Personal tools

FFCP PHASE1:Mm9::chr9:86360780..86360826,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002020!6.61e-10!34;UBERON:0001049!2.07e-09!52;UBERON:0005068!2.07e-09!52;UBERON:0006241!2.07e-09!52;UBERON:0007135!2.07e-09!52;UBERON:0000955!2.39e-09!50;UBERON:0006238!2.39e-09!50;UBERON:0000153!6.60e-09!94;UBERON:0002616!7.41e-09!49;UBERON:0007811!7.53e-09!86;UBERON:0000033!2.65e-08!63;UBERON:0002791!2.75e-08!29;UBERON:0003528!2.75e-08!29;UBERON:0001893!2.75e-08!29;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003056!2.90e-07!49;UBERON:0002346!6.18e-07!71;UBERON:0003075!6.18e-07!71;UBERON:0007284!6.18e-07!71;UBERON:0003080!6.82e-07!40
|phase1_expression=9.92922852049723,10.8182376368202,6.82498859084304,22.0798874253986,12.5223932486587,9.40123922706583,10.0453435456076,18.0772652818207,18.3025338797167,19.8954847373694,8.04724450659873,9.33334260245436,43.6561861324575,38.6398178691969,13.9906099962578,10.7311891716608,11.1929900500503,26.3410908074128,27.0115434203305,18.6731446791133,22.2813420195803,7.94327609607082,8.35839325244593,9.11956809922418,7.57050627521661,7.46501553349526,5.1691439539089,10.5580904016086,11.7814520062952,11.5933859689568,8.86922042621219,6.35030673459631,5.53558308826113,15.8481681015439,12.4206196493048,5.98444723290572,10.0042984568561,29.7157457823205,21.0960543021426,16.2292360631877,13.5293242247133,31.4200923080885,25.24653835762,14.604030885167,12.8748702648783,12.4811791469943,8.60630478782843,2.18025156380447,1.31811709640683,3.4997381833371,2.37976916763116,2.87505128729943,15.6037823633695,36.9934692425786,39.3229744996683,7.97504251711436,11.4613375975503,13.9231464914909,19.0177473208022,16.9277113367051,20.9164363157039,4.06613438482959,4.4464739805557,3.1496490104849,2.96659908770092,3.5524005747305,1.79760066311043,3.45796474789399,17.6272340924412,12.9605700798423,14.5124223332454,17.424710048632,17.4486147351775,23.1507610516263,11.7889929352431,28.4957823849107,40.7428759697738,39.0723254540674,29.3388478519425,19.9148294472593,18.754966938494,25.0038417867245,21.4970909231063,27.0126052815206,31.7820355375765,41.8372591372608,36.020035242173,34.4838974776806,9.61722655331437,8.76630097238712,28.4067198927644,17.2084775396277,4.75979933595425,6.47643829965381,8.4470934268197,11.6486990645307,10.5333315098814,7.83979483859066,4.67614808285164,4.94675404314476,5.49289337129054,12.8326477414318,33.1246811618639,14.2213340630666,5.62876706629157,4.56047757855178,2.02209778005913,13.9304333257253,36.7691794778984,15.289540323677,8.15381035800839,9.43842982767638,8.99400439298628,9.49552635481522,15.6392980490487,9.17366116706631,23.4835219347655,16.9181247596297,19.4614321428972,15.8531512948461,11.2629174414801,12.6067565815158,13.0474232852686,56.2139130262171,45.4499353785197,17.3710797541842,6.94927722134338,2.99951365496704,6.09937089950711,35.9497534571574,29.7375391832107,32.418822845119,37.0245802009549,34.7773021969249,33.4538751740892,32.2860113504838,18.1274067653563,13.9335807083304,14.6579199891531,17.4666740385773,6.76626303406059,9.19608417733892,14.4049703844279,17.6324636867787,24.1529571987214,28.3131321829518,22.3947121697752,40.6164292060255,4.095791865724,13.615637772083,17.243210168067,11.836569551089,16.4047877043103,20.89512999133,19.1377386859387,10.9468846750171,2.1066395619397,5.1469581422943,6.25159698670304,8.69928244649108,9.61556845922494,7.92273070428465,8.75955521665278,11.0187969778546,11.1072321278912,9.06882384526591,10.4626626545851,15.6465558772007,11.3546296440302,17.237583728305,18.1594133382717,15.9357986293612,12.2948064562988,14.6284996448805,33.4361018216962,31.2830021633025,21.8076396769307,16.3959351331397,7.25180051819795,12.5407802804637,11.8558064416326,14.722897297504,18.0126215514345,16.7398550979052,14.7104009078799,15.152303834609,15.3314477368164,19.4977342600328,18.3266241891973,21.5716658077013,14.2651112917298,15.732160587095,3.60369011810855,10.8536086979242,12.3978509240388,11.8117770150282,13.7706265889014,15.1493370963088,19.6033265085198,18.1560482014911,15.6998727841375,16.6586171294431,8.89357881261447,11.6791574001266,9.23827277032054,8.09503604585473,8.11440485554012,12.5412123071257,9.16653066413111,10.3570609482292,15.0785760900783,11.5315793538994,21.5652309791032,16.3742016974142,15.601883655728,8.08252409430758,9.68746033018326,15.9206362049911,26.0501998134913,7.76914788258988,10.9186534216157,11.8821560042632,14.0814148973101,14.9080569123216,16.901098502907,18.5376965464909,25.8521636334153,18.8244986201459,25.0343986792255,25.2349504662237,21.7583077151028,20.3955172599931,3.01582567878545,9.79030230873677,4.91764273019036,9.10591262805617,35.9633321572654,33.0536956190013,4.09837363441689,12.876017287423,11.042787679569,13.6653560503823,13.3562506594335,7.64700153448166,10.0259403337077,9.6246020468203,10.9298889452221,11.3979784585412,13.8350722281283,37.2732727049296,16.7489300545757,11.2181330310371,21.0124177566113,20.1263550026493,7.96470830039777,8.74010290157933,7.86041248108353,9.05304382828311,4.13422650033082,15.6791925451403,16.0225541764297,17.8131527443978,15.329387270543,13.5895805912401,11.5960469432499,6.18813259489121,27.9160476718106,9.18311579559682,4.39819524861365,9.21649250635847,15.6059405605201,9.98865378571595,16.1258040190079,10.3518082698964,12.4376005273766,20.3358788029267,13.2317038832977,18.6321465823872,27.287488111608,20.6270203254293,21.009532544552,22.9797259643086,15.7399651780119,30.5951748317341,11.4483490134561,9.90656966223468,14.8155621895769,14.8811081033706,15.1730592770338,12.3540213531522,9.34881364966204,10.216456019627,11.4705978257672,7.63736494412091,6.80122386199441,14.84232110026,12.7446302169725,13.1725626489115,14.4119292072477,16.9929076444874,16.0347704107152,12.0407733312654,21.256855619854,14.2908042009993,40.0221986465775,9.71857549285862,9.92750942742586,15.7505462558679,12.9159823477731,12.6717094118084,14.787012069365,13.2808472540829,13.1074180532139,45.1762305944631,35.4276907697175,25.9129118915106,8.71718425747706,8.83314231617514,11.5629532450238,16.4704560014083,17.0865965111888,16.2263856851958,16.8366060979018,17.1642964911851,17.146531497375,16.2330158070313,22.4153125701431,16.1635893955754,23.2585035341322,12.4701710988366,7.32553646134413,5.11368982674011,9.56942313275247,20.0917177793478,14.0761856588386,18.3151624267265,15.8632600518509,15.0471631210609,36.7088697701093,44.191222704689,37.2382083735608,31.7928387335822,44.5303637850917,49.8559972277202,37.1262375127493,39.6282658837314,38.5171047636574,33.1366599521165,5.18936737920883,9.57659696162474,15.8782253351345,17.0174701947806,11.947950269795,12.869045591501,16.4462578573195,18.9552252659783,21.5015870426516,21.7319602116866,20.5318232911094,24.3327980388038,17.2300373744584,19.59169663589,18.4367855347519,24.7672719467198,20.04798838846,18.5192851645157,23.0768104449852,20.9022466590844,18.8578088811978,23.2493306068732,21.6976932852062,19.912459078629,18.2572198005741,19.5459744229773,17.5610853957862,18.1518100892112,17.9261430276538,21.8845485946518,20.2865880992338,21.8679950873751,19.6430900721451,20.7615367189194,20.2551941530198,17.4867404556562,18.4805970671873,19.1235238102985,18.5549682106778,16.7649478530832,15.5351449865682
|phase1_expression=9.92922852049723,10.8182376368202,6.82498859084304,22.0798874253986,12.5223932486587,9.40123922706583,10.0453435456076,18.0772652818207,18.3025338797167,19.8954847373694,8.04724450659873,9.33334260245436,43.6561861324575,38.6398178691969,13.9906099962578,10.7311891716608,11.1929900500503,26.3410908074128,27.0115434203305,18.6731446791133,22.2813420195803,7.94327609607082,8.35839325244593,9.11956809922418,7.57050627521661,7.46501553349526,5.1691439539089,10.5580904016086,11.7814520062952,11.5933859689568,8.86922042621219,6.35030673459631,5.53558308826113,15.8481681015439,12.4206196493048,5.98444723290572,10.0042984568561,29.7157457823205,21.0960543021426,16.2292360631877,13.5293242247133,31.4200923080885,25.24653835762,14.604030885167,12.8748702648783,12.4811791469943,8.60630478782843,2.18025156380447,1.31811709640683,3.4997381833371,2.37976916763116,2.87505128729943,15.6037823633695,36.9934692425786,39.3229744996683,7.97504251711436,11.4613375975503,13.9231464914909,19.0177473208022,16.9277113367051,20.9164363157039,4.06613438482959,4.4464739805557,3.1496490104849,2.96659908770092,3.5524005747305,1.79760066311043,3.45796474789399,17.6272340924412,12.9605700798423,14.5124223332454,17.424710048632,17.4486147351775,23.1507610516263,11.7889929352431,28.4957823849107,40.7428759697738,39.0723254540674,29.3388478519425,19.9148294472593,18.754966938494,25.0038417867245,21.4970909231063,27.0126052815206,31.7820355375765,41.8372591372608,36.020035242173,34.4838974776806,9.61722655331437,8.76630097238712,28.4067198927644,17.2084775396277,4.75979933595425,6.47643829965381,8.4470934268197,11.6486990645307,10.5333315098814,7.83979483859066,4.67614808285164,4.94675404314476,5.49289337129054,12.8326477414318,33.1246811618639,14.2213340630666,5.62876706629157,4.56047757855178,2.02209778005913,13.9304333257253,36.7691794778984,15.289540323677,8.15381035800839,9.43842982767638,8.99400439298628,9.49552635481522,15.6392980490487,9.17366116706631,23.4835219347655,16.9181247596297,19.4614321428972,15.8531512948461,11.2629174414801,12.6067565815158,13.0474232852686,56.2139130262171,45.4499353785197,17.3710797541842,6.94927722134338,2.99951365496704,6.09937089950711,35.9497534571574,29.7375391832107,32.418822845119,37.0245802009549,34.7773021969249,33.4538751740892,32.2860113504838,18.1274067653563,13.9335807083304,14.6579199891531,17.4666740385773,6.76626303406059,9.19608417733892,14.4049703844279,17.6324636867787,24.1529571987214,28.3131321829518,22.3947121697752,40.6164292060255,4.095791865724,13.615637772083,17.243210168067,11.836569551089,16.4047877043103,20.89512999133,19.1377386859387,10.9468846750171,2.1066395619397,5.1469581422943,6.25159698670304,8.69928244649108,9.61556845922494,7.92273070428465,8.75955521665278,11.0187969778546,11.1072321278912,9.06882384526591,10.4626626545851,15.6465558772007,11.3546296440302,17.237583728305,18.1594133382717,15.9357986293612,12.2948064562988,14.6284996448805,33.4361018216962,31.2830021633025,21.8076396769307,16.3959351331397,7.25180051819795,12.5407802804637,11.8558064416326,14.722897297504,18.0126215514345,16.7398550979052,14.7104009078799,15.152303834609,15.3314477368164,19.4977342600328,18.3266241891973,21.5716658077013,14.2651112917298,15.732160587095,3.60369011810855,10.8536086979242,12.3978509240388,11.8117770150282,13.7706265889014,15.1493370963088,19.6033265085198,18.1560482014911,15.6998727841375,16.6586171294431,8.89357881261447,11.6791574001266,9.23827277032054,8.09503604585473,8.11440485554012,12.5412123071257,9.16653066413111,10.3570609482292,15.0785760900783,11.5315793538994,21.5652309791032,16.3742016974142,15.601883655728,8.08252409430758,9.68746033018326,15.9206362049911,26.0501998134913,7.76914788258988,10.9186534216157,11.8821560042632,14.0814148973101,14.9080569123216,16.901098502907,18.5376965464909,25.8521636334153,18.8244986201459,25.0343986792255,25.2349504662237,21.7583077151028,20.3955172599931,3.01582567878545,9.79030230873677,4.91764273019036,9.10591262805617,35.9633321572654,33.0536956190013,4.09837363441689,12.876017287423,11.042787679569,13.6653560503823,13.3562506594335,7.64700153448166,10.0259403337077,9.6246020468203,10.9298889452221,11.3979784585412,13.8350722281283,37.2732727049296,16.7489300545757,11.2181330310371,21.0124177566113,20.1263550026493,7.96470830039777,8.74010290157933,7.86041248108353,9.05304382828311,4.13422650033082,15.6791925451403,16.0225541764297,17.8131527443978,15.329387270543,13.5895805912401,11.5960469432499,6.18813259489121,27.9160476718106,9.18311579559682,4.39819524861365,9.21649250635847,15.6059405605201,9.98865378571595,16.1258040190079,10.3518082698964,12.4376005273766,20.3358788029267,13.2317038832977,18.6321465823872,27.287488111608,20.6270203254293,21.009532544552,22.9797259643086,15.7399651780119,30.5951748317341,11.4483490134561,9.90656966223468,14.8155621895769,14.8811081033706,15.1730592770338,12.3540213531522,9.34881364966204,10.216456019627,11.4705978257672,7.63736494412091,6.80122386199441,14.84232110026,12.7446302169725,13.1725626489115,14.4119292072477,16.9929076444874,16.0347704107152,12.0407733312654,21.256855619854,14.2908042009993,40.0221986465775,9.71857549285862,9.92750942742586,15.7505462558679,12.9159823477731,12.6717094118084,14.787012069365,13.2808472540829,13.1074180532139,45.1762305944631,35.4276907697175,25.9129118915106,8.71718425747706,8.83314231617514,11.5629532450238,16.4704560014083,17.0865965111888,16.2263856851958,16.8366060979018,17.1642964911851,17.146531497375,16.2330158070313,22.4153125701431,16.1635893955754,23.2585035341322,12.4701710988366,7.32553646134413,5.11368982674011,9.56942313275247,20.0917177793478,14.0761856588386,18.3151624267265,15.8632600518509,15.0471631210609,36.7088697701093,44.191222704689,37.2382083735608,31.7928387335822,44.5303637850917,49.8559972277202,37.1262375127493,39.6282658837314,38.5171047636574,33.1366599521165,5.18936737920883,9.57659696162474,15.8782253351345,17.0174701947806,11.947950269795,12.869045591501,16.4462578573195,18.9552252659783,21.5015870426516,21.7319602116866,20.5318232911094,24.3327980388038,17.2300373744584,19.59169663589,18.4367855347519,24.7672719467198,20.04798838846,18.5192851645157,23.0768104449852,20.9022466590844,18.8578088811978,23.2493306068732,21.6976932852062,19.912459078629,18.2572198005741,19.5459744229773,17.5610853957862,18.1518100892112,17.9261430276538,21.8845485946518,20.2865880992338,21.8679950873751,19.6430900721451,20.7615367189194,20.2551941530198,17.4867404556562,18.4805970671873,19.1235238102985,18.5549682106778,16.7649478530832,15.5351449865682
|short_description=p1@Dopey1
|short_description=p1@Dopey1
}}
}}

Revision as of 04:49, 20 April 2012

Short description:p1@Dopey1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dopey1_5end
Coexpression cluster:NA
Association with transcript: 19bp_to_ENSMUST00000034987, NM_177208, uc009qxd.2, uc009qxe.2, uc009qxf.2, uc009qxg.2, uc009qxj.2, uc012gxo.1_5end
EntrezGene:Dopey1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dopey1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E443.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I210.56
Ileum epithelium, pool1.CNhs13199.10252-104B911.78
Ileum epithelium, pool2.CNhs13232.10253-104C111.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A139.32
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C319.02
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D641.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F636.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.48
Mouse Schwann, donor1.CNhs12507.11728-123D99.62
Mouse Schwann, donor2.CNhs12573.11746-123F98.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.93
accessory axillary lymph node, adult.CNhs10475.1063-29H936.77
adrenal gland, adult.CNhs10508.49-24D715.29
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F59.50
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A823.48
aorta, adult.CNhs10498.46-23H116.92
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F515.85
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B256.21
cerebellum, neonate N30.CNhs11135.1395-42I245.45
colon, adult.CNhs10468.36-18H717.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.10
corpora quadrigemina, adult.CNhs10501.16-22A435.95
corpus striatum, adult.CNhs10487.19-21D829.74
corpus striatum, neonate N00.CNhs11226.630-43F132.42
cortex, adult.CNhs10473.12-14D537.02
cortex, neonate N30.CNhs11107.1392-42F234.78
diencephalon, adult.CNhs10482.20-12F233.45
diencephalon, neonate N30.CNhs11201.1388-42B232.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G417.47
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C624.15
eyeball, neonate N01.CNhs11140.1532-43E728.31
eyeball, neonate N02.CNhs11205.1551-44G822.39
eyeball, neonate N16.CNhs11188.777-19A240.62
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E217.24
forelimb, embryo E14.CNhs10577.413-26A811.84
forelimb, embryo E15.CNhs11007.437-20E716.40
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I610.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E98.70
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C611.11
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E315.65
heart, neonate N03.CNhs11221.1349-25I211.35
heart, neonate N10.CNhs11118.749-24G117.24
heart, neonate N16.CNhs11209.782-15G118.16
heart, neonate N20.CNhs11127.821-26I615.94
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E833.44
hippocampus, neonate N00.CNhs11228.627-43G131.28
intestinal mucosa, adult.CNhs10506.860-29I321.81
intestine, adult.CNhs10496.178-9A316.40
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D811.86
intestine, embryo E16.CNhs10585.463-22H414.72
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F716.74
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E915.15
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A518.33
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G115.73
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F810.85
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.81
kidney, embryo E18.CNhs11001.1288-20C713.77
kidney, neonate N00.CNhs11214.646-21G715.15
kidney, neonate N10.CNhs11206.758-6D519.60
kidney, neonate N20.CNhs11113.832-19I118.16
kidney, neonate N25.CNhs11122.1353-25F315.70
kidney, neonate N30.CNhs11203.1385-42H116.66
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F811.68
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F415.08
liver, neonate N03.CNhs11123.1345-25G211.53
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B126.05
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C511.88
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I616.90
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E525.85
lung, neonate N07.CNhs11111.715-19A318.82
lung, neonate N10.CNhs11219.750-23E625.03
lung, neonate N20.CNhs11109.822-18A425.23
lung, neonate N25.CNhs11119.1359-25C721.76
lung, neonate N30.CNhs11133.1394-42H220.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C235.96
medulla oblongata, neonate N30.CNhs11200.1396-42A333.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I937.27
ovary, adult.CNhs10507.91-2I716.75
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I421.01
oviduct, adult pregnant day01.CNhs10500.988-6G620.13
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G916.02
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G827.92
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F516.13
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G320.34
prostate, adult.CNhs10470.859-1F813.23
skin, adult.CNhs10492.30-1C318.63
skin, neonate N00.CNhs11124.650-25G427.29
skin, neonate N03.CNhs11215.662-22H320.63
skin, neonate N06.CNhs11097.693-20I521.01
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C930.60
spleen, adult.CNhs10465.25-2G211.45
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F214.82
spleen, neonate N10.CNhs11116.752-24D114.88
spleen, neonate N20.CNhs11112.824-19H115.17
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.47
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D412.74
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B816.99
stomach, neonate N07.CNhs11210.718-18A916.03
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I121.26
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G540.02
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C59.93
testis, embryo E16.CNhs11033.470-26G515.75
testis, embryo E17.CNhs11029.486-18I512.92
testis, embryo E18.CNhs11027.503-18G512.67
testis, neonate N00.CNhs11189.1300-22B714.79
testis, neonate N07.CNhs11222.726-26I413.28
testis, neonate N10.CNhs11204.763-44D913.11
testis, neonate N20.CNhs11110.839-18H345.18
testis, neonate N30.CNhs11130.1391-42E235.43
thymus, adult.CNhs10471.38-12B525.91
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I28.83
thymus, embryo E16.CNhs11002.456-26C511.56
thymus, embryo E17.CNhs10581.478-18C116.47
thymus, embryo E18.CNhs10595.1273-19G417.09
thymus, neonate N02.CNhs11181.1541-43F816.23
thymus, neonate N03.CNhs11137.2104-43C716.84
thymus, neonate N06.CNhs11197.681-26C417.16
thymus, neonate N07.CNhs11211.713-19D317.15
thymus, neonate N10.CNhs11194.748-24E416.23
thymus, neonate N20.CNhs11186.820-7A222.42
thymus, neonate N25.CNhs11125.1362-25G716.16
thymus, neonate N30.CNhs11132.1393-42G223.26
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.57
urinary bladder, adult.CNhs10481.879-12E420.09
uterus, adult pregnant day19.CNhs10497.590-15F514.08
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D515.86
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A444.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I85.19
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.73
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.76
whole body, embryo E17.5.CNhs10513.490-9F920.26
whole body, embryo E17.CNhs10517.475-3I517.49
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C219.12
whole body, neonate N01.CNhs10576.659-23C618.55
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B415.54





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:86360780..86360826,%2B&oldid=1168815"