UBERON:0007029: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0007029
|name=surface
|namespace=
|def=
|xref=AEO:0000154;;BILA:0000118;;EHDAA2:0003154;;galen:Surface;;ncithesaurus:Surface
|is_a=UBERON:0000475
|s...") |
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Revision as of 17:24, 15 June 2012
| Name: | surface | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "skin" RELATED [BILA:0000118] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000475(organism subdivision) |
|---|
Children
| is a: | FF:0011174 (Skin - armpit hair follicle),FF:0011178 (Skin - torso) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10283-104F4
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10311-104I5
- 10314-104I8
- 10315-104I9
- 10339-105C6
- 10342-105C9
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10283-104F4
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10311-104I5
- 10314-104I8
- 10315-104I9
- 10339-105C6
- 10342-105C9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007029 (surface), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:31655265..31655269,-#_215ed386776fb31834a2f621d0739769 | p1@KRTAP24-1 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:38956205..38956214,-#_215ed386776fb31834a2f621d0739769 | p1@KRT28 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:38956205..38956214,-#_215ed386776fb31834a2f621d0739769 | p1@KRT28 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:31655265..31655269,-#_215ed386776fb31834a2f621d0739769 | p1@KRTAP24-1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:52967622..52967628,-#_215ed386776fb31834a2f621d0739769 | p1@KRT74 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:61209658..61209665,+#_215ed386776fb31834a2f621d0739769 | p@chr18:61209658..61209665, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:65779676..65779683,+#_215ed386776fb31834a2f621d0739769 | p12@CST6 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:61209658..61209665,+#_215ed386776fb31834a2f621d0739769 | p@chr18:61209658..61209665, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:52685312..52685319,-#_215ed386776fb31834a2f621d0739769 | p11@KRT81 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:45978676..45978679,-#_215ed386776fb31834a2f621d0739769 | p1@KRTAP10-3 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:52995291..52995294,-#_215ed386776fb31834a2f621d0739769 | p5@KRT72 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:45978676..45978679,-#_215ed386776fb31834a2f621d0739769 | p1@KRTAP10-3 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:46047009..46047014,+#_215ed386776fb31834a2f621d0739769 | p1@KRTAP10-9 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:46047009..46047014,+#_215ed386776fb31834a2f621d0739769 | p1@KRTAP10-9 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:52967622..52967628,-#_215ed386776fb31834a2f621d0739769 | p1@KRT74 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:52995291..52995294,-#_215ed386776fb31834a2f621d0739769 | p5@KRT72 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:52685312..52685319,-#_215ed386776fb31834a2f621d0739769 | p11@KRT81 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:65779676..65779683,+#_215ed386776fb31834a2f621d0739769 | p12@CST6 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39341160..39341165,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr20:32782404..32782412,+#_497d25ccfd5e80f203e641088dcdc17a | p4@AY805391 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39341160..39341165,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-5 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:179242347..179242350,+#_497d25ccfd5e80f203e641088dcdc17a | p@chr1:179242347..179242350, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-5 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP9-3, p1@KRTAP9-9 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr20:32782404..32782412,+#_497d25ccfd5e80f203e641088dcdc17a | p4@AY805391 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP9-3, p1@KRTAP9-9 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39316998..39317001,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-4 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39316998..39317001,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-4 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP9-8 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP9-8 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-3 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_497d25ccfd5e80f203e641088dcdc17a | p1@KRTAP4-2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:179242347..179242350,+#_497d25ccfd5e80f203e641088dcdc17a | p@chr1:179242347..179242350, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_d43a772774811130563be0d8baeac908 | p@chr12:53068889..53068898, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:11502792..11502801,-#_d43a772774811130563be0d8baeac908 | p@chrX:11502792..11502801, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr15:89665804..89665808,-#_d43a772774811130563be0d8baeac908 | p@chr15:89665804..89665808, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:31342233..31342240,+#_d43a772774811130563be0d8baeac908 | p@chr7:31342233..31342240, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr15:89665804..89665808,-#_d43a772774811130563be0d8baeac908 | p@chr15:89665804..89665808, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:31342233..31342240,+#_d43a772774811130563be0d8baeac908 | p@chr7:31342233..31342240, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_d43a772774811130563be0d8baeac908 | p@chr12:53068889..53068898, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:11502792..11502801,-#_d43a772774811130563be0d8baeac908 | p@chrX:11502792..11502801, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:28728570..28728577,-#_d43a772774811130563be0d8baeac908 | p@chr18:28728570..28728577, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39123197..39123201,-#_d43a772774811130563be0d8baeac908 | p2@KRT39 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39123197..39123201,-#_d43a772774811130563be0d8baeac908 | p2@KRT39 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:28728570..28728577,-#_d43a772774811130563be0d8baeac908 | p@chr18:28728570..28728577, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_702081009f50edcdcd39843490e9a378 | p2@Pla2g2f |
| 1.4e-86 | FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_702081009f50edcdcd39843490e9a378 | p@chr13:113381448..113381495, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_702081009f50edcdcd39843490e9a378 | p@chr11:99227413..99227429, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_702081009f50edcdcd39843490e9a378 | p@chr5:137057540..137057550, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_702081009f50edcdcd39843490e9a378 | p@chr5:137057540..137057550, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_702081009f50edcdcd39843490e9a378 | p@chr13:113381448..113381495, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_702081009f50edcdcd39843490e9a378 | p1@Skint11 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_702081009f50edcdcd39843490e9a378 | p@chr1:191609138..191609151, + |
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_702081009f50edcdcd39843490e9a378 | p@chr11:36246521..36246530, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_702081009f50edcdcd39843490e9a378 | p@chr1:191609138..191609151, + |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_702081009f50edcdcd39843490e9a378 | p@chr11:36246521..36246530, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_702081009f50edcdcd39843490e9a378 | p2@Dlx3 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_702081009f50edcdcd39843490e9a378 | p2@Skint11 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_702081009f50edcdcd39843490e9a378 | p1@Krt74 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_702081009f50edcdcd39843490e9a378 | p1@Krt74 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_702081009f50edcdcd39843490e9a378 | p@chr11:99227413..99227429, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_702081009f50edcdcd39843490e9a378 | p2@Pla2g2f |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_702081009f50edcdcd39843490e9a378 | p1@Skint11 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_702081009f50edcdcd39843490e9a378 | p2@Dlx3 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_702081009f50edcdcd39843490e9a378 | p2@Skint11 |
| 1.07e-72 | FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr1:46949894..46949911, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_2704d67912d257f63d4c5ca1b983b1ab | p1@Pnpla5 |
| 1.07e-72 | FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr3:90343597..90343613, + |
| 1.07e-72 | FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr3:90343597..90343613, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr1:46949894..46949911, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr11:99207849..99207853, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr5:137057441..137057450, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr7:97432305..97432311, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr7:97432305..97432311, + |
| 1.07e-72 | FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr7:127260268..127260277, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_2704d67912d257f63d4c5ca1b983b1ab | p@chr7:127260268..127260277, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr5:137057490..137057506, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr5:137057441..137057450, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_2704d67912d257f63d4c5ca1b983b1ab | p6@Mfsd4 |
| 1.07e-72 | FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr11:99207849..99207853, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_2704d67912d257f63d4c5ca1b983b1ab | p@chr5:137057490..137057506, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_2704d67912d257f63d4c5ca1b983b1ab | p6@Mfsd4 |
| 1.07e-72 | FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_2704d67912d257f63d4c5ca1b983b1ab | p1@Pnpla5 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_c193ca6562b58ac44957b3db220e7e58 | p25@Myo10 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_c193ca6562b58ac44957b3db220e7e58 | p2@Lyg2 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_c193ca6562b58ac44957b3db220e7e58 | p@chr10:66991117..66991146, + |
| 1.5e-72 | FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_c193ca6562b58ac44957b3db220e7e58 | p1@Lyg2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_c193ca6562b58ac44957b3db220e7e58 | p@chr10:66991117..66991146, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_c193ca6562b58ac44957b3db220e7e58 | p1@Lyg2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_c193ca6562b58ac44957b3db220e7e58 | p@chr10:43724117..43724131, - |
| 1.5e-72 | FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_c193ca6562b58ac44957b3db220e7e58 | p@chr3:138004932..138004945, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_c193ca6562b58ac44957b3db220e7e58 | p1@Actbl2 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_c193ca6562b58ac44957b3db220e7e58 | p@chr3:138004932..138004945, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_c193ca6562b58ac44957b3db220e7e58 | p@chr6:134595955..134595965, - |
| 1.5e-72 | FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_c193ca6562b58ac44957b3db220e7e58 | p1@Actbl2 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_c193ca6562b58ac44957b3db220e7e58 | p@chr6:97778311..97778326, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_c193ca6562b58ac44957b3db220e7e58 | p25@Myo10 |
