UBERON:0001870: Difference between revisions
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|def="Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border." [Wikipedia:Frontal_lobe] | |def="Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border." [Wikipedia:Frontal_lobe] | ||
|xref=BM:Tel-Cx-FR;;BTO:0000484;;EFO:0000913;;EV:0100167;;FMA:61824;;GAID:674;;http://upload.wikimedia.org/wikipedia/commons/thumb/b/b4/Gray729.png/200px-Gray729.png;;MA:0000905;;MAT:0000505;;MESH:A.08.186.211.730.885.213.270;;ncithesaurus:Frontal_Lobe;;NIF_GrossAnatomy:birnlex_928;;NIF_GrossAnatomy:nlx_anat_20090601;;OpenCyc:Mx4rv3OJ8JwpEbGdrcN5Y29ycA;;SCTID:180920004 | |xref=BM:Tel-Cx-FR;;BTO:0000484;;EFO:0000913;;EV:0100167;;FMA:61824;;GAID:674;;http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray729.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/b/b4/Gray729.png/200px-Gray729.png;;MA:0000905;;MAT:0000505;;MESH:A.08.186.211.730.885.213.270;;ncithesaurus:Frontal_Lobe;;NIF_GrossAnatomy:birnlex_928;;NIF_GrossAnatomy:nlx_anat_20090601;;OpenCyc:Mx4rv3OJ8JwpEbGdrcN5Y29ycA;;SCTID:180920004 | ||
|is_a=UBERON:0000064;;UBERON:0004121 | |is_a=UBERON:0000064;;UBERON:0004121 | ||
|synonym="frontal lobe" EXACT [FMA:61824];;"frontal region" EXACT [];;"regio frontalis" EXACT [FMA:61824, FMA:TA] | |synonym="frontal lobe" EXACT [FMA:61824];;"frontal region" EXACT [];;"lobus frontalis" RELATED LATIN [Wikipedia:Frontal_lobe];;"regio frontalis" EXACT [FMA:61824, FMA:TA] | ||
|comment=Editor note: Many species don't have lobes but they do have frontal cortex. Lobe isn't a really well defined term though [MM] | |comment=Editor note: Many species don't have lobes but they do have frontal cortex. Lobe isn't a really well defined term though [MM] | ||
|alt_id=UBERON:FMA_61824-MA_0000905 | |alt_id=UBERON:FMA_61824-MA_0000905 | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim | |subset=uberon_slim | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:00, 26 June 2012
| Name: | frontal cortex | ||
|---|---|---|---|
| Definition: | "Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border." [Wikipedia:Frontal_lobe] | ||
| Xrefs: |
| ||
| Synonyms: |
"frontal lobe" EXACT [FMA:61824] "frontal region" EXACT [] "lobus frontalis" RELATED LATIN [Wikipedia:Frontal_lobe] "regio frontalis" EXACT [FMA:61824, FMA:TA] | ||
| Comments: | Editor note: Many species don't have lobes but they do have frontal cortex. Lobe isn't a really well defined term though [MM] | ||
| Alt_id: | UBERON:FMA_61824-MA_0000905 | ||
| Subset: | uberon_slim |
Gray729.png]
200px-Gray729.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure) |
|---|
Children
| derives from: | FF:0010040 (human frontal lobe - adult sample) |
|---|---|
| part of: | UBERON:0002702 (middle frontal gyrus),UBERON:0015593 (frontal gyrus) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10150-102I6 (medial frontal gyrus, adult, donor10252)
- 10170-103B8 (medial frontal gyrus - adult, donor10196)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10368-105F8 (medial frontal gyrus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001870 (frontal cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.78e-118 | FFCP PHASE1:Hg19::chr4:176828307..176828316,-#_f4cad9e52bf0066fd1dd5690f753114b | p35@GPM6A |
| 7.78e-118 | FFCP PHASE2:Hg19::chr4:176828307..176828316,-#_f4cad9e52bf0066fd1dd5690f753114b | p35@GPM6A |
| 1.52e-87 | FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_98a78fc70904259170d399847842994d | p@chr5:160720498..160720507, - |
| 1.52e-87 | FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_98a78fc70904259170d399847842994d | p@chr5:160720498..160720507, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr2:179693063..179693074,+#_9b9b2616b100bd0e601477c6293f2a54 | p@chr2:179693063..179693074, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr2:179693063..179693074,+#_9b9b2616b100bd0e601477c6293f2a54 | p@chr2:179693063..179693074, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr6:133275544..133275556,+#_9b9b2616b100bd0e601477c6293f2a54 | p@chr6:133275544..133275556, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr6:133275544..133275556,+#_9b9b2616b100bd0e601477c6293f2a54 | p@chr6:133275544..133275556, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr8:24773140..24773144,+#_045e27b854b456d25b1cd1e0ea1ed9b6 | p20@NEFM |
| 4.68e-66 | FFCP PHASE1:Hg19::chrX:12083655..12083665,+#_045e27b854b456d25b1cd1e0ea1ed9b6 | p@chrX:12083655..12083665, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chrX:12083655..12083665,+#_045e27b854b456d25b1cd1e0ea1ed9b6 | p@chrX:12083655..12083665, + |
| 4.68e-66 | FFCP PHASE1:Hg19::chr8:24773140..24773144,+#_045e27b854b456d25b1cd1e0ea1ed9b6 | p20@NEFM |
| 3.65e-60 | FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_efe5ab200f931e41399c4954770d8e92 | p@chr21:16999470..16999481, - |
| 3.65e-60 | FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_efe5ab200f931e41399c4954770d8e92 | p@chr21:16999470..16999481, - |
| 5.46e-60 | FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_168340e5becdfc460f5d637533d4720b | p@chr18:5721892..5721909, + |
| 5.46e-60 | FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_168340e5becdfc460f5d637533d4720b | p@chr18:5721892..5721909, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr12:75601501..75601517,-#_2f6486e32605d8a2abdf8cd49a475fd1 | p11@KCNC2 |
| 1.83e-59 | FFCP PHASE2:Hg19::chr12:75601501..75601517,-#_2f6486e32605d8a2abdf8cd49a475fd1 | p11@KCNC2 |
| 2.23e-59 | FFCP PHASE2:Hg19::chr12:55368219..55368234,-#_79d5c0ffad17e236b715519495a70fa4 | p@chr12:55368219..55368234, - |
| 2.23e-59 | FFCP PHASE1:Hg19::chr12:55368219..55368234,-#_79d5c0ffad17e236b715519495a70fa4 | p@chr12:55368219..55368234, - |
| 2.61e-54 | FFCP PHASE1:Hg19::chr2:73493786..73493808,-#_043a006cc24734cd788a910e5bf40eac | p10@FBXO41 |
| 2.61e-54 | FFCP PHASE2:Hg19::chr2:73493786..73493808,-#_043a006cc24734cd788a910e5bf40eac | p10@FBXO41 |
| 3.13e-54 | FFCP PHASE2:Hg19::chr12:120240554..120240562,-#_40332edce0484a3a9d9711866aa4b871 | p@chr12:120240554..120240562, - |
| 3.13e-54 | FFCP PHASE1:Hg19::chr12:120240554..120240562,-#_40332edce0484a3a9d9711866aa4b871 | p@chr12:120240554..120240562, - |
| 3.76e-54 | FFCP PHASE2:Hg19::chr7:39018373..39018384,+#_5103f150022fdada07db28f597b96643 | p@chr7:39018373..39018384, + |
| 3.76e-54 | FFCP PHASE1:Hg19::chr7:39018373..39018384,+#_5103f150022fdada07db28f597b96643 | p@chr7:39018373..39018384, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_87fef0000773566bdb1915c89fbdeb6b | p@chr2:17830681..17830687, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_87fef0000773566bdb1915c89fbdeb6b | p@chr2:17830681..17830687, + |
| 4.89e-53 | FFCP PHASE1:Hg19::chr6:133275530..133275540,+#_7e0b6d220781c8a5bc3537e04f90c6d4 | p@chr6:133275530..133275540, + |
| 4.89e-53 | FFCP PHASE2:Hg19::chr6:133275530..133275540,+#_7e0b6d220781c8a5bc3537e04f90c6d4 | p@chr6:133275530..133275540, + |
| 6.39e-53 | FFCP PHASE2:Hg19::chr13:99174373..99174384,-#_63c5efe6dbefe0dbd8d837691a8e4e4b | p20@STK24 |
| 6.39e-53 | FFCP PHASE1:Hg19::chr13:99174373..99174384,-#_63c5efe6dbefe0dbd8d837691a8e4e4b | p20@STK24 |
| 9.6e-51 | FFCP PHASE1:Hg19::chr2:220812508..220812521,+#_7647dd24a967a56c4dbf377deb63a1dc | p@chr2:220812508..220812521, + |
| 9.6e-51 | FFCP PHASE2:Hg19::chr2:220812508..220812521,+#_7647dd24a967a56c4dbf377deb63a1dc | p@chr2:220812508..220812521, + |
| 3.13e-50 | FFCP PHASE1:Hg19::chr12:91069081..91069092,+#_b95e5286c973c87ec33b46d04459a2b3 | p@chr12:91069081..91069092, + |
| 3.13e-50 | FFCP PHASE2:Hg19::chr12:91069081..91069092,+#_b95e5286c973c87ec33b46d04459a2b3 | p@chr12:91069081..91069092, + |
| 5.18e-50 | FFCP PHASE1:Hg19::chr3:123813487..123813494,+#_bc0559c7bd994a8ef426eac98d441aa8 | p22@KALRN |
| 5.18e-50 | FFCP PHASE2:Hg19::chr3:123813487..123813494,+#_bc0559c7bd994a8ef426eac98d441aa8 | p22@KALRN |
| 6.12e-50 | FFCP PHASE1:Hg19::chr17:57604227..57604236,-#_1810109cb36c38e86c721bfb67c4221a | p@chr17:57604227..57604236, - |
| 6.12e-50 | FFCP PHASE2:Hg19::chr17:57604227..57604236,-#_1810109cb36c38e86c721bfb67c4221a | p@chr17:57604227..57604236, - |
| 8.56e-50 | FFCP PHASE1:Hg19::chr14:71679425..71679447,+#_e9cf6aa91dc4bb4f2f998d8942f2338a | p1@ENST00000553621 |
| 8.56e-50 | FFCP PHASE1:Hg19::chr10:68687632..68687644,+#_e9cf6aa91dc4bb4f2f998d8942f2338a | p3@LRRTM3 |
| 8.56e-50 | FFCP PHASE2:Hg19::chr10:68687632..68687644,+#_e9cf6aa91dc4bb4f2f998d8942f2338a | p3@LRRTM3 |
| 8.56e-50 | FFCP PHASE2:Hg19::chr14:71679425..71679447,+#_e9cf6aa91dc4bb4f2f998d8942f2338a | p1@ENST00000553621 |
| 1.2e-49 | FFCP PHASE1:Hg19::chr2:76412119..76412138,+#_c92096bc79e1a380f24a96e413320a96 | p@chr2:76412119..76412138, + |
| 1.2e-49 | FFCP PHASE2:Hg19::chr2:76412119..76412138,+#_c92096bc79e1a380f24a96e413320a96 | p@chr2:76412119..76412138, + |
| 1.41e-49 | FFCP PHASE2:Hg19::chr3:123813509..123813520,+#_442182b91e02880b0fc3fa32a038d038 | p23@KALRN |
| 1.41e-49 | FFCP PHASE1:Hg19::chr3:123813509..123813520,+#_442182b91e02880b0fc3fa32a038d038 | p23@KALRN |
| 1.67e-49 | FFCP PHASE1:Hg19::chr8:56446949..56446952,+#_f876c60a71df1e6692333bd51262ff30 | p@chr8:56446949..56446952, + |
| 1.67e-49 | FFCP PHASE2:Hg19::chr8:56446949..56446952,+#_f876c60a71df1e6692333bd51262ff30 | p@chr8:56446949..56446952, + |
| 4.73e-47 | FFCP PHASE2:Hg19::chr4:118292684..118292695,+#_4ef2c61f9b3537c6589c143e98ac98f1 | p@chr4:118292684..118292695, + |
| 4.73e-47 | FFCP PHASE1:Hg19::chr4:118292684..118292695,+#_4ef2c61f9b3537c6589c143e98ac98f1 | p@chr4:118292684..118292695, + |
| 2.62e-46 | FFCP PHASE1:Hg19::chr5:68290656..68290670,-#_d702a2907ac4f5e67cfe0cc86685cb6c | p@chr5:68290656..68290670, - |
| 2.62e-46 | FFCP PHASE2:Hg19::chr5:68290656..68290670,-#_d702a2907ac4f5e67cfe0cc86685cb6c | p@chr5:68290656..68290670, - |
| 3.06e-46 | FFCP PHASE1:Hg19::chr4:118292629..118292651,+#_486d6004b7438b9cc781152e30d61579 | p@chr4:118292629..118292651, + |
| 3.06e-46 | FFCP PHASE2:Hg19::chr4:118292629..118292651,+#_486d6004b7438b9cc781152e30d61579 | p@chr4:118292629..118292651, + |
| 5.68e-46 | FFCP PHASE1:Hg19::chr12:79611406..79611425,+#_9963b5d808ec47aef3d7ef3994cbd414 | p4@AB384875 |
| 5.68e-46 | FFCP PHASE2:Hg19::chr12:79611406..79611425,+#_9963b5d808ec47aef3d7ef3994cbd414 | p4@AB384875 |
| 6.25e-45 | FFCP PHASE1:Hg19::chr7:107302674..107302681,-#_a234c0344042b3604f365afbabe7f43b | p3@ENST00000449741 |
| 6.25e-45 | FFCP PHASE2:Hg19::chr7:107302674..107302681,-#_a234c0344042b3604f365afbabe7f43b | p3@ENST00000449741 |
| 9.77e-45 | FFCP PHASE1:Hg19::chr5:143108438..143108440,-#_87b969845d3c803aecf1d33366661c02 | p@chr5:143108438..143108440, - |
| 9.77e-45 | FFCP PHASE2:Hg19::chr5:143108438..143108440,-#_87b969845d3c803aecf1d33366661c02 | p@chr5:143108438..143108440, - |
| 9.77e-45 | FFCP PHASE1:Hg19::chr8:4174981..4174993,+#_87b969845d3c803aecf1d33366661c02 | p@chr8:4174981..4174993, + |
| 9.77e-45 | FFCP PHASE2:Hg19::chr8:4174981..4174993,+#_87b969845d3c803aecf1d33366661c02 | p@chr8:4174981..4174993, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr10:64136269..64136280,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55 | p8@ZNF365 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr10:64136269..64136280,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55 | p8@ZNF365 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr13:53938493..53938506,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55 | p@chr13:53938493..53938506, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr13:53938493..53938506,+#_5ac94b86fa0d098bee0c1b7e1a1d6e55 | p@chr13:53938493..53938506, + |
| 1.53e-44 | FFCP PHASE2:Hg19::chr14:76241802..76241811,+#_5d1f1451e02e21d277971e6022869027 | p@chr14:76241802..76241811, + |
| 1.53e-44 | FFCP PHASE1:Hg19::chr14:76241802..76241811,+#_5d1f1451e02e21d277971e6022869027 | p@chr14:76241802..76241811, + |
| 1.53e-44 | FFCP PHASE1:Hg19::chr1:6094185..6094192,-#_5d1f1451e02e21d277971e6022869027 | p@chr1:6094185..6094192, - |
| 1.53e-44 | FFCP PHASE2:Hg19::chr1:6094185..6094192,-#_5d1f1451e02e21d277971e6022869027 | p@chr1:6094185..6094192, - |
| 1.91e-44 | FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_0ebd37e6b4a36550408a53cc23011923 | p@chr2:86707340..86707351, + |
| 1.91e-44 | FFCP PHASE2:Hg19::chr18:70210391..70210400,-#_0ebd37e6b4a36550408a53cc23011923 | p@chr18:70210391..70210400, - |
| 1.91e-44 | FFCP PHASE1:Hg19::chr17:29623088..29623102,-#_0ebd37e6b4a36550408a53cc23011923 | p6@OMG |
| 1.91e-44 | FFCP PHASE2:Hg19::chr17:29623088..29623102,-#_0ebd37e6b4a36550408a53cc23011923 | p6@OMG |
| 1.91e-44 | FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_0ebd37e6b4a36550408a53cc23011923 | p@chr2:86707340..86707351, + |
| 1.91e-44 | FFCP PHASE1:Hg19::chr18:70210391..70210400,-#_0ebd37e6b4a36550408a53cc23011923 | p@chr18:70210391..70210400, - |
| 2.38e-44 | FFCP PHASE2:Hg19::chr1:36181014..36181023,-#_8c26389aa94e43c25340e3092aece1ec | p@chr1:36181014..36181023, - |
| 2.38e-44 | FFCP PHASE1:Hg19::chr1:36181014..36181023,-#_8c26389aa94e43c25340e3092aece1ec | p@chr1:36181014..36181023, - |
| 5.19e-44 | FFCP PHASE2:Hg19::chr12:45307764..45307772,-#_d02747af90b63357e14d8eba084b382c | p16@NELL2 |
| 5.19e-44 | FFCP PHASE1:Hg19::chr12:45307764..45307772,-#_d02747af90b63357e14d8eba084b382c | p16@NELL2 |
| 6.0e-44 | FFCP PHASE1:Hg19::chr21:16999573..16999589,-#_23e0a347051773951016b9f5de73862f | p@chr21:16999573..16999589, - |
| 6.0e-44 | FFCP PHASE2:Hg19::chr21:16999573..16999589,-#_23e0a347051773951016b9f5de73862f | p@chr21:16999573..16999589, - |
| 1.92e-43 | FFCP PHASE2:Hg19::chr12:90987338..90987355,+#_bd0b6f334623b88b7fa0abac755da991 | p@chr12:90987338..90987355, + |
| 1.92e-43 | FFCP PHASE1:Hg19::chr12:90987338..90987355,+#_bd0b6f334623b88b7fa0abac755da991 | p@chr12:90987338..90987355, + |
| 2.95e-43 | FFCP PHASE1:Hg19::chr4:90625735..90625756,-#_7083ca3d76fb104379db9a49259c0103 | p@chr4:90625735..90625756, - |
| 2.95e-43 | FFCP PHASE2:Hg19::chr4:90625735..90625756,-#_7083ca3d76fb104379db9a49259c0103 | p@chr4:90625735..90625756, - |
| 3.94e-43 | FFCP PHASE1:Hg19::chr18:35145465..35145472,-#_7fd22fd354cb0f98141dd1a151003a54 | p10@CELF4 |
| 3.94e-43 | FFCP PHASE2:Hg19::chr18:35145465..35145472,-#_7fd22fd354cb0f98141dd1a151003a54 | p10@CELF4 |
| 4.55e-43 | FFCP PHASE1:Hg19::chr8:48758335..48758346,-#_17361db7a65b4978355b9a2a181805c7 | p@chr8:48758335..48758346, - |
| 4.55e-43 | FFCP PHASE2:Hg19::chr8:48758335..48758346,-#_17361db7a65b4978355b9a2a181805c7 | p@chr8:48758335..48758346, - |
| 5.25e-43 | FFCP PHASE1:Hg19::chr4:88451026..88451042,-#_b03fb04185de5835f1dbff65ae7412e0 | p15@SPARCL1 |
| 5.25e-43 | FFCP PHASE2:Hg19::chr4:88451026..88451042,-#_b03fb04185de5835f1dbff65ae7412e0 | p15@SPARCL1 |
| 5.25e-43 | FFCP PHASE1:Hg19::chr5:160717223..160717234,-#_b03fb04185de5835f1dbff65ae7412e0 | p@chr5:160717223..160717234, - |
| 5.25e-43 | FFCP PHASE1:Hg19::chr4:88449898..88449925,-#_b03fb04185de5835f1dbff65ae7412e0 | p14@SPARCL1 |
| 5.25e-43 | FFCP PHASE2:Hg19::chr4:88449898..88449925,-#_b03fb04185de5835f1dbff65ae7412e0 | p14@SPARCL1 |
| 5.25e-43 | FFCP PHASE2:Hg19::chr5:160717223..160717234,-#_b03fb04185de5835f1dbff65ae7412e0 | p@chr5:160717223..160717234, - |
| 8.09e-43 | FFCP PHASE2:Hg19::chr7:14942334..14942341,-#_1d94bdf2ad19473f7fd1437178079416 | p9@DGKB |
| 8.09e-43 | FFCP PHASE1:Hg19::chr7:14942334..14942341,-#_1d94bdf2ad19473f7fd1437178079416 | p9@DGKB |
