Personal tools

UBERON:0003886: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Latest revision as of 17:04, 26 June 2012

Name:body cavity precursor

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002553(anatomical cavity)



Children

is a:UBERON:0003887 (intraembryonic coelom)
develops from:UBERON:0002323 (body cavity)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003886 (body cavity precursor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.65e-40FFCP PHASE1:Mm9::chr2:164481543..164481613,+#_ca947c16257249b5bfa6bd780ad3ab1cp1@Wfdc10
2.65e-40FFCP PHASE2:Mm9::chr2:164481543..164481613,+#_ca947c16257249b5bfa6bd780ad3ab1cp1@Wfdc10
2.59e-39FFCP PHASE2:Mm9::chr16:5227918..5227923,-#_68f013a1efb69cf6a7d570797aef6cafp@chr16:5227918..5227923, -
2.59e-39FFCP PHASE1:Mm9::chr16:5227918..5227923,-#_68f013a1efb69cf6a7d570797aef6cafp@chr16:5227918..5227923, -
2.18e-33FFCP PHASE2:Mm9::chr7:52741629..52741644,+#_1d735bd131752fd1644a080823cb6952p7@Tulp2
2.18e-33FFCP PHASE1:Mm9::chr7:52741629..52741644,+#_1d735bd131752fd1644a080823cb6952p7@Tulp2
3.03e-33FFCP PHASE2:Mm9::chrX:130516261..130516293,-#_6ec2f77e6e312f86469ce0c5029e03c8p2@Sytl4
3.03e-33FFCP PHASE1:Mm9::chrX:130516261..130516293,-#_6ec2f77e6e312f86469ce0c5029e03c8p2@Sytl4
3.71e-30FFCP PHASE1:Mm9::chr2:104966659..104966672,-#_a33d31fa8ba19eeac507fb9bc40d438ep1@AI314831
3.71e-30FFCP PHASE2:Mm9::chr2:104966659..104966672,-#_a33d31fa8ba19eeac507fb9bc40d438ep1@AI314831
3.97e-30FFCP PHASE2:Mm9::chr1:157079840..157079859,-#_0914b19f0cd6afed3737683d298912bfp1@BC034090
3.97e-30FFCP PHASE1:Mm9::chr1:157079840..157079859,-#_0914b19f0cd6afed3737683d298912bfp1@BC034090
8.06e-30FFCP PHASE1:Mm9::chr2:104966545..104966586,-#_04f8d96ddaf1d7a4dfe8ded27fae1182p1@ENSMUST00000174870
8.06e-30FFCP PHASE2:Mm9::chr2:104966545..104966586,-#_04f8d96ddaf1d7a4dfe8ded27fae1182p1@ENSMUST00000174870
9.96e-30FFCP PHASE2:Mm9::chr17:28644343..28644394,-#_854af94121770a22fc6f9667a0c4a6c0p3@Fkbp5
9.96e-30FFCP PHASE1:Mm9::chr17:28644343..28644394,-#_854af94121770a22fc6f9667a0c4a6c0p3@Fkbp5
1.2e-29FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_d947134665b88906836ebe46b42609c2p1@Mael
1.2e-29FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_d947134665b88906836ebe46b42609c2p1@Mael
4.64e-29FFCP PHASE2:Mm9::chr4:141375242..141375280,-#_acf2b413073a1f4ce22feb85c052ca35p3@Cela2a
4.64e-29FFCP PHASE1:Mm9::chr4:141375242..141375280,-#_acf2b413073a1f4ce22feb85c052ca35p3@Cela2a
4.64e-29FFCP PHASE1:Mm9::chr12:31775417..31775434,-#_acf2b413073a1f4ce22feb85c052ca35p@chr12:31775417..31775434, -
4.64e-29FFCP PHASE2:Mm9::chr12:31775417..31775434,-#_acf2b413073a1f4ce22feb85c052ca35p@chr12:31775417..31775434, -
4.64e-29FFCP PHASE2:Mm9::chr5:26334211..26334241,+#_acf2b413073a1f4ce22feb85c052ca35p@chr5:26334211..26334241, +
4.64e-29FFCP PHASE1:Mm9::chr5:26334211..26334241,+#_acf2b413073a1f4ce22feb85c052ca35p@chr5:26334211..26334241, +
6.08e-29FFCP PHASE2:Mm9::chr3:40512838..40512859,+#_0805dda18ce99ace7003f9ab50f6546bp2@Slc25a31
6.08e-29FFCP PHASE1:Mm9::chr3:40512838..40512859,+#_0805dda18ce99ace7003f9ab50f6546bp2@Slc25a31
6.73e-29FFCP PHASE1:Mm9::chr6:18059038..18059062,-#_6eb13a2761f483a984f1530ba3c88f18p1@Asz1
6.73e-29FFCP PHASE2:Mm9::chr6:18059038..18059062,-#_6eb13a2761f483a984f1530ba3c88f18p1@Asz1
1.74e-28FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_5e4c392be9c53aa2ad29eb19f2630033p1@Cst12
1.74e-28FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_5e4c392be9c53aa2ad29eb19f2630033p1@Cst12
4.4e-28FFCP PHASE1:Mm9::chr7:109015811..109015852,-#_7027422ae482ef67e925ffa373840257p6@Folr1
4.4e-28FFCP PHASE2:Mm9::chr7:109015811..109015852,-#_7027422ae482ef67e925ffa373840257p6@Folr1
5.48e-28FFCP PHASE1:Mm9::chr5:109484637..109484648,+#_b3c0573a5c489ac9e16ec8ff6102e02cp@chr5:109484637..109484648, +
5.48e-28FFCP PHASE2:Mm9::chr5:109484637..109484648,+#_b3c0573a5c489ac9e16ec8ff6102e02cp@chr5:109484637..109484648, +
1.49e-27FFCP PHASE1:Mm9::chr3:107746281..107746297,-#_9d66d0da716b3d866d331c11f30f73fap5@Gstm6
1.49e-27FFCP PHASE2:Mm9::chr3:107746281..107746297,-#_9d66d0da716b3d866d331c11f30f73fap5@Gstm6
1.63e-27FFCP PHASE2:Mm9::chr7:104599826..104599841,+#_3dcdd0260801ca521da93bb63465d2a0p2@Kctd14
1.63e-27FFCP PHASE1:Mm9::chr7:104599826..104599841,+#_3dcdd0260801ca521da93bb63465d2a0p2@Kctd14
2.04e-27FFCP PHASE2:Mm9::chr15:88813324..88813392,+#_952aa0743829c089b77718701dfc2a62p1@Mov10l1
2.04e-27FFCP PHASE1:Mm9::chr15:88813324..88813392,+#_952aa0743829c089b77718701dfc2a62p1@Mov10l1
2.61e-27FFCP PHASE2:Mm9::chr8:4248188..4248219,+#_691952f0af07ba614838790f7e10cc4fp2@Gm14378
2.61e-27FFCP PHASE1:Mm9::chr8:4248188..4248219,+#_691952f0af07ba614838790f7e10cc4fp2@Gm14378
3.68e-27FFCP PHASE1:Mm9::chr3:102740016..102740030,-#_af49c22a63987cf9c68fd495287c32e5p1@Sycp1
3.68e-27FFCP PHASE2:Mm9::chr3:102740016..102740030,-#_af49c22a63987cf9c68fd495287c32e5p1@Sycp1
3.72e-27FFCP PHASE2:Mm9::chr9:69950924..69950949,-#_8331231c1e8fd49e1a912d36f82f1cbfp4@Fam81a
3.72e-27FFCP PHASE1:Mm9::chr9:69950924..69950949,-#_8331231c1e8fd49e1a912d36f82f1cbfp4@Fam81a
4.73e-27FFCP PHASE2:Mm9::chr6:18059063..18059084,-#_4a08ce2eae9f46018549d40dc484ec7cp2@Asz1
4.73e-27FFCP PHASE1:Mm9::chr6:18059063..18059084,-#_4a08ce2eae9f46018549d40dc484ec7cp2@Asz1
6.56e-27FFCP PHASE2:Mm9::chr19:58804381..58804392,+#_d44107b58788f7af0baf520f2cc928dcp@chr19:58804381..58804392, +
6.56e-27FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_d44107b58788f7af0baf520f2cc928dcp3@Cst9
6.56e-27FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_d44107b58788f7af0baf520f2cc928dcp3@Cst9
6.56e-27FFCP PHASE1:Mm9::chr19:58804381..58804392,+#_d44107b58788f7af0baf520f2cc928dcp@chr19:58804381..58804392, +
6.56e-27FFCP PHASE2:Mm9::chr4:62295167..62295182,+#_d44107b58788f7af0baf520f2cc928dcp22@Rgs3
6.56e-27FFCP PHASE1:Mm9::chr6:30494986..30494997,+#_d44107b58788f7af0baf520f2cc928dcp@chr6:30494986..30494997, +
6.56e-27FFCP PHASE1:Mm9::chr4:62295167..62295182,+#_d44107b58788f7af0baf520f2cc928dcp22@Rgs3
6.56e-27FFCP PHASE2:Mm9::chr6:30494986..30494997,+#_d44107b58788f7af0baf520f2cc928dcp@chr6:30494986..30494997, +
6.84e-27FFCP PHASE2:Mm9::chr15:102277099..102277126,+#_3b383dfafd7e53bda715b274cc8e72a8p@chr15:102277099..102277126, +
6.84e-27FFCP PHASE1:Mm9::chr15:102277099..102277126,+#_3b383dfafd7e53bda715b274cc8e72a8p@chr15:102277099..102277126, +
7.19e-27FFCP PHASE2:Mm9::chr15:76701495..76701535,-#_eb7d70734df6f4fbc5a3209d8ae5c9c8p3@Zfp251
7.19e-27FFCP PHASE1:Mm9::chr15:76701495..76701535,-#_eb7d70734df6f4fbc5a3209d8ae5c9c8p3@Zfp251
8.15e-27FFCP PHASE2:Mm9::chr4:129300189..129300196,-#_f8deacbfe9aa8b6604b0045811a0e658p3@Ccdc28b
8.15e-27FFCP PHASE1:Mm9::chr4:129300189..129300196,-#_f8deacbfe9aa8b6604b0045811a0e658p3@Ccdc28b
9.45e-27FFCP PHASE2:Mm9::chr10:81037444..81037483,+#_dccfa7a45caa5e8853331f823a4374b2p5@Tle2
9.45e-27FFCP PHASE1:Mm9::chr10:81037444..81037483,+#_dccfa7a45caa5e8853331f823a4374b2p5@Tle2
1.1e-26FFCP PHASE2:Mm9::chr11:116355895..116355908,-#_ceeb5d3d318d4813fcf414123c02598ep4@Prpsap1
1.1e-26FFCP PHASE1:Mm9::chr11:116355895..116355908,-#_ceeb5d3d318d4813fcf414123c02598ep4@Prpsap1
3.04e-26FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_85b17af6c4a32cb6372f2541dd46fb02p1@NR5A1
3.04e-26FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_85b17af6c4a32cb6372f2541dd46fb02p1@NR5A1
3.76e-26FFCP PHASE2:Mm9::chr7:52741730..52741769,+#_98be32bd4eceae566ce37e732ba0c43bp2@Tulp2
3.76e-26FFCP PHASE1:Mm9::chr7:52741730..52741769,+#_98be32bd4eceae566ce37e732ba0c43bp2@Tulp2
4.31e-26FFCP PHASE1:Mm9::chr5:135825867..135825910,-#_322a412983f3a9a1523f68495f3063ffp1@Fkbp6
4.31e-26FFCP PHASE2:Mm9::chr7:149469129..149469146,+#_322a412983f3a9a1523f68495f3063ffp@chr7:149469129..149469146, +
4.31e-26FFCP PHASE1:Mm9::chr7:149469129..149469146,+#_322a412983f3a9a1523f68495f3063ffp@chr7:149469129..149469146, +
4.31e-26FFCP PHASE2:Mm9::chr5:135825867..135825910,-#_322a412983f3a9a1523f68495f3063ffp1@Fkbp6
4.7e-26FFCP PHASE1:Mm9::chr7:147143936..147143939,-#_5a6e45a2006b3155d057f3724c0d8caep1@Mir202
4.7e-26FFCP PHASE2:Mm9::chr7:147143936..147143939,-#_5a6e45a2006b3155d057f3724c0d8caep1@Mir202
1.11e-25FFCP PHASE2:Mm9::chr3:95363593..95363613,+#_e7b6740135572ba3902550d58730e1d3p1@Hormad1
1.11e-25FFCP PHASE1:Mm9::chr3:95363593..95363613,+#_e7b6740135572ba3902550d58730e1d3p1@Hormad1
1.16e-25FFCP PHASE1:Mm9::chr13:24026303..24026308,+#_589bce5db0bd1d04b1b8b40f52215a69p1@Hist1h2aa
1.16e-25FFCP PHASE2:Mm9::chr13:24026303..24026308,+#_589bce5db0bd1d04b1b8b40f52215a69p1@Hist1h2aa
1.74e-25FFCP PHASE1:Mm9::chr2:38570011..38570034,-#_114037a791729fb98a0544ff5717daabp1@Nr5a1
1.74e-25FFCP PHASE2:Mm9::chr2:38570011..38570034,-#_114037a791729fb98a0544ff5717daabp1@Nr5a1
1.76e-25FFCP PHASE1:Mm9::chr10:81060346..81060374,-#_9e270588a30bc0fac6fe39837bc177f4p1@Tle6
1.76e-25FFCP PHASE2:Mm9::chr10:81060346..81060374,-#_9e270588a30bc0fac6fe39837bc177f4p1@Tle6
1.93e-25FFCP PHASE2:Mm9::chr14:70829178..70829221,-#_c56aa9e965fdcf99dbeecd1f1618019cp1@Piwil2
1.93e-25FFCP PHASE1:Mm9::chr14:70829178..70829221,-#_c56aa9e965fdcf99dbeecd1f1618019cp1@Piwil2
2.31e-25FFCP PHASE1:Mm9::chr9:50369387..50369406,-#_e7fa6852dcc44bc18257e491fff6dd0ep1@Tex12
2.31e-25FFCP PHASE2:Mm9::chr9:50369387..50369406,-#_e7fa6852dcc44bc18257e491fff6dd0ep1@Tex12
2.78e-25FFCP PHASE2:Mm9::chr2:104966713..104966727,-#_f1a7ad33ee360bace627480e77c08aaap2@AI314831
2.78e-25FFCP PHASE1:Mm9::chr2:104966713..104966727,-#_f1a7ad33ee360bace627480e77c08aaap2@AI314831
2.88e-25FFCP PHASE1:Mm9::chr18:47081451..47081490,+#_584b7b2941e8497e6672fb8f9f2bd149p1@Gm949
2.88e-25FFCP PHASE2:Mm9::chr18:47081451..47081490,+#_584b7b2941e8497e6672fb8f9f2bd149p1@Gm949
3.18e-25FFCP PHASE2:Mm9::chr2:104966510..104966538,-#_c5fb9a28cc9cc09aaa0ecdf6cda03e2cp2@ENSMUST00000174870
3.18e-25FFCP PHASE1:Mm9::chr2:104966510..104966538,-#_c5fb9a28cc9cc09aaa0ecdf6cda03e2cp2@ENSMUST00000174870
4.95e-25FFCP PHASE2:Mm9::chr7:20074394..20074416,+#_cef83494cda4cc3d4e1fdf8b68e08f1ap1@Exoc3l2
4.95e-25FFCP PHASE1:Mm9::chr7:20074394..20074416,+#_cef83494cda4cc3d4e1fdf8b68e08f1ap1@Exoc3l2
5.63e-25FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_8fc02e40ff6480435410fab497f0df92p1@Tuba3a, p2@Tuba3b
5.63e-25FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_8fc02e40ff6480435410fab497f0df92p1@Tuba3b
5.63e-25FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_8fc02e40ff6480435410fab497f0df92p1@Tuba3a, p2@Tuba3b
5.63e-25FFCP PHASE1:Mm9::chr1:36739960..36739999,-#_8fc02e40ff6480435410fab497f0df92p1@Fam178b

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003886&oldid=1835922"