FF:10444-106F3: Difference between revisions
From FANTOM5_SSTAR
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase=1 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.45!279.92!LHX9;;chr7:27205136..27205164,-!p1@HOXA9!1.87!72.80!HOXA9;;chr17:46682321..46682362,-!p1@HOXB6!1.74!54.18!HOXB6;;chr2:176969228..176969260,+!p1@HOXD11!1.65!43.41!HOXD11;;chr10:28034739..28034756,-!p1@MKX!1.59!37.76!MKX;;chr2:176969179..176969226,+!p2@HOXD11!1.53!32.53!HOXD11;;chr7:27205106..27205134,-!p2@HOXA9!1.39!23.54!HOXA9;;chr8:60031934..60031986,-!p6@TOX!1.35!21.55!TOX;;chr6:10415276..10415341,-!p2@TFAP2A!1.28!22.07!TFAP2A;;chr2:176969097..176969109,+!p3@HOXD11!1.28!17.99!HOXD11;;chr17:46667594..46667619,-!p1@HOXB3!1.27!17.78!HOXB3;;chr1:170632285..170632309,+!p1@PRRX1!1.24!18.72!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!1.21!178.24!MLLT11;;chr8:60031682..60031710,-!p2@TOX!1.21!24.58!TOX;;chr17:46692318..46692362,-!p5@HOXB8!1.21!15.06!HOXB8;;chr15:37392094..37392116,-!p6@MEIS2!1.20!18.31!MEIS2;;chr17:46692457..46692484,-!p2@HOXB8!1.20!14.96!HOXB8;;chr5:134369905..134369972,-!p1@PITX1!1.17!21.13!PITX1;;chr8:60031809..60031835,-!p4@TOX!1.16!17.15!TOX;;chr6:10412600..10412637,-!p1@TFAP2A!1.15!22.07!TFAP2A;;chr2:19558373..19558392,-!p1@OSR1!1.13!33.89!OSR1;;chr11:120107344..120107351,+!p1@POU2F3!1.13!15.27!POU2F3;;chr8:60031619..60031676,-!p1@TOX!1.12!26.57!TOX;;chr6:10412392..10412409,-!p4@TFAP2A!1.10!13.18!TFAP2A;;chr17:46675558..46675577,-!p2@HOXB6!1.10!11.51!HOXB6;;chr1:151032922..151032951,+!p2@MLLT11!1.09!19.04!MLLT11;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.77!KDM5D;;chr17:17726907..17726958,-!p2@SREBF1!1.06!65.80!SREBF1;;chr8:60031840..60031869,-!p5@TOX!1.06!10.36!TOX;;chr8:60031762..60031803,-!p3@TOX!1.05!14.96!TOX;;chr9:16705069..16705086,-!p3@BNC2!1.05!10.25!BNC2;;chr3:147127142..147127168,+!p1@ZIC1!1.03!9.62!ZIC1;;chr7:27212501..27212513,-!p5@HOXA10!1.02!9.52!HOXA10;;chr15:37392724..37392757,-!p1@MEIS2!1.00!42.15!MEIS2;;chr10:28032421..28032494,-!p2@MKX!1.00!9.00!MKX;;chr3:147127177..147127194,+!p2@ZIC1!0.99!8.79!ZIC1;;chr8:11561684..11561751,+!p1@GATA4!0.98!8.58!GATA4;;chr11:46299199..46299233,+!p1@CREB3L1!0.97!44.46!CREB3L1;;chr21:36421535..36421610,-!p2@RUNX1!0.97!30.23!RUNX1;;chr17:46692624..46692659,-!p3@HOXB8!0.97!8.37!HOXB8;;chr10:28034395..28034404,-!p9@MKX!0.97!8.37!MKX;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.30!PRRX1;;chr22:19748231..19748317,+!p1@TBX1!0.96!8.16!TBX1;;chr17:46690839..46690884,-!p1@HOXB8!0.96!8.16!HOXB8;;chr3:69915385..69915438,+!p3@MITF!0.95!7.85!MITF;;chr1:151032142..151032195,+!p5@MLLT11!0.94!15.17!MLLT11;;chr13:100634031..100634045,+!p1@ZIC2!0.94!7.64!ZIC2;;chr3:114343768..114343822,-!p1@ZBTB20!0.93!33.79!ZBTB20;;chr3:114343826..114343869,-!p4@ZBTB20!0.93!15.27!ZBTB20;;chr2:176969124..176969155,+!p5@HOXD11!0.91!7.11!HOXD11;;chr17:46692287..46692317,-!p7@HOXB8!0.91!7.11!HOXB8;;chr1:170633262..170633285,+!p3@PRRX1!0.90!8.05!PRRX1;;chr2:200323414..200323455,-!p1@SATB2!0.87!14.23!SATB2;;chr2:5832508..5832524,+!p1@SOX11!0.87!6.38!SOX11;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.86!66.00!GLIS2;;chr15:37392534..37392562,-!p10@MEIS2!0.85!6.69!MEIS2;;chr9:126774018..126774055,+!p1@LHX2!0.85!6.07!LHX2;;chr7:26191809..26191890,+!p1@NFE2L3!0.84!30.96!NFE2L3;;chr7:19157248..19157268,-!p1@TWIST1!0.84!17.47!TWIST1;;chr17:46622070..46622109,-!p1@HOXB2!0.84!13.91!HOXB2;;chr19:31840130..31840160,-!p2@TSHZ3!0.84!9.41!TSHZ3;;chr17:46622205..46622218,-!p3@HOXB2!0.84!7.01!HOXB2;;chr17:46667628..46667642,-!p2@HOXB3!0.84!5.86!HOXB3;;chr7:1577899..1577943,+!p3@MAFK!0.84!5.86!MAFK;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.84!5.86!HOXC5;;chr15:42749722..42749739,-!p2@ZFP106!0.82!10.46!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!0.82!7.64!SOX18;;chr7:28220198..28220269,-!p2@JAZF1!0.81!52.41!JAZF1;;chr5:133450365..133450444,+!p1@TCF7!0.81!26.88!TCF7;;chr11:65667884..65667895,-!p2@FOSL1!0.81!22.59!FOSL1;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.44!ZFY;;chr12:124873852..124873881,-!p3@NCOR2!0.80!34.73!NCOR2;;chr17:46622114..46622138,-!p4@HOXB2!0.79!8.16!HOXB2;;chr17:46688334..46688385,-!p1@HOXB7!0.79!7.74!HOXB7;;chr3:157823517..157823562,-!p1@SHOX2!0.79!5.65!SHOX2;;chr11:46299539..46299620,+!p2@CREB3L1!0.78!8.89!CREB3L1;;chr2:200322654..200322707,-!p2@SATB2!0.78!7.64!SATB2;;chr12:54380404..54380433,+!p3@HOXC10!0.77!4.92!HOXC10;;chr20:42295745..42295765,+!p1@MYBL2!0.76!85.25!MYBL2;;chr15:37392593..37392607,-!p13@MEIS2!0.76!5.86!MEIS2;;chr16:51185172..51185197,-!p1@SALL1!0.76!4.81!SALL1;;chr3:147111198..147111225,+!p4@ZIC1!0.76!4.81!ZIC1;;chr3:69915369..69915381,+!p4@MITF!0.76!4.71!MITF;;chr1:151032782..151032801,+!p4@MLLT11!0.75!9.94!MLLT11;;chr10:64134120..64134183,+!p1@ZNF365!0.75!5.65!ZNF365;;chr1:3569072..3569093,+!p1@TP73!0.75!4.60!TP73;;chr15:37392703..37392717,-!p8@MEIS2!0.74!6.69!MEIS2;;chr1:151032739..151032748,+!p6@MLLT11!0.74!5.86!MLLT11;;chr12:54332608..54332636,+!p1@HOXC13!0.74!4.50!HOXC13;;chr7:28725740..28725778,+!p1@CREB5!0.73!43.20!CREB5;;chr19:13134457..13134462,+!p5@NFIX!0.73!8.37!NFIX;;chr19:49864746..49864780,-!p2@TEAD2!0.73!6.28!TEAD2;;chr3:69811882..69811898,+!p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| |expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.45!279.92!LHX9;;chr7:27205136..27205164,-!p1@HOXA9!1.87!72.80!HOXA9;;chr17:46682321..46682362,-!p1@HOXB6!1.74!54.18!HOXB6;;chr2:176969228..176969260,+!p1@HOXD11!1.65!43.41!HOXD11;;chr10:28034739..28034756,-!p1@MKX!1.59!37.76!MKX;;chr2:176969179..176969226,+!p2@HOXD11!1.53!32.53!HOXD11;;chr7:27205106..27205134,-!p2@HOXA9!1.39!23.54!HOXA9;;chr8:60031934..60031986,-!p6@TOX!1.35!21.55!TOX;;chr6:10415276..10415341,-!p2@TFAP2A!1.28!22.07!TFAP2A;;chr2:176969097..176969109,+!p3@HOXD11!1.28!17.99!HOXD11;;chr17:46667594..46667619,-!p1@HOXB3!1.27!17.78!HOXB3;;chr1:170632285..170632309,+!p1@PRRX1!1.24!18.72!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!1.21!178.24!MLLT11;;chr8:60031682..60031710,-!p2@TOX!1.21!24.58!TOX;;chr17:46692318..46692362,-!p5@HOXB8!1.21!15.06!HOXB8;;chr15:37392094..37392116,-!p6@MEIS2!1.20!18.31!MEIS2;;chr17:46692457..46692484,-!p2@HOXB8!1.20!14.96!HOXB8;;chr5:134369905..134369972,-!p1@PITX1!1.17!21.13!PITX1;;chr8:60031809..60031835,-!p4@TOX!1.16!17.15!TOX;;chr6:10412600..10412637,-!p1@TFAP2A!1.15!22.07!TFAP2A;;chr2:19558373..19558392,-!p1@OSR1!1.13!33.89!OSR1;;chr11:120107344..120107351,+!p1@POU2F3!1.13!15.27!POU2F3;;chr8:60031619..60031676,-!p1@TOX!1.12!26.57!TOX;;chr6:10412392..10412409,-!p4@TFAP2A!1.10!13.18!TFAP2A;;chr17:46675558..46675577,-!p2@HOXB6!1.10!11.51!HOXB6;;chr1:151032922..151032951,+!p2@MLLT11!1.09!19.04!MLLT11;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.77!KDM5D;;chr17:17726907..17726958,-!p2@SREBF1!1.06!65.80!SREBF1;;chr8:60031840..60031869,-!p5@TOX!1.06!10.36!TOX;;chr8:60031762..60031803,-!p3@TOX!1.05!14.96!TOX;;chr9:16705069..16705086,-!p3@BNC2!1.05!10.25!BNC2;;chr3:147127142..147127168,+!p1@ZIC1!1.03!9.62!ZIC1;;chr7:27212501..27212513,-!p5@HOXA10!1.02!9.52!HOXA10;;chr15:37392724..37392757,-!p1@MEIS2!1.00!42.15!MEIS2;;chr10:28032421..28032494,-!p2@MKX!1.00!9.00!MKX;;chr3:147127177..147127194,+!p2@ZIC1!0.99!8.79!ZIC1;;chr8:11561684..11561751,+!p1@GATA4!0.98!8.58!GATA4;;chr11:46299199..46299233,+!p1@CREB3L1!0.97!44.46!CREB3L1;;chr21:36421535..36421610,-!p2@RUNX1!0.97!30.23!RUNX1;;chr17:46692624..46692659,-!p3@HOXB8!0.97!8.37!HOXB8;;chr10:28034395..28034404,-!p9@MKX!0.97!8.37!MKX;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.30!PRRX1;;chr22:19748231..19748317,+!p1@TBX1!0.96!8.16!TBX1;;chr17:46690839..46690884,-!p1@HOXB8!0.96!8.16!HOXB8;;chr3:69915385..69915438,+!p3@MITF!0.95!7.85!MITF;;chr1:151032142..151032195,+!p5@MLLT11!0.94!15.17!MLLT11;;chr13:100634031..100634045,+!p1@ZIC2!0.94!7.64!ZIC2;;chr3:114343768..114343822,-!p1@ZBTB20!0.93!33.79!ZBTB20;;chr3:114343826..114343869,-!p4@ZBTB20!0.93!15.27!ZBTB20;;chr2:176969124..176969155,+!p5@HOXD11!0.91!7.11!HOXD11;;chr17:46692287..46692317,-!p7@HOXB8!0.91!7.11!HOXB8;;chr1:170633262..170633285,+!p3@PRRX1!0.90!8.05!PRRX1;;chr2:200323414..200323455,-!p1@SATB2!0.87!14.23!SATB2;;chr2:5832508..5832524,+!p1@SOX11!0.87!6.38!SOX11;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.86!66.00!GLIS2;;chr15:37392534..37392562,-!p10@MEIS2!0.85!6.69!MEIS2;;chr9:126774018..126774055,+!p1@LHX2!0.85!6.07!LHX2;;chr7:26191809..26191890,+!p1@NFE2L3!0.84!30.96!NFE2L3;;chr7:19157248..19157268,-!p1@TWIST1!0.84!17.47!TWIST1;;chr17:46622070..46622109,-!p1@HOXB2!0.84!13.91!HOXB2;;chr19:31840130..31840160,-!p2@TSHZ3!0.84!9.41!TSHZ3;;chr17:46622205..46622218,-!p3@HOXB2!0.84!7.01!HOXB2;;chr17:46667628..46667642,-!p2@HOXB3!0.84!5.86!HOXB3;;chr7:1577899..1577943,+!p3@MAFK!0.84!5.86!MAFK;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.84!5.86!HOXC5;;chr15:42749722..42749739,-!p2@ZFP106!0.82!10.46!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!0.82!7.64!SOX18;;chr7:28220198..28220269,-!p2@JAZF1!0.81!52.41!JAZF1;;chr5:133450365..133450444,+!p1@TCF7!0.81!26.88!TCF7;;chr11:65667884..65667895,-!p2@FOSL1!0.81!22.59!FOSL1;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.44!ZFY;;chr12:124873852..124873881,-!p3@NCOR2!0.80!34.73!NCOR2;;chr17:46622114..46622138,-!p4@HOXB2!0.79!8.16!HOXB2;;chr17:46688334..46688385,-!p1@HOXB7!0.79!7.74!HOXB7;;chr3:157823517..157823562,-!p1@SHOX2!0.79!5.65!SHOX2;;chr11:46299539..46299620,+!p2@CREB3L1!0.78!8.89!CREB3L1;;chr2:200322654..200322707,-!p2@SATB2!0.78!7.64!SATB2;;chr12:54380404..54380433,+!p3@HOXC10!0.77!4.92!HOXC10;;chr20:42295745..42295765,+!p1@MYBL2!0.76!85.25!MYBL2;;chr15:37392593..37392607,-!p13@MEIS2!0.76!5.86!MEIS2;;chr16:51185172..51185197,-!p1@SALL1!0.76!4.81!SALL1;;chr3:147111198..147111225,+!p4@ZIC1!0.76!4.81!ZIC1;;chr3:69915369..69915381,+!p4@MITF!0.76!4.71!MITF;;chr1:151032782..151032801,+!p4@MLLT11!0.75!9.94!MLLT11;;chr10:64134120..64134183,+!p1@ZNF365!0.75!5.65!ZNF365;;chr1:3569072..3569093,+!p1@TP73!0.75!4.60!TP73;;chr15:37392703..37392717,-!p8@MEIS2!0.74!6.69!MEIS2;;chr1:151032739..151032748,+!p6@MLLT11!0.74!5.86!MLLT11;;chr12:54332608..54332636,+!p1@HOXC13!0.74!4.50!HOXC13;;chr7:28725740..28725778,+!p1@CREB5!0.73!43.20!CREB5;;chr19:13134457..13134462,+!p5@NFIX!0.73!8.37!NFIX;;chr19:49864746..49864780,-!p2@TEAD2!0.73!6.28!TEAD2;;chr3:69811882..69811898,+!p6@MITF!0.73!4.39!MITF;;chr5:134369879..134369898,-!p2@PITX1!0.73!4.39!PITX1;;chr5:172662197..172662216,-!p1@NKX2-5!0.73!4.39!NKX2-5;;chr15:37391588..37391604,-!p11@MEIS2!0.72!5.65!MEIS2;;chr15:37392576..37392589,-!p12@MEIS2!0.72!5.23!MEIS2;;chr1:197886421..197886432,+!p2@LHX9!0.72!4.29!LHX9;;chr20:42295713..42295738,+!p2@MYBL2!0.71!27.20!MYBL2;;chr2:121493425..121493474,+!p1@GLI2!0.71!9.73!GLI2;;chr17:46687959..46688007,-!p2@HOXB7!0.71!5.96!HOXB7;;chr18:53068911..53068935,-!p4@TCF4!0.71!4.71!TCF4;;chr2:66662510..66662521,+!p6@MEIS1!0.71!4.08!MEIS1;;chr10:102505493..102505546,+!p2@PAX2!0.71!4.08!PAX2;;chr13:100634130..100634143,+!p3@ZIC2!0.71!4.08!ZIC2;;chr17:70117153..70117174,+!p1@SOX9!0.70!46.55!SOX9;;chr1:247171316..247171336,-!p3@ZNF695!0.70!6.28!ZNF695;;chr12:77459306..77459365,-!p1@E2F7!0.69!55.96!E2F7;;chr12:125002827..125002855,-!p5@NCOR2!0.69!5.86!NCOR2;;chr17:46622229..46622257,-!p6@HOXB2!0.69!4.71!HOXB2;;chr9:4300050..4300118,-!p1@GLIS3!0.68!27.82!GLIS3;;chr17:46692603..46692621,-!p6@HOXB8!0.68!3.77!HOXB8;;chr1:170632250..170632277,+!p7@PRRX1!0.67!3.66!PRRX1;;chr22:22874610..22874616,-!p1@ZNF280A!0.67!3.66!ZNF280A;;chr17:41277372..41277418,-!p1@BRCA1!0.66!14.75!BRCA1;;chr3:107244229..107244254,+!p3@BBX!0.66!6.38!BBX;;chr3:181429704..181429722,+!p1@SOX2!0.66!3.56!SOX2;;chr6:10412576..10412599,-!p5@TFAP2A!0.66!3.56!TFAP2A;;chr19:21264991..21265026,+!p1@ZNF714!0.65!26.57!ZNF714;;chr8:67525443..67525459,-!p2@MYBL1!0.65!5.54!MYBL1;;chr14:33408072..33408114,+!p2@NPAS3!0.65!4.18!NPAS3;;chr13:100623375..100623425,-!p1@ZIC5!0.65!3.45!ZIC5;;chr17:7590797..7590815,-!p1@TP53!0.64!172.39!TP53;;chr5:176738887..176738934,-!p1@MXD3!0.64!26.05!MXD3;;chr9:130954041..130954121,-!p2@CIZ1!0.64!16.84!CIZ1;;chr12:54393880..54393962,+!p1@HOXC9!0.64!3.35!HOXC9;;chr17:46667561..46667572,-!p4@HOXB3!0.64!3.35!HOXB3;;chr7:77428149..77428220,+!p1@PHTF2!0.63!39.33!PHTF2;;chr20:32274179..32274213,-!p1@E2F1!0.63!25.52!E2F1;;chr15:37392616..37392638,-!p2@MEIS2!0.63!11.82!MEIS2;;chr2:42721205..42721307,+!p4@MTA3!0.63!3.24!MTA3;;chr1:170632959..170632987,+!p4@PRRX1!0.62!3.56!PRRX1;;chr3:114343870..114343887,-!p9@ZBTB20!0.62!3.14!ZBTB20;;chr9:128509663..128509715,+!p1@PBX3!0.61!12.03!PBX3;;chr16:1429627..1429662,-!p2@UNKL!0.61!10.36!UNKL;;chr21:36259445..36259519,-!p4@RUNX1!0.61!9.83!RUNX1;;chr19:13134772..13134822,+!p2@NFIX!0.61!4.92!NFIX;;chr2:66662281..66662308,+!p1@MEIS1!0.60!11.92!MEIS1;;chr2:71127699..71127744,+!p1@VAX2!0.60!6.90!VAX2;;chr15:80696703..80696754,+!p1@ARNT2!0.60!4.18!ARNT2;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.59!16.42!GLIS2;;chr5:72744594..72744609,-!p1@FOXD1!0.59!15.90!FOXD1;;chr16:29818199..29818216,+!p11@MAZ!0.59!5.23!MAZ;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.59!2.93!SEBOX;;chr18:53253323..53253359,-!p19@TCF4!0.59!2.93!TCF4;;chr6:28321971..28321995,-!p1@ZNF323!0.59!2.93!ZNF323;;chr3:52001448..52001478,-!p2@PCBP4!0.58!48.22!PCBP4;;chr12:124873357..124873401,-!p1@NCOR2!0.58!39.75!NCOR2;;chr16:69599899..69599919,+!p2@NFAT5!0.58!39.33!NFAT5;;chr17:40477163..40477183,-!p7@STAT3!0.58!2.82!STAT3;;chr14:33403881..33403924,+!p1@NPAS3!0.58!2.82!NPAS3;;chr15:37390482..37390572,-!p7@MEIS2!0.57!3.97!MEIS2;;chr10:28032548..28032559,-!p7@MKX!0.57!2.72!MKX;;chr11:19262421..19262455,-!p3@E2F8!0.57!2.72!E2F8;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.57!2.72!HOXC5;;chr9:124991204..124991246,-!p1@LHX6!0.57!2.72!LHX6;;chr2:172949484..172949522,+!p1@DLX1!0.57!2.72!DLX1;;chr3:147124307..147124336,-!p2@ZIC4!0.57!2.72!ZIC4;;chr3:52001426..52001447,-!p3@PCBP4!0.56!8.68!PCBP4;;chr3:147111231..147111281,+!p3@ZIC1!0.56!2.62!ZIC1;;chr4:111558135..111558198,-!p2@PITX2!0.56!2.62!PITX2;;chr13:100638100..100638115,+!p4@ZIC2!0.56!2.62!ZIC2;;chr16:31076332..31076388,-!p3@ZNF668!0.56!2.62!ZNF668;;chr7:27212407..27212421,-!p9@HOXA10!0.56!2.62!HOXA10;;chr1:42384532..42384603,-!p2@HIVEP3!0.56!2.62!HIVEP3;;chr19:1652555..1652568,-!p2@TCF3!0.55!12.76!TCF3;;chr19:21265028..21265052,+!p2@ZNF714!0.55!5.23!ZNF714;;chr1:197886665..197886732,+!p3@LHX9!0.55!2.51!LHX9;;chr3:157824001..157824078,-!p2@SHOX2!0.55!2.51!SHOX2;;chrY:21906761..21906810,-!p2@KDM5D!0.55!2.51!KDM5D;;chr10:105110831..105110885,-!p1@PCGF6!0.54!30.02!PCGF6;;chr19:19729477..19729542,-!p1@PBX4!0.54!6.07!PBX4;;chr16:68573640..68573660,+!p3@ZFP90!0.54!3.56!ZFP90;;chr17:41623692..41623715,-!p1@ETV4!0.53!12.76!ETV4;;chr12:80084167..80084197,-!p5@PAWR!0.53!6.69!PAWR;;chr3:69811858..69811881,+!p5@MITF!0.53!2.41!MITF;;chr6:31126291..31126399,+!p1@TCF19!0.52!28.45!TCF19;;chr19:38720294..38720348,-!p1@DPF1!0.52!3.03!DPF1;;chr7:27239703..27239715,-!p1@HOXA13!0.52!2.30!HOXA13;;chr2:176994408..176994492,+!p1@HOXD8!0.52!2.30!HOXD8;;chr19:3366570..3366619,+!p1@NFIC!0.51!93.31!NFIC;;chr7:19157043..19157088,-!p2@TWIST1!0.51!6.80!TWIST1;;chr9:99180617..99180658,-!p1@ZNF367!0.51!5.75!ZNF367;;chr7:64023410..64023428,-!p2@ZNF680!0.51!3.97!ZNF680;;chr21:36260980..36261011,-!p1@RUNX1!0.50!82.22!RUNX1;;chr11:65667846..65667868,-!p1@FOSL1!0.50!76.26!FOSL1;;chr19:6110474..61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:43299404..43299463,-!p1@PRDM15!0.20!5.75!PRDM15;;chr19:2944907..2944981,-!p1@ZNF77!0.20!5.44!ZNF77;;chr19:12595586..12595637,-!p2@ZNF709!0.20!5.13!ZNF709;;chr1:249132556..249132573,+!p3@ZNF672!0.20!3.35!ZNF672;;chr14:21994337..21994442,-!p1@SALL2!0.20!3.14!SALL2;;chr6:41040923..41040952,+!p2@NFYA!0.20!3.03!NFYA;;chr12:133758115..133758138,+!p3@ZNF268!0.20!2.62!ZNF268;;chr17:7382911..7382932,-!p4@ZBTB4!0.20!2.30!ZBTB4;;chr19:21512115..21512135,-!p3@ZNF708!0.20!2.09!ZNF708;;chr19:45004584..45004601,-!p2@ZNF180!0.20!1.99!ZNF180;;chr14:61191049..61191080,-!p2@SIX4!0.20!1.67!SIX4;;chr10:22292675..22292686,-!p3@DNAJC1!0.20!1.57!DNAJC1;;chr8:67525524..67525543,-!p3@MYBL1!0.20!1.57!MYBL1;;chr1:204042723..204042784,+!p3@SOX13!0.20!1.57!SOX13;;chr1:247095162..247095173,-!p3@AHCTF1!0.20!1.36!AHCTF1;;chr10:114711019..114711041,+!p7@TCF7L2!0.20!1.36!TCF7L2;;chr2:178128552..178128574,-!p7@NFE2L2!0.20!1.26!NFE2L2;;chr2:208030705..208030718,-!p7@KLF7!0.20!1.26!KLF7;;chr3:170075124..170075136,+!p4@SKIL!0.20!1.15!SKIL;;chr20:35201857..35201882,+!p4@TGIF2!0.20!1.15!TGIF2;;chr2:61108689..61108694,+!p6@REL!0.20!0.94!REL;;chr2:66662895..66662907,+!p3@MEIS1!0.20!0.94!MEIS1;;chr19:58193388..58193411,+!p2@ZNF551,p4@ZNF776!0.20!0.84!ZNF551;;chr5:137804357..137804390,+!p4@EGR1!0.20!0.84!EGR1;;chr15:96869222..96869251,+!p18@NR2F2!0.20!0.84!NR2F2;;chr15:96869511..96869525,+!p16@NR2F2!0.20!0.73!NR2F2;;chr18:52989001..52989030,-!p10@TCF4!0.20!0.73!TCF4;;chr10:63808979..63808990,+!p8@ARID5B!0.20!0.73!ARID5B;;chr19:6279932..6280000,-!p1@MLLT1!0.19!35.56!MLLT1;;chr20:33413416..33413466,-!p1@NCOA6!0.19!16.11!NCOA6;;chr19:32836499..32836551,+!p1@ZNF507!0.19!14.54!ZNF507;;chr1:247095236..247095283,-!p2@AHCTF1!0.19!14.33!AHCTF1;;chr8:37553261..37553282,+!p2@ZNF703!0.19!10.15!ZNF703;;chr4:1873100..1873152,+!p1@WHSC1!0.19!10.04!WHSC1;;chr19:11925071..11925113,+!p1@ZNF440!0.19!9.52!ZNF440;;chr3:23986824..23986848,+!p2@NR1D2!0.19!7.11!NR1D2;;chr5:43120995..43121052,+!p1@ZNF131!0.19!6.38!ZNF131;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.19!6.17!ZNF20;;chr19:58193338..58193386,+!p1@ZNF551,p2@ZNF776!0.19!6.07!ZNF551;;chr12:80084333..80084380,-!p4@PAWR!0.19!6.07!PAWR;;chr16:29818160..29818188,+!p6@MAZ!0.19!5.75!MAZ;;chr17:47492252..47492265,-!p2@PHB!0.19!5.02!PHB;;chr5:137804484..137804498,+!p2@EGR1!0.19!4.92!EGR1;;chr3:71630980..71631110,-!p3@FOXP1!0.19!4.08!FOXP1;;chr3:5020939..5020952,+!p2@BHLHE40!0.19!3.66!BHLHE40;;chr20:39946361..39946379,-!p2@ZHX3!0.19!3.35!ZHX3;;chr19:36134528..36134563,+!p1@ETV2!0.19!3.24!ETV2;;chr5:43121607..43121649,+!p4@ZNF131!0.19!3.14!ZNF131;;chr16:54320675..54320715,-!p1@IRX3!0.19!2.20!IRX3;;chr4:146402843..146402864,+!p3@SMAD1!0.19!1.99!SMAD1;;chr3:40566488..40566502,+!p3@ZNF621!0.19!1.78!ZNF621;;chr19:21324863..21324874,+!p2@ZNF431!0.19!1.67!ZNF431;;chr6:45390002..45390023,+!p6@RUNX2!0.19!1.57!RUNX2;;chr20:42143136..42143161,+!p3@L3MBTL1!0.19!1.36!L3MBTL;;chr14:64970593..64970627,+!p5@ZBTB1!0.19!1.26!ZBTB1;;chr15:56535722..56535764,-!p3@RFX7!0.19!1.15!RFX7;;chr3:40547564..40547616,+!p1@ZNF620!0.19!1.15!ZNF620;;chr4:1873216..1873238,+!p5@WHSC1!0.19!1.05!WHSC1;;chr22:41697484..41697496,+!p3@ZC3H7B!0.19!0.94!ZC3H7B;;chr17:41622834..41622883,-!p6@ETV4!0.19!0.84!ETV4;;chr19:19303794..19303805,+!p5@RFXANK!0.19!0.73!RFXANK;;chrX:70503447..70503517,+!p1@NONO!0.18!109.73!NONO;;chr19:24216213..24216314,+!p1@ZNF254!0.18!23.33!ZNF254;;chr19:57791806..57791875,+!p1@ZNF460!0.18!16.00!ZNF460;;chr1:202777592..202777616,-!p2@KDM5B!0.18!14.23!KDM5B;;chr18:53255415..53255491,-!p1@TCF4!0.18!10.98!TCF4;;chr19:55987963..55987996,+!p1@ZNF628!0.18!9.62!ZNF628;;chr16:89284104..89284150,+!p1@ZNF778!0.18!9.10!ZNF778;;chr17:80477643..80477678,+!p2@FOXK2!0.18!7.95!FOXK2;;chr7:150974206..150974255,-!p1@SMARCD3!0.18!7.85!SMARCD3;;chr19:11071546..11071624,+!p2@SMARCA4!0.18!6.80!SMARCA4;;chr2:238600933..238600985,+!p3@LRRFIP1!0.18!6.69!LRRFIP1;;chr19:36545128..36545203,-!p1@THAP8!0.18!5.65!THAP8;;chr19:58962974..58963001,+!p1@ZNF324B!0.18!5.33!ZNF324B;;chr16:31085514..31085576,-!p1@ZNF668!0.18!4.92!ZNF668;;chr19:2900917..2900981,+!p1@ZNF57!0.18!4.50!ZNF57;;chr4:146402966..146402985,+!p2@SMAD1!0.18!4.39!SMAD1;;chr19:56915668..56915732,+!p1@ZNF583!0.18!4.29!ZNF583;;chr12:53625966..53626012,-!p2@RARG!0.18!2.82!RARG;;chr19:58920102..58920149,+!p2@ZNF584!0.18!2.62!ZNF584;;chr11:47235980..47236028,+!p3@DDB2!0.18!2.30!DDB2;;chr4:121843985..121844024,-!p2@PRDM5!0.18!2.20!PRDM5;;chr2:113033141..113033162,+!p2@ZC3H6!0.18!2.09!ZC3H6;;chr7:21467802..21467840,+!p3@SP4!0.18!1.99!SP4;;chr19:24097706..24097731,+!p2@ZNF726!0.18!1.78!ZNF726;;chr15:42743341..42743377,-!p3@ZFP106!0.18!1.46!ZFP106;;chr16:30418894..30418909,+!p2@ZNF771!0.18!1.46!ZNF771;;chr17:7388010..7388017,-!p5@ZBTB4!0.18!1.46!ZBTB4;;chr9:4299959..4299974,-!p4@GLIS3!0.18!1.36!GLIS3;;chr17:41622765..41622821,-!p2@ETV4!0.18!1.26!ETV4;;chr19:58144589..58144603,+!p2@ZNF211!0.18!1.05!ZNF211;;chr8:86089341..86089362,+!p5@E2F5!0.18!1.05!E2F5;;chr10:96122739..96122750,-!p3@NOC3L!0.18!1.05!NOC3L;;chr3:37216069..37216075,-!p4@LRRFIP2!0.18!0.94!LRRFIP2;;chr8:72756213..72756243,-!p5@MSC!0.18!0.94!MSC;;chr1:40997363..40997392,+!p2@ZNF684!0.18!0.94!ZNF684;;chr21:36231861..36231877,-!p12@RUNX1!0.18!0.94!RUNX1;;chr6:15245797..15245818,+!p8@JARID2!0.18!0.84!JARID2;;chr12:57916434..57916445,+!p11@MBD6!0.18!0.63!MBD6;;chr17:41623667..41623682,-!p8@ETV4!0.18!0.63!ETV4;;chr15:96869165..96869183,+!p20@NR2F2!0.18!0.52!NR2F2;;chr15:96869394..96869405,+!p25@NR2F2!0.18!0.52!NR2F2;;chr16:86600458..86600461,+!p3@FOXC2!0.18!0.52!FOXC2;;chr17:17740823..17740833,-!p8@SREBF1!0.18!0.52!SREBF1;;chr17:46131916..46131952,+!p7@NFE2L1!0.18!0.52!NFE2L1;;chr17:46806098..46806118,-!p3@HOXB13!0.18!0.52!HOXB13;;chr18:52988952..52988965,-!p23@TCF4!0.18!0.52!TCF4;;chr18:53070846..53070902,-!p6@TCF4!0.18!0.52!TCF4;;chr18:53089493..53089517,-!p15@TCF4!0.18!0.52!TCF4;;chr11:85393886..85393913,-!p3@CREBZF!0.18!0.52!CREBZF;;chr12:11802957..11802964,+!p8@ETV6!0.18!0.52!ETV6;;chr12:80084120..80084136,-!p15@PAWR!0.18!0.52!PAWR;;chr13:45150455..45150472,-!p8@TSC22D1!0.18!0.52!TSC22D1;;chr14:33403648..33403710,+!p3@NPAS3!0.18!0.52!NPAS3;;chr14:33403779..33403793,+!p6@NPAS3!0.18!0.52!NPAS3;;chr9:2159800..2159825,+!p15@SMARCA2!0.18!0.52!SMARCA2;;chrX:128657363..128657372,-!p3@SMARCA1!0.18!0.52!SMARCA1;;chr9:4299874..4299887,-!p9@GLIS3!0.18!0.52!GLIS3;;chrX:24167086..24167111,+!p4@ZFX!0.18!0.52!ZFX;;chr5:133450458..133450469,+!p4@TCF7!0.18!0.52!TCF7;;chr5:134369222..134369237,-!p8@PITX1!0.18!0.52!PITX1;;chr5:92918768..92918783,+!p8@NR2F1!0.18!0.52!NR2F1;;chr6:41701581..41701613,-!p2@TFEB!0.18!0.52!TFEB;;chr7:14028526..14028538,-!p11@ETV1!0.18!0.52!ETV1;;chr7:156803329..156803362,-!p1@MNX1!0.18!0.52!MNX1;;chr7:27170274..27170308,-!p3@HOXA4!0.18!0.52!HOXA4;;chr19:38720356..38720369,-!p4@DPF1!0.18!0.52!DPF1;;chr19:50542543..50542548,+!p2@ZNF473!0.18!0.52!ZNF473;;chr19:50832895..50832928,+!p3@NR1H2!0.18!0.52!NR1H2;;chr19:54024313..54024361,+!p7@ZNF331!0.18!0.52!ZNF331;;chr19:9420326..9420349,-!p@chr19:9420326..9420349,-!0.18!0.52!ZNF699;;chr1:10856694..10856715,-!p3@CASZ1!0.18!0.52!CASZ1;;chr1:158979922..158979933,+!p13@IFI16!0.18!0.52!IFI16;;chr1:197886646..197886657,+!p5@LHX9!0.18!0.52!LHX9;;chr1:197886772..197886790,+!p4@LHX9!0.18!0.52!LHX9;;chr1:44513995..44514031,+!p1@KLF17!0.18!0.52!KLF17;;chr21:34143971..34143983,-!p8@GCFC1!0.18!0.52!GCFC1;;chr21:36262372..36262386,-!p29@RUNX1!0.18!0.52!RUNX1;;chr21:36421401..36421414,-!p16@RUNX1!0.18!0.52!RUNX1;;chr22:42739839..42739867,-!p1@ENST00000515426!0.18!0.52!TCF20;;chr2:200323212..200323223,-!p8@SATB2!0.18!0.52!SATB2;;chr2:237077022..237077038,-!p1@GBX2!0.18!0.52!GBX2;;chr2:63277978..63277995,+!p2@OTX1!0.18!0.52!OTX1;;chr3:37217756..37217844,-!p1@LRRFIP2!0.17!85.46!LRRFIP2;;chr2:169312725..169312810,+!p1@CERS6!0.17!32.43!CERS6;;chr19:19496728..19496813,+!p2@GATAD2A!0.17!15.80!GATAD2A;;chr17:35766967..35767022,+!p1@TADA2A!0.17!14.12!TADA2A;;chr19:57901208..57901280,+!p1@ZNF548!0.17!10.04!ZNF548;;chr1:155532531..155532605,-!p1@ASH1L!0.17!8.37!ASH1L;;chr17:47439568..47439641,-!p2@ZNF652!0.17!6.90!ZNF652;;chrX:70503529..70503549,+!p2@NONO!0.17!6.38!NONO;;chr14:62162285..62162296,+!p3@HIF1A!0.17!6.17!HIF1A;;chr19:21512202..21512225,-!p1@ZNF708!0.17!6.07!ZNF708;;chr19:45909594..45909625,-!p2@PPP1R13L!0.17!5.44!PPP1R13L;;chr9:125667618..125667678,-!p2@RC3H2!0.17!5.23!RC3H2;;chr3:101395936..101395962,-!p2@ZBTB11!0.17!4.50!ZBTB11;;chr3:141087393..141087426,+!p3@ZBTB38!0.17!4.50!ZBTB38;;chr19:58920000..58920057,+!p1@ZNF584!0.17!4.39!ZNF584;;chr7:42276822..42276895,-!p2@GLI3!0.17!3.24!GLI3;;chr7:148892557..148892580,+!p4@ZNF282!0.17!2.93!ZNF282;;chr20:306051..306096,+!p3@SOX12!0.17!2.72!SOX12;; 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Revision as of 13:50, 29 June 2012
Name: | glioblastoma cell line:A172 |
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Species: | Human (Homo sapiens) |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Download raw sequence, BAM & CTSS | ||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
no result for this sample
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11248
library id: CNhs11185
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11248
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.611 |
10 | 10 | 0.277 |
100 | 100 | 0.944 |
101 | 101 | 0.422 |
102 | 102 | 0.484 |
103 | 103 | 0.624 |
104 | 104 | 0.624 |
105 | 105 | 0.771 |
106 | 106 | 3.11104e-4 |
107 | 107 | 0.38 |
108 | 108 | 0.561 |
109 | 109 | 0.378 |
11 | 11 | 0.321 |
110 | 110 | 0.698 |
111 | 111 | 0.374 |
112 | 112 | 0.0136 |
113 | 113 | 0.207 |
114 | 114 | 0.209 |
115 | 115 | 0.35 |
116 | 116 | 0.952 |
117 | 117 | 0.929 |
118 | 118 | 0.963 |
119 | 119 | 0.819 |
12 | 12 | 0.274 |
120 | 120 | 0.693 |
121 | 121 | 0.763 |
122 | 122 | 0.809 |
123 | 123 | 0.31 |
124 | 124 | 0.214 |
125 | 125 | 0.96 |
126 | 126 | 0.11 |
127 | 127 | 0.528 |
128 | 128 | 0.00968 |
129 | 129 | 0.434 |
13 | 13 | 0.0968 |
130 | 130 | 0.0775 |
131 | 131 | 0.229 |
132 | 132 | 0.632 |
133 | 133 | 0.402 |
134 | 134 | 0.478 |
135 | 135 | 0.0744 |
136 | 136 | 0.117 |
137 | 137 | 0.0176 |
138 | 138 | 0.211 |
139 | 139 | 0.00206 |
14 | 14 | 0.852 |
140 | 140 | 0.707 |
141 | 141 | 0.549 |
142 | 142 | 0.0452 |
143 | 143 | 0.445 |
144 | 144 | 0.622 |
145 | 145 | 0.624 |
146 | 146 | 0.671 |
147 | 147 | 0.46 |
148 | 148 | 0.204 |
149 | 149 | 0.257 |
15 | 15 | 0.67 |
150 | 150 | 0.834 |
151 | 151 | 0.534 |
152 | 152 | 0.33 |
153 | 153 | 0.166 |
154 | 154 | 0.456 |
155 | 155 | 0.262 |
156 | 156 | 0.707 |
157 | 157 | 0.757 |
158 | 158 | 0.685 |
159 | 159 | 0.651 |
16 | 16 | 0.172 |
160 | 160 | 0.349 |
161 | 161 | 0.589 |
162 | 162 | 0.892 |
163 | 163 | 0.108 |
164 | 164 | 0.271 |
165 | 165 | 0.55 |
166 | 166 | 0.604 |
167 | 167 | 0.252 |
168 | 168 | 0.552 |
169 | 169 | 0.43 |
17 | 17 | 0.541 |
18 | 18 | 0.353 |
19 | 19 | 0.373 |
2 | 2 | 0.61 |
20 | 20 | 0.827 |
21 | 21 | 0.599 |
22 | 22 | 0.733 |
23 | 23 | 0.37 |
24 | 24 | 0.633 |
25 | 25 | 0.26 |
26 | 26 | 0.442 |
27 | 27 | 0.132 |
28 | 28 | 0.326 |
29 | 29 | 0.331 |
3 | 3 | 0.371 |
30 | 30 | 0.66 |
31 | 31 | 0.962 |
32 | 32 | 0.00542 |
33 | 33 | 0.448 |
34 | 34 | 0.328 |
35 | 35 | 0.116 |
36 | 36 | 0.0219 |
37 | 37 | 0.517 |
38 | 38 | 0.593 |
39 | 39 | 0.235 |
4 | 4 | 0.832 |
40 | 40 | 0.128 |
41 | 41 | 0.424 |
42 | 42 | 0.925 |
43 | 43 | 0.109 |
44 | 44 | 0.189 |
45 | 45 | 0.911 |
46 | 46 | 0.239 |
47 | 47 | 0.837 |
48 | 48 | 0.735 |
49 | 49 | 0.0642 |
5 | 5 | 0.0718 |
50 | 50 | 0.936 |
51 | 51 | 0.671 |
52 | 52 | 0.107 |
53 | 53 | 0.873 |
54 | 54 | 0.958 |
55 | 55 | 0.798 |
56 | 56 | 0.545 |
57 | 57 | 0.622 |
58 | 58 | 0.0507 |
59 | 59 | 0.16 |
6 | 6 | 0.229 |
60 | 60 | 0.00448 |
61 | 61 | 0.806 |
62 | 62 | 0.0944 |
63 | 63 | 0.229 |
64 | 64 | 0.374 |
65 | 65 | 0.0847 |
66 | 66 | 6.33585e-4 |
67 | 67 | 0.807 |
68 | 68 | 0.741 |
69 | 69 | 0.459 |
7 | 7 | 0.0322 |
70 | 70 | 0.00331 |
71 | 71 | 0.476 |
72 | 72 | 0.26 |
73 | 73 | 0.314 |
74 | 74 | 0.888 |
75 | 75 | 0.219 |
76 | 76 | 0.0569 |
77 | 77 | 0.345 |
78 | 78 | 0.466 |
79 | 79 | 0.0943 |
8 | 8 | 0.799 |
80 | 80 | 0.773 |
81 | 81 | 0.483 |
82 | 82 | 0.381 |
83 | 83 | 0.851 |
84 | 84 | 0.701 |
85 | 85 | 0.00462 |
86 | 86 | 0.419 |
87 | 87 | 0.711 |
88 | 88 | 0.555 |
89 | 89 | 0.0335 |
9 | 9 | 0.114 |
90 | 90 | 0.761 |
91 | 91 | 0.0888 |
92 | 92 | 0.178 |
93 | 93 | 0.754 |
94 | 94 | 0.364 |
95 | 95 | 0.0995 |
96 | 96 | 0.167 |
97 | 97 | 0.0954 |
98 | 98 | 0.00431 |
99 | 99 | 0.583 |
library id: CNhs11185
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.643 |
10 | 10 | 0.359 |
100 | 100 | 0.99 |
101 | 101 | 0.762 |
102 | 102 | 0.219 |
103 | 103 | 0.439 |
104 | 104 | 0.633 |
105 | 105 | 0.551 |
106 | 106 | 5.4886e-4 |
107 | 107 | 0.397 |
108 | 108 | 0.557 |
109 | 109 | 0.396 |
11 | 11 | 0.319 |
110 | 110 | 0.666 |
111 | 111 | 0.509 |
112 | 112 | 0.00791 |
113 | 113 | 0.23 |
114 | 114 | 0.301 |
115 | 115 | 0.396 |
116 | 116 | 0.831 |
117 | 117 | 0.963 |
118 | 118 | 0.657 |
119 | 119 | 0.934 |
12 | 12 | 0.379 |
120 | 120 | 0.578 |
121 | 121 | 0.844 |
122 | 122 | 0.785 |
123 | 123 | 0.862 |
124 | 124 | 0.273 |
125 | 125 | 0.736 |
126 | 126 | 0.0342 |
127 | 127 | 0.689 |
128 | 128 | 0.00681 |
129 | 129 | 0.408 |
13 | 13 | 0.0756 |
130 | 130 | 0.0755 |
131 | 131 | 0.0761 |
132 | 132 | 0.479 |
133 | 133 | 0.577 |
134 | 134 | 0.671 |
135 | 135 | 0.122 |
136 | 136 | 0.121 |
137 | 137 | 0.00945 |
138 | 138 | 0.275 |
139 | 139 | 0.00813 |
14 | 14 | 0.943 |
140 | 140 | 0.591 |
141 | 141 | 0.603 |
142 | 142 | 0.0192 |
143 | 143 | 0.329 |
144 | 144 | 0.984 |
145 | 145 | 0.76 |
146 | 146 | 0.753 |
147 | 147 | 0.449 |
148 | 148 | 0.42 |
149 | 149 | 0.37 |
15 | 15 | 0.744 |
150 | 150 | 0.893 |
151 | 151 | 0.629 |
152 | 152 | 0.256 |
153 | 153 | 0.34 |
154 | 154 | 0.585 |
155 | 155 | 0.372 |
156 | 156 | 0.891 |
157 | 157 | 0.885 |
158 | 158 | 0.469 |
159 | 159 | 0.793 |
16 | 16 | 0.284 |
160 | 160 | 0.324 |
161 | 161 | 0.654 |
162 | 162 | 0.866 |
163 | 163 | 0.337 |
164 | 164 | 0.148 |
165 | 165 | 0.556 |
166 | 166 | 0.751 |
167 | 167 | 0.235 |
168 | 168 | 0.751 |
169 | 169 | 0.477 |
17 | 17 | 0.489 |
18 | 18 | 0.481 |
19 | 19 | 0.456 |
2 | 2 | 0.749 |
20 | 20 | 0.946 |
21 | 21 | 0.733 |
22 | 22 | 0.824 |
23 | 23 | 0.355 |
24 | 24 | 0.523 |
25 | 25 | 0.244 |
26 | 26 | 0.396 |
27 | 27 | 0.234 |
28 | 28 | 0.262 |
29 | 29 | 0.21 |
3 | 3 | 0.626 |
30 | 30 | 0.657 |
31 | 31 | 0.904 |
32 | 32 | 0.00719 |
33 | 33 | 0.395 |
34 | 34 | 0.24 |
35 | 35 | 0.137 |
36 | 36 | 0.0152 |
37 | 37 | 0.504 |
38 | 38 | 0.843 |
39 | 39 | 0.186 |
4 | 4 | 0.847 |
40 | 40 | 0.0351 |
41 | 41 | 0.43 |
42 | 42 | 0.756 |
43 | 43 | 0.0766 |
44 | 44 | 0.0649 |
45 | 45 | 0.917 |
46 | 46 | 0.241 |
47 | 47 | 0.919 |
48 | 48 | 0.872 |
49 | 49 | 0.0676 |
5 | 5 | 0.0484 |
50 | 50 | 0.992 |
51 | 51 | 0.623 |
52 | 52 | 0.0769 |
53 | 53 | 0.43 |
54 | 54 | 0.798 |
55 | 55 | 0.786 |
56 | 56 | 0.223 |
57 | 57 | 0.476 |
58 | 58 | 0.0269 |
59 | 59 | 0.15 |
6 | 6 | 0.372 |
60 | 60 | 0.00246 |
61 | 61 | 0.969 |
62 | 62 | 0.0783 |
63 | 63 | 0.303 |
64 | 64 | 0.391 |
65 | 65 | 0.121 |
66 | 66 | 8.6527e-4 |
67 | 67 | 0.934 |
68 | 68 | 0.914 |
69 | 69 | 0.444 |
7 | 7 | 0.0407 |
70 | 70 | 0.0296 |
71 | 71 | 0.539 |
72 | 72 | 0.13 |
73 | 73 | 0.199 |
74 | 74 | 0.888 |
75 | 75 | 0.275 |
76 | 76 | 0.0324 |
77 | 77 | 0.656 |
78 | 78 | 0.515 |
79 | 79 | 0.164 |
8 | 8 | 0.748 |
80 | 80 | 0.915 |
81 | 81 | 0.522 |
82 | 82 | 0.527 |
83 | 83 | 0.875 |
84 | 84 | 0.838 |
85 | 85 | 0.00404 |
86 | 86 | 0.367 |
87 | 87 | 0.502 |
88 | 88 | 0.736 |
89 | 89 | 0.0855 |
9 | 9 | 0.0637 |
90 | 90 | 0.478 |
91 | 91 | 0.0965 |
92 | 92 | 0.271 |
93 | 93 | 0.555 |
94 | 94 | 0.173 |
95 | 95 | 0.124 |
96 | 96 | 0.118 |
97 | 97 | 0.143 |
98 | 98 | 0.0123 |
99 | 99 | 0.503 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11248
library id: CNhs11185
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100016 A-172 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000333 (migratory neural crest cell)
0000055 (non-terminally differentiated cell)
0000548 (animal cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0002319 (neural cell)
0000221 (ectodermal cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000219 (motile cell)
0000123 (neuron associated cell (sensu Vertebrata))
0000125 (glial cell)
0000030 (glioblast)
0000255 (eukaryotic cell)
0000133 (neurectodermal cell)
0000339 (glioblast (sensu Vertebrata))
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0000033 (head)
0000479 (tissue)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0001017 (central nervous system)
0001016 (nervous system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0006238 (future brain)
0006601 (presumptive ectoderm)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA