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|name=trabecular meshwork cell
|name=trabecular meshwork cell
|namespace=cell
|namespace=cell
|def="A cell that lines the trabecular meshwork, which is an area of tissue in theﾂ�eyeﾂ�located around the base of theﾂ�cornea, near theﾂ�ciliary body, and is responsible for draining theﾂ�aqueous humorﾂ�from the eye via theﾂ�anterior chamberﾂ�(the chamber on the front of the eye covered by the cornea). This cell may play a role in regulating intraocular pressure." [GOC:tfm, PMID:14500801]
|def="A cell that lines the trabecular meshwork, which is an area of tissue in the��eye��located around the base of the��cornea, near the��ciliary body, and is responsible for draining the��aqueous humor��from the eye via the��anterior chamber��(the chamber on the front of the eye covered by the cornea). This cell may play a role in regulating intraocular pressure." [GOC:tfm, PMID:14500801]
|xref=
|xref=
|is_a=CL:0000115
|is_a=CL:0000115
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|obo_creation_date=2010-09-23T04:18:50Z
|obo_creation_date=2010-09-23T04:18:50Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0005969
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:27, 26 June 2012

Name:trabecular meshwork cell
Namespace:cell
Definition:"A cell that lines the trabecular meshwork, which is an area of tissue in the��eye��located around the base of the��cornea, near the��ciliary body, and is responsible for draining the��aqueous humor��from the eye via the��anterior chamber��(the chamber on the front of the eye covered by the cornea). This cell may play a role in regulating intraocular pressure." [GOC:tfm, PMID:14500801]
Synonyms: "trabeculocyte" EXACT []
Created by:tmeehan
Creation date:2010-09-23T04:18:50Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)



Children


derives from:FF:0000188 (human trabecular meshwork cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002367 (trabecular meshwork cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.52e-50FFCP PHASE2:Hg19::chr4:111558887..111558892,-#_5a8edc84a318b2903ce313a4caf8dba8p14@PITX2
4.52e-50FFCP PHASE1:Hg19::chr4:111558887..111558892,-#_5a8edc84a318b2903ce313a4caf8dba8p14@PITX2
2.01e-40FFCP PHASE2:Hg19::chr6:105232902..105232908,-#_44169c723ea4c28dac5365c545449aeap8@HACE1
2.01e-40FFCP PHASE1:Hg19::chr6:105232902..105232908,-#_44169c723ea4c28dac5365c545449aeap8@HACE1
9.84e-37FFCP PHASE2:Hg19::chr19:10983098..10983110,+#_8e115855223e7d7ee8757e0bf86b0b85p@chr19:10983098..10983110, +
9.84e-37FFCP PHASE1:Hg19::chr19:10983098..10983110,+#_8e115855223e7d7ee8757e0bf86b0b85p@chr19:10983098..10983110, +
7.33e-32FFCP PHASE2:Hg19::chr6:50786479..50786490,+#_f3bcc032d2a88c39496041f8bcfb8f1dp6@TFAP2B
7.33e-32FFCP PHASE1:Hg19::chr6:50786479..50786490,+#_f3bcc032d2a88c39496041f8bcfb8f1dp6@TFAP2B
5.5e-31FFCP PHASE2:Hg19::chr4:111536662..111536674,-#_afacb0ce2ceb34ff65bfba590be472cfp3@ENST00000513690
5.5e-31FFCP PHASE1:Hg19::chr4:111536662..111536674,-#_afacb0ce2ceb34ff65bfba590be472cfp3@ENST00000513690
6.96e-30FFCP PHASE2:Hg19::chr3:129279438..129279448,-#_af22ea63efd1c5ecea3afc419cad0aacp17@PLXND1
6.96e-30FFCP PHASE1:Hg19::chr3:129279438..129279448,-#_af22ea63efd1c5ecea3afc419cad0aacp17@PLXND1
2.96e-29FFCP PHASE1:Hg19::chr6:50786631..50786635,+#_297cf22c6e0dcc88767677337aa54f08p11@TFAP2B
2.96e-29FFCP PHASE2:Hg19::chr6:50786631..50786635,+#_297cf22c6e0dcc88767677337aa54f08p11@TFAP2B
6.99e-29FFCP PHASE2:Hg19::chr1:153744081..153744096,+#_484f24029b45cb41d77d72254f2353cfp@chr1:153744081..153744096, +
6.99e-29FFCP PHASE1:Hg19::chr1:153744081..153744096,+#_484f24029b45cb41d77d72254f2353cfp@chr1:153744081..153744096, +
9.18e-26FFCP PHASE1:Hg19::chr11:61634768..61634777,+#_aeaf73c8be1212d62cc4351ecf30859bp@chr11:61634768..61634777, +
9.18e-26FFCP PHASE2:Hg19::chr11:61634768..61634777,+#_aeaf73c8be1212d62cc4351ecf30859bp@chr11:61634768..61634777, +
3.91e-25FFCP PHASE2:Hg19::chr6:50789737..50789746,+#_4d38f1fdcbe69b2e626f454e4c539da2p10@TFAP2B
3.91e-25FFCP PHASE1:Hg19::chr6:50789737..50789746,+#_4d38f1fdcbe69b2e626f454e4c539da2p10@TFAP2B
2.3e-22FFCP PHASE1:Hg19::chr8:60032478..60032492,+#_b10a6f66680495d8380b5cd0b049dc2ap2@ENST00000517898, p2@uc003xty.1
2.3e-22FFCP PHASE2:Hg19::chr8:60032478..60032492,+#_b10a6f66680495d8380b5cd0b049dc2ap2@ENST00000517898, p2@uc003xty.1
3.81e-21FFCP PHASE2:Hg19::chr6:41562324..41562340,+#_652a7fa8129054e7483761a2db983e1ep16@FOXP4
3.81e-21FFCP PHASE1:Hg19::chr6:41562324..41562340,+#_652a7fa8129054e7483761a2db983e1ep16@FOXP4
4.66e-21FFCP PHASE1:Hg19::chr11:61634723..61634731,+#_c93caa103ac6ce3285ffc5e35d65ba9ap@chr11:61634723..61634731, +
4.66e-21FFCP PHASE2:Hg19::chr11:61634723..61634731,+#_c93caa103ac6ce3285ffc5e35d65ba9ap@chr11:61634723..61634731, +
1.7e-19FFCP PHASE2:Hg19::chr19:11306638..11306657,-#_07b26f239b56cd431e351ea5c2924b47p13@KANK2
1.7e-19FFCP PHASE1:Hg19::chr19:11306638..11306657,-#_07b26f239b56cd431e351ea5c2924b47p13@KANK2
3.16e-18FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_c25dcb4f8b0d7be95c6d0bf97322ec2ep@chr6:78171774..78171792, +
3.16e-18FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_c25dcb4f8b0d7be95c6d0bf97322ec2ep@chr6:78171774..78171792, +
6.82e-18FFCP PHASE1:Hg19::chr6:50787466..50787500,+#_9db70357962f6985262170f23b1e2334p@chr6:50787466..50787500, +
6.82e-18FFCP PHASE2:Hg19::chr6:50787466..50787500,+#_9db70357962f6985262170f23b1e2334p@chr6:50787466..50787500, +
8.24e-18FFCP PHASE1:Hg19::chr11:47279167..47279178,+#_268b3237b5e8b5a487678e4e467c800ep10@NR1H3
8.24e-18FFCP PHASE2:Hg19::chr11:47279167..47279178,+#_268b3237b5e8b5a487678e4e467c800ep10@NR1H3
1.27e-17FFCP PHASE1:Hg19::chr7:143079562..143079573,+#_e2e815be7d00eac1179babc198531402p39@ZYX
1.27e-17FFCP PHASE2:Hg19::chr7:143079562..143079573,+#_e2e815be7d00eac1179babc198531402p39@ZYX
1.46e-17FFCP PHASE2:Hg19::chr4:13379049..13379051,+#_9f2bf65d7252f71addc5d87db105c714p@chr4:13379049..13379051, +
1.46e-17FFCP PHASE1:Hg19::chr4:13379049..13379051,+#_9f2bf65d7252f71addc5d87db105c714p@chr4:13379049..13379051, +
1.88e-17FFCP PHASE1:Hg19::chr9:116327296..116327307,+#_de783056292766624eaa1552836c79f0p21@RGS3
1.88e-17FFCP PHASE2:Hg19::chr9:116327296..116327307,+#_de783056292766624eaa1552836c79f0p21@RGS3
6.47e-17FFCP PHASE2:Hg19::chr1:27269555..27269558,+#_dbd730104cb1ef84ef0e7342e2ccb6afp@chr1:27269555..27269558, +
6.47e-17FFCP PHASE1:Hg19::chr1:27269555..27269558,+#_dbd730104cb1ef84ef0e7342e2ccb6afp@chr1:27269555..27269558, +
1.45e-16FFCP PHASE1:Hg19::chr12:57522813..57522825,-#_552b63e7733a15c9b72652af6e94544bp10@STAT6
1.45e-16FFCP PHASE2:Hg19::chr12:57522813..57522825,-#_552b63e7733a15c9b72652af6e94544bp10@STAT6
2.33e-16FFCP PHASE2:Hg19::chr1:156677222..156677267,-#_ed68fb67697caf99d55eefc88dddfbdep@chr1:156677222..156677267, -
2.33e-16FFCP PHASE1:Hg19::chr1:156677222..156677267,-#_ed68fb67697caf99d55eefc88dddfbdep@chr1:156677222..156677267, -
3.77e-16FFCP PHASE2:Hg19::chr4:1167293..1167308,-#_c203674301e66b08869e45098f3fca85p18@SPON2
3.77e-16FFCP PHASE1:Hg19::chr4:1167293..1167308,-#_c203674301e66b08869e45098f3fca85p18@SPON2
1.78e-15FFCP PHASE2:Hg19::chr9:129376073..129376080,-#_e739111c559657fed44b1c6fbdf7239dp2@ENST00000451449
1.78e-15FFCP PHASE1:Hg19::chr9:129376073..129376080,-#_e739111c559657fed44b1c6fbdf7239dp2@ENST00000451449
4.8e-15FFCP PHASE2:Hg19::chr22:45898587..45898598,+#_0529bc77a2e21932ba3debf32636df7ep13@FBLN1
4.8e-15FFCP PHASE1:Hg19::chr22:45898587..45898598,+#_0529bc77a2e21932ba3debf32636df7ep13@FBLN1
9.41e-15FFCP PHASE2:Hg19::chr19:38878454..38878497,-#_b0c840d2c3383ee2a609c3649e38870ep1@GGN
9.41e-15FFCP PHASE1:Hg19::chr19:38878454..38878497,-#_b0c840d2c3383ee2a609c3649e38870ep1@GGN
4.04e-14FFCP PHASE1:Hg19::chr9:123165410..123165421,-#_e8919299e44d0fe41245068ebb4fd562p14@CDK5RAP2
4.04e-14FFCP PHASE2:Hg19::chr9:123165410..123165421,-#_e8919299e44d0fe41245068ebb4fd562p14@CDK5RAP2
6.62e-14FFCP PHASE2:Hg19::chr6:50786547..50786564,+#_f147465f7cb852d1f1f91e00ec4f0133p3@TFAP2B
6.62e-14FFCP PHASE1:Hg19::chr6:50786547..50786564,+#_f147465f7cb852d1f1f91e00ec4f0133p3@TFAP2B
7.57e-14FFCP PHASE2:Hg19::chr12:45904157..45904158,-#_cebdfc5a529cf0ac45ed0875ac449506p@chr12:45904157..45904158, -
7.57e-14FFCP PHASE1:Hg19::chr12:45904157..45904158,-#_cebdfc5a529cf0ac45ed0875ac449506p@chr12:45904157..45904158, -
1.37e-13FFCP PHASE2:Hg19::chr3:4722301..4722324,+#_b1a9c1968d2a8e676b3a9ad79ebbd892p@chr3:4722301..4722324, +
1.37e-13FFCP PHASE1:Hg19::chr3:4722301..4722324,+#_b1a9c1968d2a8e676b3a9ad79ebbd892p@chr3:4722301..4722324, +
1.54e-13FFCP PHASE1:Hg19::chr12:1609708..1609723,+#_fb9ba835d83cff39ebdc62eca865708fp2@LOC100292680
1.54e-13FFCP PHASE2:Hg19::chr12:1609708..1609723,+#_fb9ba835d83cff39ebdc62eca865708fp2@LOC100292680
1.55e-13FFCP PHASE1:Hg19::chrX:13792679..13792690,-#_efe6b5a96e0b630b7b37aac0170428c7p@chrX:13792679..13792690, -
1.55e-13FFCP PHASE2:Hg19::chrX:13792679..13792690,-#_efe6b5a96e0b630b7b37aac0170428c7p@chrX:13792679..13792690, -
1.75e-13FFCP PHASE2:Hg19::chr12:81102260..81102302,+#_79be7240f33f9156a562017654ea35a1p@chr12:81102260..81102302, +
1.75e-13FFCP PHASE1:Hg19::chr12:81102260..81102302,+#_79be7240f33f9156a562017654ea35a1p@chr12:81102260..81102302, +
4.17e-13FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_d33c0ab1103775752e9037f764625d6ep@chr6:78171746..78171769, +
4.17e-13FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_d33c0ab1103775752e9037f764625d6ep@chr6:78171746..78171769, +
4.47e-13FFCP PHASE1:Hg19::chr7:100425082..100425085,-#_4434d03e9e07a30063d31dcc104f9a92p6@EPHB4
4.47e-13FFCP PHASE2:Hg19::chr7:100425082..100425085,-#_4434d03e9e07a30063d31dcc104f9a92p6@EPHB4
5.2e-13FFCP PHASE2:Hg19::chr19:7580234..7580253,+#_a9bebdc9e94f5dc41054b5b595cc981ap@chr19:7580234..7580253, +
5.2e-13FFCP PHASE1:Hg19::chr19:7580234..7580253,+#_a9bebdc9e94f5dc41054b5b595cc981ap@chr19:7580234..7580253, +
5.73e-13FFCP PHASE1:Hg19::chr1:110625307..110625328,+#_7fa2ba553dac36b6f1f5266b709ee03ap1@ENST00000554808
5.73e-13FFCP PHASE2:Hg19::chr1:110625307..110625328,+#_7fa2ba553dac36b6f1f5266b709ee03ap1@ENST00000554808
7.57e-13FFCP PHASE2:Hg19::chr1:110613276..110613299,-#_5b726f7a394fa5692b140f4efe213948p2@ALX3
7.57e-13FFCP PHASE1:Hg19::chr1:110613276..110613299,-#_5b726f7a394fa5692b140f4efe213948p2@ALX3
1.28e-12FFCP PHASE2:Hg19::chr1:110613238..110613272,-#_e191dd3194adca2b93af9111ec4a8f9dp1@ALX3
1.28e-12FFCP PHASE1:Hg19::chr1:110613238..110613272,-#_e191dd3194adca2b93af9111ec4a8f9dp1@ALX3
1.29e-12FFCP PHASE2:Hg19::chr2:12246664..12246694,+#_f15430974ece7d7a0fb9bb8ba16c2482p1@ENST00000449986
1.29e-12FFCP PHASE1:Hg19::chr2:12246664..12246694,+#_f15430974ece7d7a0fb9bb8ba16c2482p1@ENST00000449986
2.32e-12FFCP PHASE2:Hg19::chr16:54962394..54962407,+#_016d4486d3ac47681bc3c2e15eeeb4d0p@chr16:54962394..54962407, +
2.32e-12FFCP PHASE2:Hg19::chr17:27052878..27052889,+#_016d4486d3ac47681bc3c2e15eeeb4d0p@chr17:27052878..27052889, +
2.32e-12FFCP PHASE1:Hg19::chr16:54962394..54962407,+#_016d4486d3ac47681bc3c2e15eeeb4d0p@chr16:54962394..54962407, +
2.32e-12FFCP PHASE1:Hg19::chr17:27052878..27052889,+#_016d4486d3ac47681bc3c2e15eeeb4d0p@chr17:27052878..27052889, +
3.24e-12FFCP PHASE1:Hg19::chr2:71206252..71206265,+#_ad84ce9af1c7d44d5dd22187fc104611p8@ANKRD53
3.24e-12FFCP PHASE2:Hg19::chr1:201798251..201798253,+#_ad84ce9af1c7d44d5dd22187fc104611p5@IPO9
3.24e-12FFCP PHASE1:Hg19::chr1:201798251..201798253,+#_ad84ce9af1c7d44d5dd22187fc104611p5@IPO9
3.24e-12FFCP PHASE2:Hg19::chr2:71206252..71206265,+#_ad84ce9af1c7d44d5dd22187fc104611p8@ANKRD53
3.56e-12FFCP PHASE2:Hg19::chr6:50786571..50786590,+#_357fa7259ed9390750283c6d553fcb3ep2@TFAP2B
3.56e-12FFCP PHASE1:Hg19::chr6:50786571..50786590,+#_357fa7259ed9390750283c6d553fcb3ep2@TFAP2B
3.84e-12FFCP PHASE1:Hg19::chr11:19619705..19619737,+#_bbf528fb1b843d6447272c1d573df887p@chr11:19619705..19619737, +
3.84e-12FFCP PHASE2:Hg19::chr11:19619705..19619737,+#_bbf528fb1b843d6447272c1d573df887p@chr11:19619705..19619737, +
3.92e-12FFCP PHASE2:Hg19::chr1:68851155..68851158,+#_67eccd8fd9d0d66a640d833ffbf7da38p@chr1:68851155..68851158, +
3.92e-12FFCP PHASE1:Hg19::chr1:68851155..68851158,+#_67eccd8fd9d0d66a640d833ffbf7da38p@chr1:68851155..68851158, +
4.16e-12FFCP PHASE2:Hg19::chr2:26972981..26973006,+#_c2817383229743832e89c83b6fe414b8p@chr2:26972981..26973006, +
4.16e-12FFCP PHASE1:Hg19::chr2:26972981..26973006,+#_c2817383229743832e89c83b6fe414b8p@chr2:26972981..26973006, +
4.39e-12FFCP PHASE2:Hg19::chr6:111888474..111888487,-#_bf734b9d729650b7de47a9cd4a2d63e2p11@TRAF3IP2
4.39e-12FFCP PHASE1:Hg19::chr6:111888474..111888487,-#_bf734b9d729650b7de47a9cd4a2d63e2p11@TRAF3IP2

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