,3.95307706075693,4.29237442239391,3.97002164048376,5.26591519723137,5.91002870684743,3.64809642956351,5.4093995347373,5.70830299756732,4.02619256281115,5.04695876553905,7.9236551532049,3.63460661282178,3.17340679996253,6.61193576659225,6.50262681209228,4.25262622362908,5.24377164020691,4.44756087689741,3.61428689613862,2.84717436926707,2.79988223030818,2.76468729680296,2.38747766449381,2.33956904542944,3.59527763461689,2.80979464837102,4.38110801159608,5.12103332573321,4.68418901699888,7.88954149711563,4.07302655690629,4.84881217919064,3.99774173374816,3.47800954183415,2.21415221969403,2.66897837330337,2.34454611451421,0.889357881261447,1.66845105716094,2.55526693647164,3.14806957338795,1.01430060694251,0.482354319504834,2.29163266603278,2.01387296215567,1.45921704097532,1.64736847912849,2.87536413054709,0.372140947668503,1.87222603868736,1.01031551178845,1.61457672169721,0.482443521363367,3.8798169934987,3.60033682363921,7.33342393989116,4.2436271443797,3.28566347603903,4.18765643604539,3.33261097240419,5.26860849216057,3.31033802623001,4.65075848262427,3.34855014180723,3.27726629431476,3.45369963731791,1.88043776155965,0,1.08781136763742,3.93411418415229,3.31124095565679,5.13761887960934,6.79827782234778,4.09837363441689,1.26235463602186,4.10160685241134,1.56175497718655,4.30846795465598,4.06246956519338,4.45597348164788,2.83076530788832,5.66734982344852,3.50707029493574,5.53402889125133,9.63963949265421,4.5420827266646,4.62970569534864,3.4206261464251,5.27904393512113,1.32745138339963,2.42780636154981,3.93020624054176,3.20628635585027,5.02013217897314,6.45613810682248,4.65170927702798,3.99887102425256,3.56497378384721,3.47640433729398,4.21674434299995,7.21948802737308,6.12791290356818,4.68158844481407,5.30370603509293,4.28674070063185,5.49754724291048,5.52943334566419,3.78462747384878,8.22055362609418,3.28540391289194,8.04961869282517,6.17479514553893,1.81374878235628,4.35953952078945,3.25689794612042,3.10368094408155,4.43180429311665,3.78925087618806,7.78786268444141,1.19609616558497,2.88941615148511,1.85194527369712,1.69531611304222,1.23024804948923,2.28778173206523,1.5298058699447,1.11961161858926,2.21119958087078,0.954670618015114,7.11755985557555,4.67634774391752,3.99619761040665,3.76358932826044,4.80397640241591,2.42755823492677,2.81021749466142,2.6175594198403,1.42576470620972,2.4853572523477,93.0093348828914,8.07389348637486,5.62558867554132,8.5558522871381,7.23295011475294,7.43406952159424,5.04636126176742,3.3853140059427,4.71867049915699,3.14059357073808,29.955120650818,1.58005560314089,4.45995473638361,2.46506297195585,1.81889152168913,2.68540043501222,1.98681354781265,1.80293174279953,2.80610101631697,2.42319479875554,2.13379058634,2.21817607301049,2.0466154955348,2.50150788264857,2.80504565235765,2.0405734525369,0.443971906748129,1.34570784914214,2.3503846290971,3.28422309854724,2.81523713176773,2.74727436400898,1.07184189539533,5.01572104035363,5.0827665835536,11.0478056761722,9.16632821503035,8.76451229952807,6.16574267793578,9.06472676867641,3.37511250115903,8.55610286126019,6.34399372577886,7.7664046762773,4.67043064128795,4.38927360741134,3.58540572083682,4.86213434136588,4.40187641518763,4.77993121970037,5.778414922842,3.91466608753899,5.13470735346904,4.80124702351215,4.81610669791456,3.58390048633545,4.40115085108447,5.89031402124797,5.39893408182765,2.38146845641537,3.70829843023538,4.62982129112892,3.70877310722976,5.15196220470391,2.74295401908332,5.50174999093946,4.29185141905178,6.24989591519013,4.70546902076653,5.07687647350059,4.20734337607377,5.78753365163254,5.29636043998861,6.73370725989286,3.55905054372522,3.25064791839359,3.6830793885272,4.02835787083512,4.05103883060397,6.24526444844865,5.38042699424439,6.01638951335235,4.01705497344571,4.41182838239031,1.85494268496337
|short_description=p3@Cdk16
|short_description=p3@Cdk16
}}
}}

Revision as of 08:42, 19 April 2012

Short description:p3@Cdk16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdk16_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000132365, uc009stn.1_5end
EntrezGene:Cdk16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cdk16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B212.38
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.47
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G17.92
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D53.48
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F87.33
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A36.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C75.30
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G593.01
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G58.56
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E229.96
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:20265090..20265165,%2B&oldid=1052063"