UBERON:0003408: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003408
|name=gland of gut
|namespace=
|def="A gland that is part of a digestive tract [Obol]." [OBOL:automatic]
|xref=EMAPA:18815
|is_a=UBERON:00025...") |
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|part_of=UBERON:0001555 | |part_of=UBERON:0001555 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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}} | }} | ||
Revision as of 17:18, 15 June 2012
| Name: | gland of gut | ||
|---|---|---|---|
| Definition: | "A gland that is part of a digestive tract [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"digestive tract gland" EXACT [OBOL:automatic] "gland of digestive tract" EXACT [OBOL:automatic] "gland of lower gastrointestinal tract" EXACT [OBOL:automatic] "gut gland" EXACT [OBOL:automatic] "lower gastrointestinal tract gland" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002530(gland),UBERON:0004119(endoderm-derived structure) |
|---|---|
| part_of: | UBERON:0001555(digestive tract) |
Children
| is a: | UBERON:0000333 (intestinal gland),UBERON:0003294 (gland of foregut),UBERON:0003295 (pharyngeal gland),UBERON:0010047 (oral gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003408 (gland of gut), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.66e-65 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_1e7f70c7fdd287bed3ad2ef8214d5c01 | p4@uc009bpa.1 |
| 1.66e-65 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_1e7f70c7fdd287bed3ad2ef8214d5c01 | p4@uc009bpa.1 |
| 1.86e-64 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_a97c8f53a971f57f768155dbac4c10e8 | p8@uc009bpa.1 |
| 1.86e-64 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_a97c8f53a971f57f768155dbac4c10e8 | p8@uc009bpa.1 |
| 8.23e-63 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_cdbd9bfa61e28079da351b63aa126693 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 8.23e-63 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_cdbd9bfa61e28079da351b63aa126693 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 1.32e-61 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_9dde089d18a4e65d1389b168950c3449 | p@chr12:108361918..108361930, - |
| 1.32e-61 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_9dde089d18a4e65d1389b168950c3449 | p@chr12:108361918..108361930, - |
| 1.32e-61 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_9dde089d18a4e65d1389b168950c3449 | p@chr6:41491752..41491776, - |
| 1.32e-61 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_9dde089d18a4e65d1389b168950c3449 | p@chr6:41491752..41491776, - |
| 2.27e-60 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_9faa3b100e643259057617cf86fdf068 | p2@ENSMUST00000103283 |
| 2.27e-60 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_9faa3b100e643259057617cf86fdf068 | p2@ENSMUST00000103283 |
| 2.83e-60 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_3b2d268fc6e038fc6b1298bf880b33d9 | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 2.83e-60 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_3b2d268fc6e038fc6b1298bf880b33d9 | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:68527632..68527634,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr12:68527632..68527634, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009400..9009412,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009400..9009412, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9017236..9017243,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9017236..9017243, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11037034..11037039,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p4@PRH1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11033561..11033572,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr12:11033561..11033572, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:2476301..2476302,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr11:2476301..2476302, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70859008..70859019,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70859008..70859019, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11033611..11033616,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr12:11033611..11033616, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:27652420..27652431,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:27652420..27652431, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11033624..11033630,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr12:11033624..11033630, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:10412881..10412883,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:10412881..10412883, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31761938..31761953,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31761938..31761953, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31767403..31767414,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31767403..31767414, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr18:4264585..4264594,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p4@LOC284215 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70861849..70861868,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70861849..70861868, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr17:80849228..80849258,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr17:80849228..80849258, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31756995..31757006,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p5@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009415..9009422,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009415..9009422, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9017270..9017274,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9017270..9017274, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:49942143..49942148,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr14:49942143..49942148, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:21489085..21489115,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p62@NDRG2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009469..9009476,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009469..9009476, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763221..31763230,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763221..31763230, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009350..9009358,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009350..9009358, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763207..31763219,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763207..31763219, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70858987..70858995,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70858987..70858995, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:30756513..30756541,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr11:30756513..30756541, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70866637..70866642,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70866637..70866642, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31761911..31761920,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31761911..31761920, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11035682..11035705,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p4@PRR4 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70859246..70859275,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70859246..70859275, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70867977..70867982,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70867977..70867982, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31760756..31760778,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31760756..31760778, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763312..31763323,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763312..31763323, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:12466842..12466843,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr10:12466842..12466843, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31760791..31760799,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31760791..31760799, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31761883..31761894,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31761883..31761894, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr17:66624163..66624180,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p2@AL117652 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr16:73108040..73108043,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr16:73108040..73108043, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11037049..11037056,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p5@PRH1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:104159271..104159273,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:104159271..104159273, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:55224189..55224198,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p9@MUCL1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:23858235..23858249,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:23858235..23858249, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70868063..70868067,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70868063..70868067, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70868036..70868047,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70868036..70868047, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70866646..70866651,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70866646..70866651, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31755975..31755986,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p2@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:10569527..10569554,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr3:10569527..10569554, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763318..31763328,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763318..31763328, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31768317..31768326,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31768317..31768326, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70902060..70902081,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70902060..70902081, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31765997..31766004,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p12@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009379..9009420,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009379..9009420, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763276..31763283,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763276..31763283, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31757056..31757062,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p9@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70898918..70898937,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70898918..70898937, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70898896..70898917,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70898896..70898917, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11035201..11035242,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p6@PRR4 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009454..9009492,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009454..9009492, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70868002..70868008,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70868002..70868008, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31756965..31756990,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p4@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31760813..31760814,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31760813..31760814, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:65506801..65506806,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:65506801..65506806, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:11083291..11083303,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr12:11083291..11083303, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:49942109..49942118,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr14:49942109..49942118, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009335..9009343,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009335..9009343, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:41448820..41448825,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p13@CTPS |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31760848..31760853,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31760848..31760853, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:70898882..70898894,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:70898882..70898894, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr15:95746149..95746154,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr15:95746149..95746154, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31749574..31749588,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p3@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31756941..31756949,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p8@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31765977..31765983,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p13@BPIFA2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31763234..31763252,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31763234..31763252, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9022642..9022656,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9022642..9022656, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:33651567..33651572,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:33651567..33651572, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:49942089..49942094,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr14:49942089..49942094, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:23860113..23860123,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:23860113..23860123, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:9009368..9009378,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:9009368..9009378, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr15:91304387..91304431,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr15:91304387..91304431, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:58702315..58702317,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr1:58702315..58702317, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:146782922..146782938,-#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr4:146782922..146782938, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:69012249..69012259,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p19@RAD51B |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:55224312..55224339,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p6@MUCL1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:31760737..31760740,+#_9a791fe5b9b9a690da5a2878b5fecdbc | p@chr20:31760737..31760740, + |
