CL:0000211: Difference between revisions
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|def="A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma] | |def="A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma] | ||
|xref= | |xref= | ||
|is_a=CL: | |is_a=CL:0000003 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:24, 26 June 2012
| Name: | electrically active cell |
|---|---|
| Namespace: | cell |
| Definition: | "A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000003(native cell) |
|---|
Children
| is a: | CL:0000393 (electrically responsive cell),CL:0000404 (electrically signaling cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000211 (electrically active cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.68e-59 | FFCP PHASE1:Mm9::chr8:125944624..125944663,+#_bf019b343d6b1268795e7458dcb080b5 | p@chr8:125944624..125944663, + |
| 7.68e-59 | FFCP PHASE2:Mm9::chr8:125944624..125944663,+#_bf019b343d6b1268795e7458dcb080b5 | p@chr8:125944624..125944663, + |
| 2.59e-51 | FFCP PHASE1:Mm9::chr7:109167666..109167667,+#_ce3d873510f21ddb531e9ff3940dc411 | p@chr7:109167666..109167667, + |
| 2.59e-51 | FFCP PHASE2:Mm9::chr7:109167666..109167667,+#_ce3d873510f21ddb531e9ff3940dc411 | p@chr7:109167666..109167667, + |
| 1.25e-48 | FFCP PHASE2:Mm9::chr9:107659863..107659866,-#_e815d26d0202ae8f01bf16197ebf5493 | p@chr9:107659863..107659866, - |
| 1.25e-48 | FFCP PHASE1:Mm9::chr9:107659863..107659866,-#_e815d26d0202ae8f01bf16197ebf5493 | p@chr9:107659863..107659866, - |
| 4.57e-48 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_53533fdc54bbf961979db8b324613d73 | p@chr6:53359400..53359406, + |
| 4.57e-48 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_53533fdc54bbf961979db8b324613d73 | p@chr6:53359400..53359406, + |
| 3.21e-47 | FFCP PHASE1:Mm9::chr11:99071307..99071313,-#_c425f635a64f86737b8957c8c02ca7cc | p@chr11:99071307..99071313, - |
| 3.21e-47 | FFCP PHASE2:Mm9::chr11:99071307..99071313,-#_c425f635a64f86737b8957c8c02ca7cc | p@chr11:99071307..99071313, - |
| 6.42e-46 | FFCP PHASE2:Mm9::chr3:55849731..55849735,-#_60ef7cf52f8d9f6de98a06c8793f736b | p@chr3:55849731..55849735, - |
| 6.42e-46 | FFCP PHASE1:Mm9::chr3:55849731..55849735,-#_60ef7cf52f8d9f6de98a06c8793f736b | p@chr3:55849731..55849735, - |
| 8.26e-46 | FFCP PHASE1:Mm9::chr14:26427427..26427439,+#_7ee1b67c36fc332d58be8a42e8af139e | p22@Zmiz1 |
| 8.26e-46 | FFCP PHASE2:Mm9::chr14:26427427..26427439,+#_7ee1b67c36fc332d58be8a42e8af139e | p22@Zmiz1 |
| 2.04e-45 | FFCP PHASE1:Mm9::chr13:9279895..9279899,+#_8f00d19dca235f5842fe78a7b0a57896 | p@chr13:9279895..9279899, + |
| 2.04e-45 | FFCP PHASE2:Mm9::chr13:9279895..9279899,+#_8f00d19dca235f5842fe78a7b0a57896 | p@chr13:9279895..9279899, + |
| 2.16e-44 | FFCP PHASE1:Mm9::chr18:43504798..43504810,-#_337fb34286d2d8469f481c43b2f8a47a | p@chr18:43504798..43504810, - |
| 2.16e-44 | FFCP PHASE2:Mm9::chr18:43504798..43504810,-#_337fb34286d2d8469f481c43b2f8a47a | p@chr18:43504798..43504810, - |
| 7.54e-44 | FFCP PHASE1:Mm9::chr2:87366179..87366201,+#_9e3e8593b7105277b3600eb5e53318f2 | p1@ENSMUST00000167296 |
| 7.54e-44 | FFCP PHASE2:Mm9::chr2:87366179..87366201,+#_9e3e8593b7105277b3600eb5e53318f2 | p1@ENSMUST00000167296 |
| 7.6e-43 | FFCP PHASE2:Mm9::chr16:73045578..73045594,+#_47f8b1490b632f61827929d79f1da45a | p@chr16:73045578..73045594, + |
| 7.6e-43 | FFCP PHASE1:Mm9::chr16:73045578..73045594,+#_47f8b1490b632f61827929d79f1da45a | p@chr16:73045578..73045594, + |
| 2.67e-42 | FFCP PHASE1:Mm9::chr7:111031610..111031645,-#_9a5c9ea0fb3370178fd84070336b9aa0 | p1@ENSMUST00000120890 |
| 2.67e-42 | FFCP PHASE2:Mm9::chr7:111031610..111031645,-#_9a5c9ea0fb3370178fd84070336b9aa0 | p1@ENSMUST00000120890 |
| 3.4e-42 | FFCP PHASE1:Mm9::chr8:125944694..125944740,+#_bf4fd868243a7d29339e3401e2a8a5d2 | p@chr8:125944694..125944740, + |
| 3.4e-42 | FFCP PHASE2:Mm9::chr8:125944694..125944740,+#_bf4fd868243a7d29339e3401e2a8a5d2 | p@chr8:125944694..125944740, + |
| 9.71e-42 | FFCP PHASE2:Mm9::chr3:28664288..28664311,-#_8cbbad027263a43966cfa0684dc79112 | p1@LOC100505213 |
| 9.71e-42 | FFCP PHASE1:Mm9::chr3:28664288..28664311,-#_8cbbad027263a43966cfa0684dc79112 | p1@LOC100505213 |
| 4.89e-41 | FFCP PHASE1:Mm9::chr14:40284476..40284479,-#_207cfd1ec857f680650b9bd50d6f1eae | p@chr14:40284476..40284479, - |
| 4.89e-41 | FFCP PHASE2:Mm9::chr14:40284476..40284479,-#_207cfd1ec857f680650b9bd50d6f1eae | p@chr14:40284476..40284479, - |
| 9.42e-41 | FFCP PHASE1:Mm9::chr7:38554684..38554696,-#_105a9a94089fb374676f711b20e90db7 | p10@Zfp536 |
| 9.42e-41 | FFCP PHASE2:Mm9::chr7:38554684..38554696,-#_105a9a94089fb374676f711b20e90db7 | p10@Zfp536 |
| 4.15e-40 | FFCP PHASE1:Mm9::chr6:118147812..118147826,-#_c27c9a55c4df1cbeca385d32f5896547 | p4@Ret |
| 4.15e-40 | FFCP PHASE2:Mm9::chr6:118147812..118147826,-#_c27c9a55c4df1cbeca385d32f5896547 | p4@Ret |
| 4.09e-39 | FFCP PHASE1:Mm9::chr9:75414533..75414538,-#_5e002ccef37f639df67922dab9bd1445 | p@chr9:75414533..75414538, - |
| 4.09e-39 | FFCP PHASE2:Mm9::chr9:75414533..75414538,-#_5e002ccef37f639df67922dab9bd1445 | p@chr9:75414533..75414538, - |
| 4.27e-39 | FFCP PHASE2:Mm9::chr13:9277420..9277424,+#_c42c23688555d424c66211cf7a964e4a | p@chr13:9277420..9277424, + |
| 4.27e-39 | FFCP PHASE1:Mm9::chr13:9277420..9277424,+#_c42c23688555d424c66211cf7a964e4a | p@chr13:9277420..9277424, + |
| 6.79e-39 | FFCP PHASE2:Mm9::chr1:24619955..24619958,-#_10993d3a079d26c5f4fd60acffe16934 | p1@ENSMUST00000088336 |
| 6.79e-39 | FFCP PHASE1:Mm9::chr1:24619955..24619958,-#_10993d3a079d26c5f4fd60acffe16934 | p1@ENSMUST00000088336 |
| 5.18e-38 | FFCP PHASE2:Mm9::chr2:30663055..30663094,-#_c494d1ca3175e4c40bf98c52c4783df2 | p@chr2:30663055..30663094, - |
| 5.18e-38 | FFCP PHASE1:Mm9::chr2:30663055..30663094,-#_c494d1ca3175e4c40bf98c52c4783df2 | p@chr2:30663055..30663094, - |
| 2.92e-37 | FFCP PHASE1:Mm9::chr1:170361398..170361400,-#_2001674b1242fe102aa31a82a4099baf | p@chr1:170361398..170361400, - |
| 2.92e-37 | FFCP PHASE2:Mm9::chr1:170361398..170361400,-#_2001674b1242fe102aa31a82a4099baf | p@chr1:170361398..170361400, - |
| 4.85e-37 | FFCP PHASE1:Mm9::chr6:7933424..7933445,-#_481d7e264b9ba6a6adbad1b4411de3cd | p1@ENSMUST00000057757 |
| 4.85e-37 | FFCP PHASE2:Mm9::chr6:7933424..7933445,-#_481d7e264b9ba6a6adbad1b4411de3cd | p1@ENSMUST00000057757 |
| 5.38e-37 | FFCP PHASE1:Mm9::chr13:76079742..76079746,-#_55afe167464d5f8d8b39ffff41e9a253 | p@chr13:76079742..76079746, - |
| 5.38e-37 | FFCP PHASE2:Mm9::chr13:76079742..76079746,-#_55afe167464d5f8d8b39ffff41e9a253 | p@chr13:76079742..76079746, - |
| 1.05e-35 | FFCP PHASE1:Mm9::chr5:38550223..38550234,-#_a0e44e449782c9fd34cd99ef46e984e3 | p@chr5:38550223..38550234, - |
| 1.05e-35 | FFCP PHASE2:Mm9::chr5:38550223..38550234,-#_a0e44e449782c9fd34cd99ef46e984e3 | p@chr5:38550223..38550234, - |
| 1.19e-35 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_0779d3461e74432a0cee453bcf89083b | p@chr11:102661517..102661541, - |
| 1.19e-35 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_0779d3461e74432a0cee453bcf89083b | p@chr11:102661517..102661541, - |
| 3.1e-35 | FFCP PHASE2:Mm9::chr9:57389282..57389286,+#_13a117fcfb4b544956cad7187ccbe41a | p@chr9:57389282..57389286, + |
| 3.1e-35 | FFCP PHASE1:Mm9::chr9:57389282..57389286,+#_13a117fcfb4b544956cad7187ccbe41a | p@chr9:57389282..57389286, + |
| 3.77e-35 | FFCP PHASE2:Mm9::chr17:6106475..6106488,-#_55542b972bbc8d9ed904519a59f34354 | p@chr17:6106475..6106488, - |
| 3.77e-35 | FFCP PHASE1:Mm9::chr17:6106475..6106488,-#_55542b972bbc8d9ed904519a59f34354 | p@chr17:6106475..6106488, - |
| 3.99e-35 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_91f478e28261451c209cebc7384bc022 | p@chr4:74703497..74703511, + |
| 3.99e-35 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_91f478e28261451c209cebc7384bc022 | p@chr4:74703497..74703511, + |
| 7.17e-35 | FFCP PHASE1:Mm9::chr18:43481915..43481945,-#_5333a7e3802c13c56657b37b7c9a5971 | p2@uc008euf.1 |
| 7.17e-35 | FFCP PHASE2:Mm9::chr18:43481915..43481945,-#_5333a7e3802c13c56657b37b7c9a5971 | p2@uc008euf.1 |
| 7.88e-35 | FFCP PHASE2:Mm9::chr13:99383382..99383414,+#_732047249bfcb81bebc44de312b51be3 | p@chr13:99383382..99383414, + |
| 7.88e-35 | FFCP PHASE1:Mm9::chr13:99383382..99383414,+#_732047249bfcb81bebc44de312b51be3 | p@chr13:99383382..99383414, + |
| 8.35e-35 | FFCP PHASE2:Mm9::chr6:118147365..118147366,-#_f40854ee1e7ffc1a63e503a5b5f707b5 | p5@Ret |
| 8.35e-35 | FFCP PHASE1:Mm9::chr6:118147365..118147366,-#_f40854ee1e7ffc1a63e503a5b5f707b5 | p5@Ret |
| 1.22e-34 | FFCP PHASE1:Mm9::chr12:28025392..28025407,-#_4c47bb5ac9d2ee411cdc9d4f6874b8e9 | p@chr12:28025392..28025407, - |
| 1.22e-34 | FFCP PHASE2:Mm9::chr12:28025392..28025407,-#_4c47bb5ac9d2ee411cdc9d4f6874b8e9 | p@chr12:28025392..28025407, - |
| 1.26e-34 | FFCP PHASE1:Mm9::chr12:55340225..55340232,+#_4e2cd5ab8bff942b69280cb26ef03fcf | p1@ENSMUST00000082671 |
| 1.26e-34 | FFCP PHASE2:Mm9::chr12:55340225..55340232,+#_4e2cd5ab8bff942b69280cb26ef03fcf | p1@ENSMUST00000082671 |
| 1.27e-34 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_e86702a08e1b8542f93def6566fb83a1 | p@chr4:7846444..7846449, - |
| 1.27e-34 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_e86702a08e1b8542f93def6566fb83a1 | p@chr4:7846444..7846449, - |
| 1.32e-34 | FFCP PHASE1:Mm9::chr17:6106489..6106539,-#_089c1e8912eed0102190359a3c674f98 | p@chr17:6106489..6106539, - |
| 1.32e-34 | FFCP PHASE2:Mm9::chr17:6106489..6106539,-#_089c1e8912eed0102190359a3c674f98 | p@chr17:6106489..6106539, - |
| 1.35e-34 | FFCP PHASE1:Mm9::chr13:100191678..100191695,-#_9dec1519464691d959ff2aaf92cc441c | p@chr13:100191678..100191695, - |
| 1.35e-34 | FFCP PHASE2:Mm9::chr13:100191678..100191695,-#_9dec1519464691d959ff2aaf92cc441c | p@chr13:100191678..100191695, - |
| 1.95e-34 | FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_09394b561711fdffa00e00ba247f61a5 | p3@CXCL6 |
| 1.95e-34 | FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_09394b561711fdffa00e00ba247f61a5 | p3@CXCL6 |
| 2.1e-34 | FFCP PHASE1:Mm9::chr12:52941704..52941726,-#_ac459c0dd1b02ac2ecb02a09df8d2486 | p@chr12:52941704..52941726, - |
| 2.1e-34 | FFCP PHASE2:Mm9::chr12:52941704..52941726,-#_ac459c0dd1b02ac2ecb02a09df8d2486 | p@chr12:52941704..52941726, - |
| 6.31e-34 | FFCP PHASE1:Mm9::chr6:146526110..146526114,-#_0f9b9239c4d7304e2d4ea8877ed9cfed | p6@4933424B01Rik |
| 6.31e-34 | FFCP PHASE2:Mm9::chr6:146526110..146526114,-#_0f9b9239c4d7304e2d4ea8877ed9cfed | p6@4933424B01Rik |
| 1.4e-33 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_6227758d0d8275fb089212ac82de5f8f | p2@LRRC17 |
| 1.4e-33 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_6227758d0d8275fb089212ac82de5f8f | p2@LRRC17 |
| 1.91e-33 | FFCP PHASE1:Mm9::chr9:49312416..49312430,-#_09ea1c46e7b7f39b8e0aa2c992bbdd0c | p@chr9:49312416..49312430, - |
| 1.91e-33 | FFCP PHASE2:Mm9::chr9:49312416..49312430,-#_09ea1c46e7b7f39b8e0aa2c992bbdd0c | p@chr9:49312416..49312430, - |
| 2.11e-33 | FFCP PHASE1:Mm9::chr10:57504783..57504796,+#_9e19ec54607b5c4c1cb0604f860de324 | p4@Fabp7 |
| 2.11e-33 | FFCP PHASE2:Mm9::chr10:57504783..57504796,+#_9e19ec54607b5c4c1cb0604f860de324 | p4@Fabp7 |
| 4.29e-33 | FFCP PHASE2:Mm9::chr8:125941995..125942014,+#_47103df60ff80a1a71562125bd0efcf0 | p@chr8:125941995..125942014, + |
| 4.29e-33 | FFCP PHASE1:Mm9::chr8:125941995..125942014,+#_47103df60ff80a1a71562125bd0efcf0 | p@chr8:125941995..125942014, + |
| 4.7e-33 | FFCP PHASE1:Mm9::chr18:43514435..43514457,-#_d7796ad826625762bf970c3cb427a24d | p@chr18:43514435..43514457, - |
| 4.7e-33 | FFCP PHASE2:Mm9::chr18:43514435..43514457,-#_d7796ad826625762bf970c3cb427a24d | p@chr18:43514435..43514457, - |
| 4.83e-33 | FFCP PHASE1:Mm9::chr11:104189552..104189556,-#_7c8dc567ac4199ea4fd7cf65933382d4 | p@chr11:104189552..104189556, - |
| 4.83e-33 | FFCP PHASE2:Mm9::chr11:104189552..104189556,-#_7c8dc567ac4199ea4fd7cf65933382d4 | p@chr11:104189552..104189556, - |
| 5.77e-33 | FFCP PHASE2:Hg19::chr4:169059590..169059615,+#_b604b00079ae4d4dbc842a0334170b8f | p@chr4:169059590..169059615, + |
| 5.77e-33 | FFCP PHASE1:Hg19::chr4:169059590..169059615,+#_b604b00079ae4d4dbc842a0334170b8f | p@chr4:169059590..169059615, + |
| 6.16e-33 | FFCP PHASE2:Mm9::chr6:134489536..134489540,-#_495348cf142e4d5abacba0217bd557ad | p@chr6:134489536..134489540, - |
| 6.16e-33 | FFCP PHASE1:Mm9::chr6:134489536..134489540,-#_495348cf142e4d5abacba0217bd557ad | p@chr6:134489536..134489540, - |
| 6.37e-33 | FFCP PHASE2:Mm9::chr1:38851929..38851932,-#_695af39dced8c472b18976d4389e92b1 | p@chr1:38851929..38851932, - |
| 6.37e-33 | FFCP PHASE1:Mm9::chr1:38851929..38851932,-#_695af39dced8c472b18976d4389e92b1 | p@chr1:38851929..38851932, - |
| 1.01e-32 | FFCP PHASE2:Mm9::chr8:87230210..87230227,-#_429ce225f3ca1c4613ccb7d59cce8366 | p@chr8:87230210..87230227, - |
| 1.01e-32 | FFCP PHASE1:Mm9::chr8:87230210..87230227,-#_429ce225f3ca1c4613ccb7d59cce8366 | p@chr8:87230210..87230227, - |
