CL:0002327: Difference between revisions
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|subset= | |subset= | ||
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|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 17:27, 26 June 2012
| Name: | mammary epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "An epithelial cell of the mammary gland." [GOC:tfm, PMID:19022771] | ||
| Xrefs: |
| ||
| Synonyms: | "breast epithelial cell" EXACT [] | ||
| Created by: | tmeehan | ||
| Creation date: | 2010-09-20T01:49:37Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|
Children
| derives from: | FF:0000088 (human mammary epithelial cell sample),FF:0101908 (MDA-MB-453 cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 11273-116H4 (Mammary Epithelial Cell, donor1)
- 11350-117G9 (Mammary Epithelial Cell, donor2)
- 11422-118F9 (Mammary Epithelial Cell, donor3)
Mouse (Mus musculus)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 11273-116H4 (Mammary Epithelial Cell, donor1)
- 11350-117G9 (Mammary Epithelial Cell, donor2)
- 11422-118F9 (Mammary Epithelial Cell, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002327 (mammary epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.72e-89 | FFCP PHASE2:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59b | p4@WDR66 |
| 5.72e-89 | FFCP PHASE1:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59b | p4@WDR66 |
| 2.57e-88 | FFCP PHASE2:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2c | p4@CASP14 |
| 2.57e-88 | FFCP PHASE1:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2c | p4@CASP14 |
| 2.4e-66 | FFCP PHASE2:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81a | p@chr3:101772894..101772897, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81a | p@chr3:101772894..101772897, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12 | p5@ALOXE3 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12 | p5@ALOXE3 |
| 4.67e-66 | FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083 | p@chr20:49047228..49047236, - |
| 4.67e-66 | FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083 | p@chr20:49047228..49047236, - |
| 9.51e-64 | FFCP PHASE2:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323 | p@chr3:114168260..114168264, + |
| 9.51e-64 | FFCP PHASE1:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323 | p@chr3:114168260..114168264, + |
| 1.46e-63 | FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073af | p@chr2:69026957..69026966, + |
| 1.46e-63 | FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073af | p@chr2:69026957..69026966, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:50785214..50785224,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr6:50785214..50785224, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:53559600..53559623,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:53559600..53559623, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:65990392..65990397,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:65990392..65990397, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:190447673..190447683, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:37451725..37451728, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:10141294..10141304,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr6:10141294..10141304, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319 | p14@GPR160 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:149863976..149863986,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr2:149863976..149863986, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:153603570..153603573,-#_eedbea526b0293360d2cd21efb3e3319 | p@chrX:153603570..153603573, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:829495..829500,+#_eedbea526b0293360d2cd21efb3e3319 | p23@EFCAB4A |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:37555579..37555584,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:37555579..37555584, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:93806120..93806155,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr12:93806120..93806155, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:42429365..42429366,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:42429365..42429366, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:4722283..4722286,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr3:4722283..4722286, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319 | p9@GSR |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:47366146..47366153,-#_eedbea526b0293360d2cd21efb3e3319 | p1@CYP4Z2P |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:30584507..30584514,-#_eedbea526b0293360d2cd21efb3e3319 | p13@GSR |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:169756638..169756645,+#_eedbea526b0293360d2cd21efb3e3319 | p15@GPR160 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319 | p1@VN1R53P |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319 | p2@ENST00000559477 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:11455900..11455910,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr19:11455900..11455910, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:94080175..94080205,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:94080175..94080205, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:43540892..43540907,+#_eedbea526b0293360d2cd21efb3e3319 | p4@UMODL1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:37451725..37451728, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:176518002..176518011,+#_eedbea526b0293360d2cd21efb3e3319 | p19@FGFR4 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:160605585..160605628,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr4:160605585..160605628, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:131871491..131871519,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr9:131871491..131871519, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:50785279..50785289,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr6:50785279..50785289, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:31781321..31781329,+#_eedbea526b0293360d2cd21efb3e3319 | p2@BPIFA4P |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:249152282..249152291,-#_eedbea526b0293360d2cd21efb3e3319 | p21@ZNF692 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:94277045..94277057,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:94277045..94277057, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:61514114..61514119,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:61514114..61514119, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:828104..828109,+#_eedbea526b0293360d2cd21efb3e3319 | p32@EFCAB4A |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319 | p1@VN1R53P |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:117379097..117379106,+#_eedbea526b0293360d2cd21efb3e3319 | p3@AB528759 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:48281411..48281419,-#_eedbea526b0293360d2cd21efb3e3319 | p5@ABCC11 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:42429373..42429374,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:42429373..42429374, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:30584524..30584529,-#_eedbea526b0293360d2cd21efb3e3319 | p14@GSR |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:148231243..148231244,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr5:148231243..148231244, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319 | p14@GPR160 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:47366146..47366153,-#_eedbea526b0293360d2cd21efb3e3319 | p1@CYP4Z2P |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:61514208..61514213,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:61514208..61514213, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:189438863..189438865,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr3:189438863..189438865, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:189493099..189493102,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:189493099..189493102, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:42429365..42429366,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:42429365..42429366, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319 | p2@ENST00000559477 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:34380919..34380924,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr20:34380919..34380924, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:8781822..8781825,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:8781822..8781825, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:65990378..65990389,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:65990378..65990389, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:48010224..48010231,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr19:48010224..48010231, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:142889081..142889086,-#_eedbea526b0293360d2cd21efb3e3319 | p11@LRP1B |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:828104..828109,+#_eedbea526b0293360d2cd21efb3e3319 | p32@EFCAB4A |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:43540912..43540915,+#_eedbea526b0293360d2cd21efb3e3319 | p15@UMODL1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:43540870..43540878,+#_eedbea526b0293360d2cd21efb3e3319 | p10@UMODL1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:11455900..11455910,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr19:11455900..11455910, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:176519127..176519154,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr5:176519127..176519154, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:176514238..176514245,+#_eedbea526b0293360d2cd21efb3e3319 | p18@FGFR4 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:30584492..30584503,-#_eedbea526b0293360d2cd21efb3e3319 | p10@GSR |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:37485774..37485794,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:37485774..37485794, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:149863976..149863986,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr2:149863976..149863986, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:164559541..164559546,+#_eedbea526b0293360d2cd21efb3e3319 | p52@PBX1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:61514163..61514170,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:61514163..61514170, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:8781822..8781825,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:8781822..8781825, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:42429377..42429382,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:42429377..42429382, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:58943437..58943442,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr8:58943437..58943442, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:4722283..4722286,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr3:4722283..4722286, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:53559544..53559570,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:53559544..53559570, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319 | p9@GSR |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:67436996..67437009,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr11:67436996..67437009, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:46389767..46389768,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr14:46389767..46389768, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:40598486..40598500,+#_eedbea526b0293360d2cd21efb3e3319 | p1@ENST00000430724 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:48281411..48281419,-#_eedbea526b0293360d2cd21efb3e3319 | p5@ABCC11 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:249152282..249152291,-#_eedbea526b0293360d2cd21efb3e3319 | p21@ZNF692 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:11139818..11139830,-#_eedbea526b0293360d2cd21efb3e3319 | p6@EXOSC10 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:42429373..42429374,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr7:42429373..42429374, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:65990392..65990397,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr17:65990392..65990397, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319 | p@chr1:190447673..190447683, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chrX:153603570..153603573,-#_eedbea526b0293360d2cd21efb3e3319 | p@chrX:153603570..153603573, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:236686445..236686452,+#_eedbea526b0293360d2cd21efb3e3319 | p18@LGALS8 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:7618431..7618436,+#_eedbea526b0293360d2cd21efb3e3319 | p34@PPFIBP2 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:37485774..37485794,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr10:37485774..37485794, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:43540892..43540907,+#_eedbea526b0293360d2cd21efb3e3319 | p4@UMODL1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:46389767..46389768,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr14:46389767..46389768, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:176518002..176518011,+#_eedbea526b0293360d2cd21efb3e3319 | p19@FGFR4 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:189438863..189438865,+#_eedbea526b0293360d2cd21efb3e3319 | p@chr3:189438863..189438865, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:30584507..30584514,-#_eedbea526b0293360d2cd21efb3e3319 | p13@GSR |
