CL:0002521: Difference between revisions
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|part_of= | |part_of=UBERON:0002190 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 13:04, 27 June 2012
| Name: | subcutaneous fat cell |
|---|---|
| Namespace: | cell |
| Definition: | "A fat cell that is part of subcutaneous adipose tissue." [GOC:tfm] |
| Synonyms: | "subcutaneous adipocyte" EXACT [] |
| Created by: | tmeehan |
| Creation date: | 2011-02-21T02:51:22Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000136(fat cell) |
|---|---|
| part_of: | UBERON:0002190(subcutaneous adipose tissue) |
Children
| derives from: | FF:0000011 (human subcutaneous adipocyte sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11336-117F4 (Adipocyte - subcutaneous, donor2)
- 11408-118E4 (Adipocyte - subcutaneous, donor3)
Mouse (Mus musculus)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11336-117F4 (Adipocyte - subcutaneous, donor2)
- 11408-118E4 (Adipocyte - subcutaneous, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002521 (subcutaneous fat cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.17e-98 | FFCP PHASE1:Hg19::chr17:17495407..17495419,-#_09753e6aa1e3eb641c90f8c0ff29d1f6 | p17@PEMT |
| 2.17e-98 | FFCP PHASE2:Hg19::chr17:17495407..17495419,-#_09753e6aa1e3eb641c90f8c0ff29d1f6 | p17@PEMT |
| 9.61e-85 | FFCP PHASE1:Hg19::chr11:111895969..111895977,+#_54c1f849add2f6b189707a9445cbe609 | p8@DLAT |
| 9.61e-85 | FFCP PHASE2:Hg19::chr11:111895969..111895977,+#_54c1f849add2f6b189707a9445cbe609 | p8@DLAT |
| 1.28e-84 | FFCP PHASE2:Hg19::chr3:12190006..12190011,+#_e358f2b8fbe42a4b17cb806b4c8c1488 | p19@SYN2 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr3:12190006..12190011,+#_e358f2b8fbe42a4b17cb806b4c8c1488 | p19@SYN2 |
| 1.29e-74 | FFCP PHASE1:Hg19::chr11:823806..823819,+#_d7d5a09c51178d241943c7ca5159b70c | p19@PNPLA2 |
| 1.29e-74 | FFCP PHASE2:Hg19::chr11:823806..823819,+#_d7d5a09c51178d241943c7ca5159b70c | p19@PNPLA2 |
| 5.84e-74 | FFCP PHASE1:Hg19::chr11:35232781..35232791,+#_74f7104734fa609bd9978f2436a8be36 | p1@U94903 |
| 5.84e-74 | FFCP PHASE2:Hg19::chr11:35232781..35232791,+#_74f7104734fa609bd9978f2436a8be36 | p1@U94903 |
| 1.54e-66 | FFCP PHASE1:Hg19::chr12:50503990..50504003,+#_9377de4aa04e95a6dac06c5b853779a4 | p@chr12:50503990..50504003, + |
| 1.54e-66 | FFCP PHASE2:Hg19::chr12:50503990..50504003,+#_9377de4aa04e95a6dac06c5b853779a4 | p@chr12:50503990..50504003, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr14:66872597..66872598,+#_869bcb19b950e3fb9c51fb1586c8abaf | p@chr14:66872597..66872598, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr14:66872597..66872598,+#_869bcb19b950e3fb9c51fb1586c8abaf | p@chr14:66872597..66872598, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:94286185..94286186,+#_869bcb19b950e3fb9c51fb1586c8abaf | p@chr12:94286185..94286186, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:94286185..94286186,+#_869bcb19b950e3fb9c51fb1586c8abaf | p@chr12:94286185..94286186, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:109593033..109593052,+#_9b8b5c8bbb48c67d2689d0900cfe5721 | p@chr12:109593033..109593052, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:109593033..109593052,+#_9b8b5c8bbb48c67d2689d0900cfe5721 | p@chr12:109593033..109593052, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr2:65356996..65357005,+#_445c0cf2370add73117a4cb5581d3165 | p@chr2:65356996..65357005, + |
| 4.68e-66 | FFCP PHASE1:Hg19::chr3:52269260..52269269,-#_445c0cf2370add73117a4cb5581d3165 | p@chr3:52269260..52269269, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr2:65356996..65357005,+#_445c0cf2370add73117a4cb5581d3165 | p@chr2:65356996..65357005, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr3:52269260..52269269,-#_445c0cf2370add73117a4cb5581d3165 | p@chr3:52269260..52269269, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr12:16758109..16758118,-#_0bb2682227ea9b1aeef6ac08eef8eb4e | p37@LMO3 |
| 6.53e-66 | FFCP PHASE2:Hg19::chr12:16758109..16758118,-#_0bb2682227ea9b1aeef6ac08eef8eb4e | p37@LMO3 |
| 2.98e-60 | FFCP PHASE2:Hg19::chr17:80382262..80382282,+#_da0c41ee4870104afb5e51d188875922 | p@chr17:80382262..80382282, + |
| 2.98e-60 | FFCP PHASE1:Hg19::chr17:80382262..80382282,+#_da0c41ee4870104afb5e51d188875922 | p@chr17:80382262..80382282, + |
| 1.68e-53 | FFCP PHASE2:Hg19::chr5:180258514..180258515,-#_2114140a6e0173284557590957c6ac36 | p15@uc003mmj.1 |
| 1.68e-53 | FFCP PHASE1:Hg19::chr5:180258514..180258515,-#_2114140a6e0173284557590957c6ac36 | p15@uc003mmj.1 |
| 2.19e-53 | FFCP PHASE1:Hg19::chr11:111896693..111896701,+#_6af92d3fd889a364b00c627c30390fe4 | p@chr11:111896693..111896701, + |
| 2.19e-53 | FFCP PHASE2:Hg19::chr11:111896693..111896701,+#_6af92d3fd889a364b00c627c30390fe4 | p@chr11:111896693..111896701, + |
| 1.35e-50 | FFCP PHASE1:Hg19::chr3:52821997..52822012,+#_c90ea7e38d29891997a7736abbbfe6b1 | p3@ITIH1 |
| 1.35e-50 | FFCP PHASE2:Hg19::chr3:52821997..52822012,+#_c90ea7e38d29891997a7736abbbfe6b1 | p3@ITIH1 |
| 3.13e-50 | FFCP PHASE2:Hg19::chr3:12190041..12190062,+#_2e029934c26a696eee043d2e58086e5e | p6@SYN2 |
| 3.13e-50 | FFCP PHASE1:Hg19::chr3:12190041..12190062,+#_2e029934c26a696eee043d2e58086e5e | p6@SYN2 |
| 7.56e-47 | FFCP PHASE1:Hg19::chr11:63273651..63273660,+#_2e30ada5dc9d86957b827c97d915515a | p7@LGALS12 |
| 7.56e-47 | FFCP PHASE2:Hg19::chr11:63273651..63273660,+#_2e30ada5dc9d86957b827c97d915515a | p7@LGALS12 |
| 1.41e-46 | FFCP PHASE2:Hg19::chr16:68325453..68325473,+#_d8f629990677aa2d6d3e6954d3cd212b | p@chr16:68325453..68325473, + |
| 1.41e-46 | FFCP PHASE1:Hg19::chr16:68325453..68325473,+#_d8f629990677aa2d6d3e6954d3cd212b | p@chr16:68325453..68325473, + |
| 5.0e-45 | FFCP PHASE1:Hg19::chr17:41004526..41004533,-#_d13e0e773960cef015259d438dbdb582 | p@chr17:41004526..41004533, - |
| 5.0e-45 | FFCP PHASE2:Hg19::chr17:41004526..41004533,-#_d13e0e773960cef015259d438dbdb582 | p@chr17:41004526..41004533, - |
| 6.25e-45 | FFCP PHASE1:Hg19::chr3:52821979..52821984,+#_7a26ca598ddfa6e730058f17aff27d12 | p14@ITIH1 |
| 6.25e-45 | FFCP PHASE2:Hg19::chr3:52821979..52821984,+#_7a26ca598ddfa6e730058f17aff27d12 | p14@ITIH1 |
| 7.81e-45 | FFCP PHASE2:Hg19::chr11:111896671..111896691,+#_72ed22ebb9bc001ff80a1954b12ca894 | p@chr11:111896671..111896691, + |
| 7.81e-45 | FFCP PHASE2:Hg19::chr10:113915737..113915754,-#_72ed22ebb9bc001ff80a1954b12ca894 | p@chr10:113915737..113915754, - |
| 7.81e-45 | FFCP PHASE2:Hg19::chr11:63273968..63273973,+#_72ed22ebb9bc001ff80a1954b12ca894 | p12@LGALS12 |
| 7.81e-45 | FFCP PHASE1:Hg19::chr11:111896671..111896691,+#_72ed22ebb9bc001ff80a1954b12ca894 | p@chr11:111896671..111896691, + |
| 7.81e-45 | FFCP PHASE1:Hg19::chr10:113915737..113915754,-#_72ed22ebb9bc001ff80a1954b12ca894 | p@chr10:113915737..113915754, - |
| 7.81e-45 | FFCP PHASE1:Hg19::chr11:63273968..63273973,+#_72ed22ebb9bc001ff80a1954b12ca894 | p12@LGALS12 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr15:83330983..83330997,-#_cbbfcb7a5ef44d5a4bd8d3e798796eba | p10@AP3B2 |
| 1.22e-44 | FFCP PHASE1:Hg19::chr15:83330983..83330997,-#_cbbfcb7a5ef44d5a4bd8d3e798796eba | p10@AP3B2 |
| 1.53e-44 | FFCP PHASE2:Hg19::chr5:150138790..150138796,-#_8f383a74310d58b851e2c73d5b5230fb | p18@DCTN4 |
| 1.53e-44 | FFCP PHASE1:Hg19::chr17:41003146..41003150,+#_8f383a74310d58b851e2c73d5b5230fb | p6@AOC3 |
| 1.53e-44 | FFCP PHASE1:Hg19::chr5:150138790..150138796,-#_8f383a74310d58b851e2c73d5b5230fb | p18@DCTN4 |
| 1.53e-44 | FFCP PHASE2:Hg19::chr17:41003146..41003150,+#_8f383a74310d58b851e2c73d5b5230fb | p6@AOC3 |
| 2.38e-44 | FFCP PHASE1:Hg19::chr8:27023434..27023437,-#_87f609887abed71a3a5be7936bbd3daa | p@chr8:27023434..27023437, - |
| 2.38e-44 | FFCP PHASE2:Hg19::chr8:27023434..27023437,-#_87f609887abed71a3a5be7936bbd3daa | p@chr8:27023434..27023437, - |
| 5.06e-41 | FFCP PHASE1:Hg19::chr5:76435093..76435109,+#_1610c637f03fba1002faa3e85609a000 | p1@ENST00000511547, p1@ENST00000515356 |
| 5.06e-41 | FFCP PHASE2:Hg19::chr5:76435093..76435109,+#_1610c637f03fba1002faa3e85609a000 | p1@ENST00000511547, p1@ENST00000515356 |
| 1.96e-40 | FFCP PHASE2:Hg19::chr3:9911748..9911751,-#_37ff0c6348cc7f3202f2f2e805a5272b | p@chr3:9911748..9911751, - |
| 1.96e-40 | FFCP PHASE1:Hg19::chr3:9911748..9911751,-#_37ff0c6348cc7f3202f2f2e805a5272b | p@chr3:9911748..9911751, - |
| 3.35e-40 | FFCP PHASE2:Hg19::chr3:186575301..186575315,+#_47281478b1ce87d5b03fafb5e8599c84 | p@chr3:186575301..186575315, + |
| 3.35e-40 | FFCP PHASE1:Hg19::chr3:186575301..186575315,+#_47281478b1ce87d5b03fafb5e8599c84 | p@chr3:186575301..186575315, + |
| 3.83e-40 | FFCP PHASE2:Hg19::chr7:155044107..155044121,-#_d3804450c4457748d59c0aac4b470a99 | p@chr7:155044107..155044121, - |
| 3.83e-40 | FFCP PHASE1:Hg19::chr7:155044107..155044121,-#_d3804450c4457748d59c0aac4b470a99 | p@chr7:155044107..155044121, - |
| 1.01e-38 | FFCP PHASE2:Hg19::chrX:151999438..151999444,-#_11a8da8cbabf26d50ac8b109a92d4219 | p3@CETN2 |
| 1.01e-38 | FFCP PHASE1:Hg19::chrX:151999438..151999444,-#_11a8da8cbabf26d50ac8b109a92d4219 | p3@CETN2 |
| 1.23e-38 | FFCP PHASE1:Hg19::chr1:109939715..109939728,+#_479603bc970425c0468106c1dcf11204 | p@chr1:109939715..109939728, + |
| 1.23e-38 | FFCP PHASE2:Hg19::chr1:109939715..109939728,+#_479603bc970425c0468106c1dcf11204 | p@chr1:109939715..109939728, + |
| 1.43e-38 | FFCP PHASE1:Hg19::chr3:52822026..52822045,+#_cd7b000c13cc54b814046119b9f89cbc | p2@ITIH1 |
| 1.43e-38 | FFCP PHASE2:Hg19::chr3:52822026..52822045,+#_cd7b000c13cc54b814046119b9f89cbc | p2@ITIH1 |
| 1.49e-38 | FFCP PHASE2:Hg19::chr11:77775063..77775072,+#_af9dbd2fbcabe8e2381baa03b736f62a | p4@THRSP |
| 1.49e-38 | FFCP PHASE2:Hg19::chr19:4512807..4512811,-#_af9dbd2fbcabe8e2381baa03b736f62a | p2@PLIN4 |
| 1.49e-38 | FFCP PHASE2:Hg19::chr1:236205344..236205359,-#_af9dbd2fbcabe8e2381baa03b736f62a | p@chr1:236205344..236205359, - |
| 1.49e-38 | FFCP PHASE1:Hg19::chr1:236205344..236205359,-#_af9dbd2fbcabe8e2381baa03b736f62a | p@chr1:236205344..236205359, - |
| 1.49e-38 | FFCP PHASE1:Hg19::chr11:77775063..77775072,+#_af9dbd2fbcabe8e2381baa03b736f62a | p4@THRSP |
| 1.49e-38 | FFCP PHASE1:Hg19::chr19:4512807..4512811,-#_af9dbd2fbcabe8e2381baa03b736f62a | p2@PLIN4 |
| 1.8e-38 | FFCP PHASE1:Hg19::chr13:36706070..36706078,-#_14b98608a6363841cc4cfa0d24bb679f | p@chr13:36706070..36706078, - |
| 1.8e-38 | FFCP PHASE2:Hg19::chr13:36706070..36706078,-#_14b98608a6363841cc4cfa0d24bb679f | p@chr13:36706070..36706078, - |
| 2.18e-38 | FFCP PHASE2:Hg19::chr10:53458769..53458785,+#_c4e677c6d263a3827cf1167b305e2e6a | p@chr10:53458769..53458785, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr10:53458769..53458785,+#_c4e677c6d263a3827cf1167b305e2e6a | p@chr10:53458769..53458785, + |
| 1.58e-37 | FFCP PHASE1:Hg19::chr9:34590839..34590855,-#_85fcfc50b8054f92db14cbc55b5df843 | p@chr9:34590839..34590855, - |
| 1.58e-37 | FFCP PHASE2:Hg19::chr9:34590839..34590855,-#_85fcfc50b8054f92db14cbc55b5df843 | p@chr9:34590839..34590855, - |
| 1.64e-36 | FFCP PHASE2:Hg19::chr3:9908708..9908727,-#_edc9495ddbb70a98896bba49b4e6bc2c | p@chr3:9908708..9908727, - |
| 1.64e-36 | FFCP PHASE1:Hg19::chr3:9908708..9908727,-#_edc9495ddbb70a98896bba49b4e6bc2c | p@chr3:9908708..9908727, - |
| 1.4e-35 | FFCP PHASE1:Hg19::chr5:150162032..150162062,+#_cc21576f0ed90b9ca1d5f40ed0f86e43 | p@chr5:150162032..150162062, + |
| 1.4e-35 | FFCP PHASE2:Hg19::chr5:150162032..150162062,+#_cc21576f0ed90b9ca1d5f40ed0f86e43 | p@chr5:150162032..150162062, + |
| 1.58e-35 | FFCP PHASE1:Hg19::chr11:63256386..63256431,-#_2513fd0f4fa98c03e0ecf23798f6f441 | p@chr11:63256386..63256431, - |
| 1.58e-35 | FFCP PHASE2:Hg19::chr7:100491869..100491891,-#_2513fd0f4fa98c03e0ecf23798f6f441 | p5@ACHE |
| 1.58e-35 | FFCP PHASE2:Hg19::chr11:63256386..63256431,-#_2513fd0f4fa98c03e0ecf23798f6f441 | p@chr11:63256386..63256431, - |
| 1.58e-35 | FFCP PHASE1:Hg19::chr7:100491869..100491891,-#_2513fd0f4fa98c03e0ecf23798f6f441 | p5@ACHE |
| 2.25e-35 | FFCP PHASE1:Hg19::chr6:53305337..53305366,-#_435553c773f3044c03afef9ed3853a9d | p@chr6:53305337..53305366, - |
| 2.25e-35 | FFCP PHASE2:Hg19::chr6:53305337..53305366,-#_435553c773f3044c03afef9ed3853a9d | p@chr6:53305337..53305366, - |
| 3.33e-34 | FFCP PHASE1:Hg19::chr17:41003393..41003400,+#_7909c54965922f7ff97c1d873ad19131 | p2@CU690716 |
| 3.33e-34 | FFCP PHASE2:Hg19::chr17:41003393..41003400,+#_7909c54965922f7ff97c1d873ad19131 | p2@CU690716 |
| 3.94e-34 | FFCP PHASE1:Hg19::chr3:169482605..169482616,-#_6008eb8a8246a80a223c0c6b6884b565 | p5@TERC |
| 3.94e-34 | FFCP PHASE2:Hg19::chr3:169482605..169482616,-#_6008eb8a8246a80a223c0c6b6884b565 | p5@TERC |
| 4.27e-34 | FFCP PHASE1:Hg19::chr20:42863465..42863472,+#_643d24e93200e92c018f394b79b8608a | p@chr20:42863465..42863472, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr18:69929214..69929219,+#_643d24e93200e92c018f394b79b8608a | p@chr18:69929214..69929219, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr20:42863465..42863472,+#_643d24e93200e92c018f394b79b8608a | p@chr20:42863465..42863472, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr12:108698640..108698652,-#_643d24e93200e92c018f394b79b8608a | p@chr12:108698640..108698652, - |
