FFCP PHASE1:Hg19::chr6:34208414..34208429,+: Difference between revisions
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|description=CAGE_peak_16_at_HMGA1_5end | |description=CAGE_peak_16_at_HMGA1_5end | ||
|id=chr6:34208414..34208429,+ | |id=chr6:34208414..34208429,+ | ||
|ontology_enrichment_celltype=CL: | |ontology_enrichment_celltype=CL:0000239!1.02e-08!3;CL:1000615!1.02e-08!3;CL:0002306!1.02e-08!3;CL:0002591!1.65e-07!1;CL:0002681!2.93e-07!13;CL:0002584!2.93e-07!13;CL:0002379!3.82e-07!1;CL:0000083!5.00e-07!4;CL:0000342!5.78e-07!1;CL:0002565!5.78e-07!1 | ||
|ontology_enrichment_disease=DOID:3620!3.82e-07!1;DOID:3565!3.82e-07!1;DOID:1793!5.00e-07!4;DOID:5662!6.12e-07!1 | |||
|ontology_enrichment_disease=DOID: | |ontology_enrichment_uberon=UBERON:0006853!1.02e-08!3;UBERON:0007685!1.02e-08!3;UBERON:0004134!1.02e-08!3;UBERON:0001225!2.93e-07!13;UBERON:0008987!2.93e-07!13;UBERON:0002506!5.78e-07!1;UBERON:0001769!5.78e-07!1 | ||
|ontology_enrichment_uberon=UBERON: | |||
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|short_description=p16@HMGA1 | |short_description=p16@HMGA1 | ||
}} | }} |
Revision as of 01:51, 5 August 2012
Short description: | p16@HMGA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HMGA1_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -84bp_to_uc003ojd.2_5end |
EntrezGene: | HMGA1 |
HGNC: | 5010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.