CL:0002396: Difference between revisions
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|id=CL:0002396 | |id=CL:0002396 | ||
|name=CD14-low, CD16-positive monocyte | |name=CD14-low, CD16-positive monocyte | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168] | |def="A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168] | ||
|xref= | |xref= | ||
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|obo_creation_date=2010-10-04T12:25:42Z | |obo_creation_date=2010-10-04T12:25:42Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:27, 26 June 2012
| Name: | CD14-low, CD16-positive monocyte |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A patrolling monocyte that is CD14-low and CD16-positive." [GOC:tfm, PMID:20870168] |
| Comments: | Markers are associated with human monocytes. |
| Created by: | tmeehan |
| Creation date: | 2010-10-04T12:25:42Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000875(non-classical monocyte) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11790-124B8 (CD14-CD16+ Monocytes, donor1)
- 11800-124C9 (CD14-CD16+ Monocytes, donor2)
- 11911-125G3 (CD14-CD16+ Monocytes, donor3)
Mouse (Mus musculus)
- 11790-124B8 (CD14-CD16+ Monocytes, donor1)
- 11800-124C9 (CD14-CD16+ Monocytes, donor2)
- 11911-125G3 (CD14-CD16+ Monocytes, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002396 (CD14-low, CD16-positive monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.27e-147 | FFCP PHASE2:Hg19::chr8:144480343..144480350,-#_8052815ad99a07e1908f3c944eae9f31 | p@chr8:144480343..144480350, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr8:144480343..144480350,-#_8052815ad99a07e1908f3c944eae9f31 | p@chr8:144480343..144480350, - |
| 1.47e-146 | FFCP PHASE1:Hg19::chr15:22550731..22550738,+#_3aafee2d74977a21620e140b924109fc | p@chr15:22550731..22550738, + |
| 1.47e-146 | FFCP PHASE2:Hg19::chr15:22550731..22550738,+#_3aafee2d74977a21620e140b924109fc | p@chr15:22550731..22550738, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr10:43609342..43609351,+#_fc9271cfd97bf2ddeac0547c9becc276 | p@chr10:43609342..43609351, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr15:22538560..22538601,-#_fc9271cfd97bf2ddeac0547c9becc276 | p@chr15:22538560..22538601, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr10:43609342..43609351,+#_fc9271cfd97bf2ddeac0547c9becc276 | p@chr10:43609342..43609351, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr15:22538560..22538601,-#_fc9271cfd97bf2ddeac0547c9becc276 | p@chr15:22538560..22538601, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr15:22550782..22550787,+#_c81b96a7a921a0c6243e4042f81ef888 | p@chr15:22550782..22550787, + |
| 7.78e-118 | FFCP PHASE2:Hg19::chr15:22550782..22550787,+#_c81b96a7a921a0c6243e4042f81ef888 | p@chr15:22550782..22550787, + |
| 1.16e-117 | FFCP PHASE2:Hg19::chr7:101923267..101923278,+#_41b02b24406b1252c5e6520e60008591 | p@chr7:101923267..101923278, + |
| 1.16e-117 | FFCP PHASE1:Hg19::chr7:101923267..101923278,+#_41b02b24406b1252c5e6520e60008591 | p@chr7:101923267..101923278, + |
| 4.06e-99 | FFCP PHASE1:Hg19::chr1:161519682..161519691,-#_c3f2eb9c8afa79ef2444df2e00474102 | p7@FCGR3A |
| 4.06e-99 | FFCP PHASE1:Hg19::chr10:115070193..115070207,-#_c3f2eb9c8afa79ef2444df2e00474102 | p@chr10:115070193..115070207, - |
| 4.06e-99 | FFCP PHASE2:Hg19::chr10:115070193..115070207,-#_c3f2eb9c8afa79ef2444df2e00474102 | p@chr10:115070193..115070207, - |
| 4.06e-99 | FFCP PHASE2:Hg19::chr1:161519682..161519691,-#_c3f2eb9c8afa79ef2444df2e00474102 | p7@FCGR3A |
| 2.17e-98 | FFCP PHASE1:Hg19::chr15:22550810..22550816,+#_2e63b034ac81e859b12397953db00e35 | p@chr15:22550810..22550816, + |
| 2.17e-98 | FFCP PHASE2:Hg19::chr15:22550810..22550816,+#_2e63b034ac81e859b12397953db00e35 | p@chr15:22550810..22550816, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr17:40351201..40351230,+#_e2b312ed5e23a9775ee1d50922eb9082 | p@chr17:40351201..40351230, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr10:134234820..134234825,+#_e2b312ed5e23a9775ee1d50922eb9082 | p@chr10:134234820..134234825, + |
| 3.03e-98 | FFCP PHASE2:Hg19::chr10:134234820..134234825,+#_e2b312ed5e23a9775ee1d50922eb9082 | p@chr10:134234820..134234825, + |
| 3.03e-98 | FFCP PHASE2:Hg19::chr17:40351201..40351230,+#_e2b312ed5e23a9775ee1d50922eb9082 | p@chr17:40351201..40351230, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr17:47287786..47287800,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr17:47287786..47287800, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:20581331..20581339,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:20581331..20581339, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr12:29727591..29727616,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr12:29727591..29727616, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:20581331..20581339,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:20581331..20581339, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:20581377..20581387,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:20581377..20581387, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr15:22550722..22550726,+#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr15:22550722..22550726, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr7:155055063..155055078,+#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:155055063..155055078, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:20581377..20581387,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:20581377..20581387, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr15:22550722..22550726,+#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr15:22550722..22550726, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr7:155055063..155055078,+#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr7:155055063..155055078, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr17:47287786..47287800,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr17:47287786..47287800, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr12:29727591..29727616,-#_a65b47928bf2ca75f034c6aeca89fdb0 | p@chr12:29727591..29727616, - |
| 3.04e-85 | FFCP PHASE1:Hg19::chr16:1538765..1538796,-#_1567fa0c880163a614cad6b9d7740851 | p1@PTX4 |
| 3.04e-85 | FFCP PHASE2:Hg19::chr16:1538765..1538796,-#_1567fa0c880163a614cad6b9d7740851 | p1@PTX4 |
| 4.06e-85 | FFCP PHASE2:Hg19::chr15:75080883..75080890,+#_6e96df36ac0d158112c12e2ccc12a741 | p14@CSK |
| 4.06e-85 | FFCP PHASE1:Hg19::chr15:75080883..75080890,+#_6e96df36ac0d158112c12e2ccc12a741 | p14@CSK |
| 7.21e-85 | FFCP PHASE2:Hg19::chr4:2794535..2794549,-#_eb96e375d91520dbe003fe4035e08ead | p@chr4:2794535..2794549, - |
| 7.21e-85 | FFCP PHASE1:Hg19::chr4:2794535..2794549,-#_eb96e375d91520dbe003fe4035e08ead | p@chr4:2794535..2794549, - |
| 6.07e-75 | FFCP PHASE2:Hg19::chr9:137267629..137267639,-#_93cc63d43a49312b444d84afc133d316 | p@chr9:137267629..137267639, - |
| 6.07e-75 | FFCP PHASE1:Hg19::chr9:137267629..137267639,-#_93cc63d43a49312b444d84afc133d316 | p@chr9:137267629..137267639, - |
| 7.81e-75 | FFCP PHASE2:Hg19::chr6:31584663..31584673,-#_3517069eff5d56d324142db25b305188 | p@chr6:31584663..31584673, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr6:31584663..31584673,-#_3517069eff5d56d324142db25b305188 | p@chr6:31584663..31584673, - |
| 5.01e-67 | FFCP PHASE2:Hg19::chr6:144952186..144952227,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr6:144952186..144952227, + |
| 5.01e-67 | FFCP PHASE1:Hg19::chr10:114594528..114594539,-#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr10:114594528..114594539, - |
| 5.01e-67 | FFCP PHASE1:Hg19::chr6:144952186..144952227,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr6:144952186..144952227, + |
| 5.01e-67 | FFCP PHASE1:Hg19::chr16:4563100..4563144,-#_cafff6d76dd727dfa50d114ca1cbbcbb | p12@C16orf5 |
| 5.01e-67 | FFCP PHASE2:Hg19::chr3:101597149..101597179,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr3:101597149..101597179, + |
| 5.01e-67 | FFCP PHASE2:Hg19::chr20:825297..825306,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p7@FAM110A |
| 5.01e-67 | FFCP PHASE1:Hg19::chr3:101597149..101597179,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr3:101597149..101597179, + |
| 5.01e-67 | FFCP PHASE1:Hg19::chr20:825297..825306,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p7@FAM110A |
| 5.01e-67 | FFCP PHASE2:Hg19::chr16:4563100..4563144,-#_cafff6d76dd727dfa50d114ca1cbbcbb | p12@C16orf5 |
| 5.01e-67 | FFCP PHASE2:Hg19::chr10:114594528..114594539,-#_cafff6d76dd727dfa50d114ca1cbbcbb | p@chr10:114594528..114594539, - |
| 5.01e-67 | FFCP PHASE2:Hg19::chr2:29337114..29337117,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p21@CLIP4 |
| 5.01e-67 | FFCP PHASE1:Hg19::chr2:29337114..29337117,+#_cafff6d76dd727dfa50d114ca1cbbcbb | p21@CLIP4 |
| 6.27e-67 | FFCP PHASE2:Hg19::chr2:241906877..241906887,-#_15db1a33da06457c26a80efcb5740534 | p3@LOC200772 |
| 6.27e-67 | FFCP PHASE1:Hg19::chr2:241906877..241906887,-#_15db1a33da06457c26a80efcb5740534 | p3@LOC200772 |
| 6.27e-67 | FFCP PHASE2:Hg19::chr11:67415202..67415246,-#_15db1a33da06457c26a80efcb5740534 | p5@ACY3 |
| 6.27e-67 | FFCP PHASE1:Hg19::chr10:115080077..115080087,-#_15db1a33da06457c26a80efcb5740534 | p@chr10:115080077..115080087, - |
| 6.27e-67 | FFCP PHASE1:Hg19::chr11:67415202..67415246,-#_15db1a33da06457c26a80efcb5740534 | p5@ACY3 |
| 6.27e-67 | FFCP PHASE2:Hg19::chr10:115080077..115080087,-#_15db1a33da06457c26a80efcb5740534 | p@chr10:115080077..115080087, - |
| 9.82e-67 | FFCP PHASE2:Hg19::chr2:2685878..2685892,+#_30d7005f012ecd9637a082c983326abd | p@chr2:2685878..2685892, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr2:2685878..2685892,+#_30d7005f012ecd9637a082c983326abd | p@chr2:2685878..2685892, + |
| 9.82e-67 | FFCP PHASE2:Hg19::chr19:50285177..50285181,+#_30d7005f012ecd9637a082c983326abd | p@chr19:50285177..50285181, + |
| 9.82e-67 | FFCP PHASE1:Hg19::chr19:50285177..50285181,+#_30d7005f012ecd9637a082c983326abd | p@chr19:50285177..50285181, + |
| 9.82e-67 | FFCP PHASE2:Hg19::chr20:827656..827661,-#_30d7005f012ecd9637a082c983326abd | p@chr20:827656..827661, - |
| 9.82e-67 | FFCP PHASE1:Hg19::chr20:827656..827661,-#_30d7005f012ecd9637a082c983326abd | p@chr20:827656..827661, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:172232848..172232850,-#_b3a92d2bbfd5d0163c9c9484b390fe5a | p@chr5:172232848..172232850, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:172232848..172232850,-#_b3a92d2bbfd5d0163c9c9484b390fe5a | p@chr5:172232848..172232850, - |
| 3.76e-66 | FFCP PHASE2:Hg19::chr17:4689735..4689745,-#_678c76c256bafd6099dd933a1b5209cb | p2@VMO1 |
| 3.76e-66 | FFCP PHASE2:Hg19::chr8:56800914..56800925,+#_678c76c256bafd6099dd933a1b5209cb | p@chr8:56800914..56800925, + |
| 3.76e-66 | FFCP PHASE1:Hg19::chr17:4689735..4689745,-#_678c76c256bafd6099dd933a1b5209cb | p2@VMO1 |
| 3.76e-66 | FFCP PHASE1:Hg19::chr8:56800914..56800925,+#_678c76c256bafd6099dd933a1b5209cb | p@chr8:56800914..56800925, + |
| 3.76e-66 | FFCP PHASE2:Hg19::chr2:121011117..121011127,+#_678c76c256bafd6099dd933a1b5209cb | p16@RALB |
| 3.76e-66 | FFCP PHASE1:Hg19::chr2:121011117..121011127,+#_678c76c256bafd6099dd933a1b5209cb | p16@RALB |
| 4.68e-66 | FFCP PHASE2:Hg19::chr2:241906961..241906992,+#_0cffe6e0660757ce0c276235990e3ba0 | p@chr2:241906961..241906992, + |
| 4.68e-66 | FFCP PHASE1:Hg19::chr2:241906961..241906992,+#_0cffe6e0660757ce0c276235990e3ba0 | p@chr2:241906961..241906992, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr14:23282256..23282282,-#_376672dd648a094c83e0995e82daa7fd | p17@SLC7A7 |
| 1.33e-60 | FFCP PHASE2:Hg19::chr14:23282256..23282282,-#_376672dd648a094c83e0995e82daa7fd | p17@SLC7A7 |
| 1.33e-60 | FFCP PHASE1:Hg19::chr16:1538881..1538887,+#_376672dd648a094c83e0995e82daa7fd | p@chr16:1538881..1538887, + |
| 1.33e-60 | FFCP PHASE2:Hg19::chr16:1538881..1538887,+#_376672dd648a094c83e0995e82daa7fd | p@chr16:1538881..1538887, + |
| 1.62e-60 | FFCP PHASE2:Hg19::chr5:56136714..56136717,+#_043d8d2bea6c4881d969ada7d5d360fb | p@chr5:56136714..56136717, + |
| 1.62e-60 | FFCP PHASE1:Hg19::chr5:56136714..56136717,+#_043d8d2bea6c4881d969ada7d5d360fb | p@chr5:56136714..56136717, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr6:144980558..144980569,+#_debeb95d11f10215d0b0e6a76b6b5ca2 | p30@UTRN |
| 2.43e-60 | FFCP PHASE2:Hg19::chr3:50654306..50654308,-#_debeb95d11f10215d0b0e6a76b6b5ca2 | p@chr3:50654306..50654308, - |
| 2.43e-60 | FFCP PHASE1:Hg19::chr3:50654306..50654308,-#_debeb95d11f10215d0b0e6a76b6b5ca2 | p@chr3:50654306..50654308, - |
| 2.43e-60 | FFCP PHASE2:Hg19::chr3:50658125..50658131,+#_debeb95d11f10215d0b0e6a76b6b5ca2 | p@chr3:50658125..50658131, + |
| 2.43e-60 | FFCP PHASE1:Hg19::chr3:50658125..50658131,+#_debeb95d11f10215d0b0e6a76b6b5ca2 | p@chr3:50658125..50658131, + |
| 2.43e-60 | FFCP PHASE2:Hg19::chr6:144980558..144980569,+#_debeb95d11f10215d0b0e6a76b6b5ca2 | p30@UTRN |
| 1.22e-59 | FFCP PHASE2:Hg19::chr7:2797828..2797848,-#_1373b46de775c760539da5f5a70cfa99 | p@chr7:2797828..2797848, - |
| 1.22e-59 | FFCP PHASE1:Hg19::chr7:2797828..2797848,-#_1373b46de775c760539da5f5a70cfa99 | p@chr7:2797828..2797848, - |
| 2.4e-55 | FFCP PHASE1:Hg19::chr17:531709..531723,-#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr17:531709..531723, - |
| 2.4e-55 | FFCP PHASE2:Hg19::chr19:14546214..14546245,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr19:14546214..14546245, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr19:14546214..14546245,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr19:14546214..14546245, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr8:142384243..142384251,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr8:142384243..142384251, + |
| 2.4e-55 | FFCP PHASE1:Hg19::chr8:142384243..142384251,+#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr8:142384243..142384251, + |
| 2.4e-55 | FFCP PHASE2:Hg19::chr17:531709..531723,-#_4a5bb824cf8aea7ff0ed61d4ad0f8600 | p@chr17:531709..531723, - |
| 2.88e-55 | FFCP PHASE2:Hg19::chr2:86225195..86225216,-#_1ed052d09ed5781ee69e9cfcacf917b4 | p@chr2:86225195..86225216, - |
| 2.88e-55 | FFCP PHASE1:Hg19::chr2:86225195..86225216,-#_1ed052d09ed5781ee69e9cfcacf917b4 | p@chr2:86225195..86225216, - |
