Personal tools

UBERON:0005729: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 4: Line 4:
|namespace=
|namespace=
|def=
|def=
|xref=ZFA:0001453
|xref=TAO:0001453;;ZFA:0001453
|is_a=UBERON:0005732
|is_a=UBERON:0005732
|synonym="pectoral fin field" NARROW SENSU [ZFA:0001453]
|synonym="pectoral fin field" NARROW SENSU [ZFA:0001453]
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
Line 20: Line 19:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Embryonic region that develops into the pectoral fin bud.[TAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Latest revision as of 17:06, 26 June 2012

Name:forelimb/pectoral fin field
Xrefs:
links:

TAO:0001453

ZFA:0001453
Synonyms: "pectoral fin field" NARROW SENSU [ZFA:0001453]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005732(limb/fin field)



Children

develops from:UBERON:0005419 (pectoral appendage bud)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005729 (forelimb/pectoral fin field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Embryonic region that develops into the pectoral fin bud.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.