Personal tools

UBERON:0004801: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0000002
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:cervix epithelium
Definition:"An epithelium that is part of a uterine cervix [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000241
EFO:0001913
MA:0001724

ncithesaurus:Cervix_Epithelium
Synonyms: "cervical canal epithelial tissue" EXACT [OBOL:automatic]
"cervical canal epithelium" EXACT [OBOL:automatic]
"cervical canal of uterus epithelial tissue" EXACT [OBOL:automatic]
"cervical canal of uterus epithelium" EXACT [OBOL:automatic]
"cervix epithelial tissue" EXACT [OBOL:automatic]
"cervix of uterus epithelial tissue" EXACT [OBOL:automatic]
"cervix of uterus epithelium" EXACT [OBOL:automatic]
"epithelial tissue of cervical canal" EXACT [OBOL:automatic]
"epithelial tissue of cervical canal of uterus" EXACT [OBOL:automatic]
"epithelial tissue of cervix" EXACT [OBOL:automatic]
"epithelial tissue of cervix of uterus" EXACT [OBOL:automatic]
"epithelial tissue of neck of uterus" EXACT [OBOL:automatic]
"epithelial tissue of uterine cervix" EXACT [OBOL:automatic]
"epithelium of cervical canal" EXACT [OBOL:automatic]
"epithelium of cervical canal of uterus" EXACT [OBOL:automatic]
"epithelium of cervix" EXACT [OBOL:automatic]
"epithelium of cervix of uterus" EXACT [OBOL:automatic]
"epithelium of neck of uterus" EXACT [OBOL:automatic]
"epithelium of uterine cervix" EXACT [OBOL:automatic]
"neck of uterus epithelial tissue" EXACT [OBOL:automatic]
"neck of uterus epithelium" EXACT [OBOL:automatic]
"uterine cervix epithelial tissue" EXACT [OBOL:automatic]
"uterine cervix epithelium" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006955(uterine epithelium)



Children

part of:CL:0002535 (epithelial cell of cervix)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
  • 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004801 (cervix epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE2:Hg19::chr14:104394868..104394874,+#_93b17967eacae1cc6785d71e40094cd7p5@TDRD9
8.99e-131FFCP PHASE1:Hg19::chr14:104394868..104394874,+#_93b17967eacae1cc6785d71e40094cd7p5@TDRD9
5.68e-99FFCP PHASE2:Hg19::chr17:34838949..34838959,-#_5fa370250540046f9327a78e6754656fp@chr17:34838949..34838959, -
5.68e-99FFCP PHASE1:Hg19::chr17:34838949..34838959,-#_5fa370250540046f9327a78e6754656fp@chr17:34838949..34838959, -
1.55e-98FFCP PHASE2:Hg19::chr2:9059377..9059382,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr2:9059377..9059382, -
1.55e-98FFCP PHASE1:Hg19::chr7:127260123..127260165,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr7:127260123..127260165, +
1.55e-98FFCP PHASE1:Hg19::chr3:55205086..55205090,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr3:55205086..55205090, -
1.55e-98FFCP PHASE1:Hg19::chr20:21918384..21918387,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918384..21918387, +
1.55e-98FFCP PHASE1:Hg19::chr6:39290815..39290820,-#_7d6581d5c9abf1b87c461a711f9f20aap6@KCNK16
1.55e-98FFCP PHASE2:Hg19::chr6:49467678..49467693,+#_7d6581d5c9abf1b87c461a711f9f20aap2@GLYATL3
1.55e-98FFCP PHASE2:Hg19::chr17:26911596..26911605,-#_7d6581d5c9abf1b87c461a711f9f20aap8@SPAG5
1.55e-98FFCP PHASE2:Hg19::chr9:91077381..91077392,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr9:91077381..91077392, +
1.55e-98FFCP PHASE2:Hg19::chr8:41485217..41485222,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41485217..41485222, -
1.55e-98FFCP PHASE2:Hg19::chr7:127258190..127258201,-#_7d6581d5c9abf1b87c461a711f9f20aap2@PAX4
1.55e-98FFCP PHASE2:Hg19::chr18:74350663..74350688,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr18:74350663..74350688, -
1.55e-98FFCP PHASE1:Hg19::chr8:121054330..121054333,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121054330..121054333, -
1.55e-98FFCP PHASE2:Hg19::chr5:170105957..170105992,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr5:170105957..170105992, -
1.55e-98FFCP PHASE1:Hg19::chr19:7184803..7184814,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:7184803..7184814, -
1.55e-98FFCP PHASE2:Hg19::chr17:27892902..27892907,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:27892902..27892907, +
1.55e-98FFCP PHASE1:Hg19::chr8:41508303..41508308,-#_7d6581d5c9abf1b87c461a711f9f20aap2@NKX6-3
1.55e-98FFCP PHASE1:Hg19::chr12:14849414..14849417,-#_7d6581d5c9abf1b87c461a711f9f20aap8@GUCY2C
1.55e-98FFCP PHASE2:Hg19::chr22:32555214..32555221,-#_7d6581d5c9abf1b87c461a711f9f20aap2@C22orf42
1.55e-98FFCP PHASE2:Hg19::chr19:7184762..7184771,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:7184762..7184771, -
1.55e-98FFCP PHASE2:Hg19::chr2:182548451..182548457,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr2:182548451..182548457, -
1.55e-98FFCP PHASE1:Hg19::chr8:41508626..41508633,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41508626..41508633, +
1.55e-98FFCP PHASE2:Hg19::chr8:121056549..121056554,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121056549..121056554, -
1.55e-98FFCP PHASE2:Hg19::chr7:150871938..150871949,-#_7d6581d5c9abf1b87c461a711f9f20aap3@GBX1
1.55e-98FFCP PHASE2:Hg19::chr14:23465559..23465575,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr14:23465559..23465575, -
1.55e-98FFCP PHASE2:Hg19::chr12:131117194..131117202,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr12:131117194..131117202, -
1.55e-98FFCP PHASE1:Hg19::chr8:121062548..121062551,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121062548..121062551, -
1.55e-98FFCP PHASE2:Hg19::chr20:21918470..21918480,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918470..21918480, +
1.55e-98FFCP PHASE2:Hg19::chr11:2439293..2439304,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2439293..2439304, -
1.55e-98FFCP PHASE2:Hg19::chr8:41485005..41485017,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41485005..41485017, -
1.55e-98FFCP PHASE1:Hg19::chr6:49467630..49467640,+#_7d6581d5c9abf1b87c461a711f9f20aap3@GLYATL3
1.55e-98FFCP PHASE1:Hg19::chr8:41485173..41485181,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41485173..41485181, -
1.55e-98FFCP PHASE2:Hg19::chr11:79742692..79742706,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:79742692..79742706, +
1.55e-98FFCP PHASE1:Hg19::chr12:131117147..131117158,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr12:131117147..131117158, -
1.55e-98FFCP PHASE1:Hg19::chr19:16838056..16838070,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:16838056..16838070, +
1.55e-98FFCP PHASE1:Hg19::chr11:2436541..2436561,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2436541..2436561, -
1.55e-98FFCP PHASE2:Hg19::chr2:182546258..182546267,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr2:182546258..182546267, +
1.55e-98FFCP PHASE2:Hg19::chr21:47588743..47588750,-#_7d6581d5c9abf1b87c461a711f9f20aap9@C21orf56
1.55e-98FFCP PHASE1:Hg19::chr6:20705180..20705181,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr6:20705180..20705181, +
1.55e-98FFCP PHASE2:Hg19::chr1:207193762..207193766,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr1:207193762..207193766, +
1.55e-98FFCP PHASE2:Hg19::chr12:14849447..14849450,-#_7d6581d5c9abf1b87c461a711f9f20aap7@GUCY2C
1.55e-98FFCP PHASE1:Hg19::chr20:21918392..21918404,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918392..21918404, +
1.55e-98FFCP PHASE2:Hg19::chr6:49467718..49467724,+#_7d6581d5c9abf1b87c461a711f9f20aap4@GLYATL3
1.55e-98FFCP PHASE2:Hg19::chr8:41486855..41486866,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41486855..41486866, -
1.55e-98FFCP PHASE2:Hg19::chr7:127260123..127260165,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr7:127260123..127260165, +
1.55e-98FFCP PHASE1:Hg19::chr8:121056304..121056311,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121056304..121056311, -
1.55e-98FFCP PHASE2:Hg19::chr20:21918384..21918387,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918384..21918387, +
1.55e-98FFCP PHASE2:Hg19::chr11:2436019..2436030,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2436019..2436030, -
1.55e-98FFCP PHASE1:Hg19::chr19:7184828..7184838,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:7184828..7184838, -
1.55e-98FFCP PHASE2:Hg19::chr17:27892922..27892925,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:27892922..27892925, +
1.55e-98FFCP PHASE1:Hg19::chr6:129597668..129597672,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr6:129597668..129597672, +
1.55e-98FFCP PHASE2:Hg19::chr6:25661559..25661563,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr6:25661559..25661563, +
1.55e-98FFCP PHASE2:Hg19::chr19:7184803..7184814,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:7184803..7184814, -
1.55e-98FFCP PHASE1:Hg19::chr9:35237460..35237466,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr9:35237460..35237466, +
1.55e-98FFCP PHASE1:Hg19::chr8:33464773..33464782,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:33464773..33464782, +
1.55e-98FFCP PHASE1:Hg19::chr4:22737597..22737604,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr4:22737597..22737604, +
1.55e-98FFCP PHASE2:Hg19::chr8:121058540..121058543,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121058540..121058543, -
1.55e-98FFCP PHASE2:Hg19::chr17:79225428..79225433,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:79225428..79225433, -
1.55e-98FFCP PHASE1:Hg19::chr17:26911586..26911592,-#_7d6581d5c9abf1b87c461a711f9f20aap9@SPAG5
1.55e-98FFCP PHASE2:Hg19::chr8:41508626..41508633,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41508626..41508633, +
1.55e-98FFCP PHASE1:Hg19::chr7:127258120..127258138,-#_7d6581d5c9abf1b87c461a711f9f20aap3@PAX4
1.55e-98FFCP PHASE1:Hg19::chr8:121066549..121066554,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121066549..121066554, -
1.55e-98FFCP PHASE1:Hg19::chr3:4810204..4810210,+#_7d6581d5c9abf1b87c461a711f9f20aap34@ITPR1
1.55e-98FFCP PHASE2:Hg19::chr6:49467576..49467583,+#_7d6581d5c9abf1b87c461a711f9f20aap5@GLYATL3
1.55e-98FFCP PHASE2:Hg19::chr8:41485037..41485047,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41485037..41485047, -
1.55e-98FFCP PHASE2:Hg19::chr17:32314322..32314327,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:32314322..32314327, -
1.55e-98FFCP PHASE1:Hg19::chr20:20392704..20392711,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:20392704..20392711, -
1.55e-98FFCP PHASE1:Hg19::chr22:44377129..44377137,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr22:44377129..44377137, +
1.55e-98FFCP PHASE1:Hg19::chr6:49467646..49467657,+#_7d6581d5c9abf1b87c461a711f9f20aap1@GLYATL3
1.55e-98FFCP PHASE1:Hg19::chr8:41485201..41485208,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41485201..41485208, -
1.55e-98FFCP PHASE1:Hg19::chr1:70826186..70826193,-#_7d6581d5c9abf1b87c461a711f9f20aap4@ENST00000413943
1.55e-98FFCP PHASE1:Hg19::chr14:23465559..23465575,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr14:23465559..23465575, -
1.55e-98FFCP PHASE1:Hg19::chr12:131117194..131117202,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr12:131117194..131117202, -
1.55e-98FFCP PHASE1:Hg19::chr11:2439293..2439304,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2439293..2439304, -
1.55e-98FFCP PHASE2:Hg19::chr3:55205086..55205090,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr3:55205086..55205090, -
1.55e-98FFCP PHASE2:Hg19::chr6:39290815..39290820,-#_7d6581d5c9abf1b87c461a711f9f20aap6@KCNK16
1.55e-98FFCP PHASE1:Hg19::chr17:27892902..27892907,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:27892902..27892907, +
1.55e-98FFCP PHASE2:Hg19::chr8:121054330..121054333,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121054330..121054333, -
1.55e-98FFCP PHASE2:Hg19::chr19:16838056..16838070,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:16838056..16838070, +
1.55e-98FFCP PHASE1:Hg19::chr20:21918433..21918444,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918433..21918444, +
1.55e-98FFCP PHASE1:Hg19::chr2:182548440..182548448,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr2:182548440..182548448, -
1.55e-98FFCP PHASE1:Hg19::chr11:79742692..79742706,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:79742692..79742706, +
1.55e-98FFCP PHASE2:Hg19::chr8:41508303..41508308,-#_7d6581d5c9abf1b87c461a711f9f20aap2@NKX6-3
1.55e-98FFCP PHASE2:Hg19::chr12:131117116..131117123,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr12:131117116..131117123, -
1.55e-98FFCP PHASE1:Hg19::chr8:121056349..121056360,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121056349..121056360, -
1.55e-98FFCP PHASE2:Hg19::chr20:21918392..21918404,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:21918392..21918404, +
1.55e-98FFCP PHASE2:Hg19::chr11:2436040..2436051,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2436040..2436051, -
1.55e-98FFCP PHASE2:Hg19::chr17:27892945..27892952,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr17:27892945..27892952, +
1.55e-98FFCP PHASE1:Hg19::chr5:40984132..40984133,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr5:40984132..40984133, +
1.55e-98FFCP PHASE1:Hg19::chr20:43726566..43726571,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr20:43726566..43726571, +
1.55e-98FFCP PHASE1:Hg19::chr2:9059355..9059366,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr2:9059355..9059366, -
1.55e-98FFCP PHASE2:Hg19::chr19:7184828..7184838,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr19:7184828..7184838, -
1.55e-98FFCP PHASE1:Hg19::chr9:35237473..35237478,+#_7d6581d5c9abf1b87c461a711f9f20aap@chr9:35237473..35237478, +
1.55e-98FFCP PHASE1:Hg19::chr8:41484957..41484961,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:41484957..41484961, -
1.55e-98FFCP PHASE1:Hg19::chr11:2436019..2436030,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr11:2436019..2436030, -
1.55e-98FFCP PHASE2:Hg19::chr8:121062548..121062551,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:121062548..121062551, -
1.55e-98FFCP PHASE1:Hg19::chr8:22001308..22001310,-#_7d6581d5c9abf1b87c461a711f9f20aap@chr8:22001308..22001310, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004801&oldid=1836033"