Personal tools

Coexpression cluster:C2897: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 5: Line 5:
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001986!4.02e-09!18;UBERON:0004638!4.02e-09!18;UBERON:0004852!4.02e-09!18;UBERON:0000487!8.91e-09!22;UBERON:0000055!3.62e-08!69;UBERON:0002049!8.65e-08!79;UBERON:0007798!8.65e-08!79;UBERON:0003081!3.64e-07!216;UBERON:0000058!5.06e-07!26;UBERON:0001981!5.99e-07!60;UBERON:0007500!5.99e-07!60;UBERON:0004537!5.99e-07!60;UBERON:0006965!5.99e-07!60
|ontology_enrichment_uberon=UBERON:0001986!4.02e-09!18;UBERON:0004638!4.02e-09!18;UBERON:0004852!4.02e-09!18;UBERON:0000487!8.91e-09!22;UBERON:0000055!3.62e-08!69;UBERON:0002049!8.65e-08!79;UBERON:0007798!8.65e-08!79;UBERON:0003081!3.64e-07!216;UBERON:0000058!5.06e-07!26;UBERON:0001981!5.99e-07!60;UBERON:0007500!5.99e-07!60;UBERON:0004537!5.99e-07!60;UBERON:0006965!5.99e-07!60
|tf_chipseq_enrich=ELF1#1997;4:4.25809795880754:0.00304152556578124:0.0161278375591301!FOS#2353;4:8.9979553088944:0.000152514771116863:0.00195465580815733!SPI1#6688;4:8.20432350852273:0.00022066188152768:0.00249926323011272
|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.0761719,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.00809151,0.0550418,0.00443949,0.000312758,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.000749166,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.355976,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.114558,0.199405,0.121709,0.347653,0.0759036,2.01615e-08,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.020224,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.0103372,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.0127261,0.236268,0.0532055,0.108938,0.224443,0.140245,0.000195464,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.00794845,0.0687034,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.00174837,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.00179581,0.0972471,0.0144563,0.180711,0.112956,0.0797807,0.0790532,0.00108189,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,1.35778e-05,0.109226,0.151958,0.178155,0.107176,0.146021,0.129196,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.0307561,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.0179298,0.73998,0.100371,0.0854389,0.0246898,0.00238365,0.381628,0.332539,0.186966,0.129819,0.389374,0.594055,0.414547,0.0308146,0.413223,0.639461,0.364388,0.0678774,0.0785304,0.500422,0.49089,0.687176,0.702495,0.241524,0.122191,0.234628,0.520726,0.143893,0.41477,0.279946,0.524104,0.467825,0.0102566,0.0138839,0.632838,0.0178302,0.127765,0.511459,0.586668,0.0588752,0.350886,0.380582,0.218919,0.0926754,0.286293,0.606558,0.708425,0.0105546,0.395864,0.00120797,0.0115272,0.188516,0.317802,0.512763,0.369971,0.578349,0.181193,0.464342,0.00649908,0.356005,0.235444,0.0255809,0.00926831,0.00287093,0.349116,0.302142,0.239545,0.11111,0.640367,0.343881,0.0442147,0.000413209,0.0167268,0.0774588,0.316925,0.356561,0.0112414,0.211506,0.0883859,0.0962508,0.238465,0.70198,0.0138092,0.323783,0.159267,0.0636247,0.0225709,0.093482,0.54723,0.00464429,0.090261,0.0228113,0.0596868,0.0984075,0.293026,0.00320607,0.332526,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.00195994,0.172079,0.000449587,0.421082,0.25441,0.202782,0.672876,0.0378508,0.0594062,0.165503,0.620475,0.266107,0.0023737,0.188259,0.189182,0.477589,0.131612,0.546448,0.560187,0.058245,0.198207,0.0616078,0.178485,0.00793151,0.175552,0.129238,0.651295,0.370995,0.360161,0.429696,0.386216,0.0133933,0.346931,0.0683036,0.627185,0.074467,0.333725,0.447838,0.289666,0.033464,0.513045,0.452694,0.203356,0.000711183,0.265037,0.629795,0.0543569,0.53531,0.0664979,0.424526,0.0939249,0.00110716,0.184395,0.55524,0.0766597,0.206945,0.304719,0.128825,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.433821,0.276604,0.436806,0.576549,0.499072,0.396083,0.0457983,0.00183829,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.0188226,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.0847761,0.164977,0.175633,0.139918,0.34669,0.0828344,0.135364,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.00616562,0.0879235,0.235214,0.145546,0.28124,0.102433,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.00273651,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.0407862,0.03989,0.171436,0.05892,0.0691994,0.268299,0.0212281,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.0752771,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.00182263,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.00470656,0.0522771,0.0787278,0.00648069,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.003001,0.170848,0.487259,0.051371,0.363016,0.100188,0.223102,0.107653,0.235857,0.017951,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.0454742,0.173134,0.101893,0.142875,0.167635,0.171311,0.0210393,0.0465855,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,3.85909e-07,0.0360207,0.171375,0.0430331,0.0769795,0.000712178,0.248017,0.00244747,0.0227764,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.00128218,0.0471607,0.163865,0.226359,0.404165,0.709625,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.00484807,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.00213517,0.24948,0.178639,0.000449988,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.0639386,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.0252604,0.243266,0.107021,0.238657,0.20272,0.0896967,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.0420826,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.459091,0.54832,0.502211,0.296013,0.0221603,0.537932,0.459994,0.523209,0.00885937,0.0354672,0.490559,0.45013,8.44993e-06,0.472542,0.111549,0.399934,0.529642,0.0301009,0.483077,0.590496,5.90135e-06,0.541914,0.0778742,0.0635843,0.934991,0.290703,0.254935,0.722684,0.478691,0.360199,0.0153629,0.657141,0.824761,0.365494,0.212703,0.0102049,0.364079,0.315494,0.579886,0.421038,0.0537414,0.0610883,0.187186,0.310552,0.00456853,0.142433,0.00961647,0.0698158,0.209437,0.55323,0.748403,0.598945,0.169076,0.464001,0.0051666,0.579004,0.870272,0.839946,0.0500888,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.0243103,0.294954,0.156999,0.35974,0.025886,0.39549,0.234254,0.357409,0.017253,0.0408829,0.50338,0.620526,0.404625,3.89768e-08,0.424691,0.132999,0.479581,0.62689,0.172925,0.642173,0.284496,0.00629645,0.512178,0.0102074,0.00957951,0.0299859,0.263302,0.192292,0.180735,0.439629,0.216102,0.254659,0.109605,0.397869,0.0121932,0.226491,0.417131,0.463987,0.627953,0.156131,0.454761,0.271678,0.483658,0.452129,0.000519892,0.261657,0.346776,3.45462e-07,0.545655,0.000329518,0.349112,8.43794e-05,0.385425,0.307816,0.00374881,0.386339,0.0131065,0.000370843,0.000570885,0.611661,0.319747,0.475047,0.0498053,0.000423576,0.282281,0.0159965,0.000241621,0.246827,0.0103145,0.70712,0.387134,0.00157847,0.358813,0.303004,0.574252,0.493455,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.42505,0.0355841,0.713293,0.479347,0.416962,0.000600154,0.378333,1.16839e-05,0.000288393,0.22798,0.102495,0.350933,0.0383658,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.133173,0.325254,0.0392149,0.00871319,0.231754,0.249415,0.283107,0.285648,2.5902e-05,0.391071,0.00037101,0.25563,0.240967,0.000790138,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.0099749,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.0395756,0.338547,0.147872,0.189388,0.0480552,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.0662546,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.00796989,0.387837,0.233244,0.207281,0.000752253,0.195748,0.000364573,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.04166,0.266687,0.184534,0.248707,0.0567862,0.15156,0.287598,0.313858,0.223773,0.25788,0.00116104,0.253768,0.30702,0.202977,0.170837,0.327002,0.0452813,0.222656,0.228479,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,2.37025e-06,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.0387226,0.0361085,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.0119686,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.000339729,0.0991993,0.289049,0.0393151,0.125746,0.112897,0.398354,0.222091,0.205977,0.00915515,0.0936726,0.0671916,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113
|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.0761719,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.00809151,0.0550418,0.00443949,0.000312758,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.000749166,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.355976,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.114558,0.199405,0.121709,0.347653,0.0759036,2.01615e-08,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.020224,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.0103372,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.0127261,0.236268,0.0532055,0.108938,0.224443,0.140245,0.000195464,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.00794845,0.0687034,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.00174837,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.00179581,0.0972471,0.0144563,0.180711,0.112956,0.0797807,0.0790532,0.00108189,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,1.35778e-05,0.109226,0.151958,0.178155,0.107176,0.146021,0.129196,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.0307561,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.0179298,0.73998,0.100371,0.0854389,0.0246898,0.00238365,0.381628,0.332539,0.186966,0.129819,0.389374,0.594055,0.414547,0.0308146,0.413223,0.639461,0.364388,0.0678774,0.0785304,0.500422,0.49089,0.687176,0.702495,0.241524,0.122191,0.234628,0.520726,0.143893,0.41477,0.279946,0.524104,0.467825,0.0102566,0.0138839,0.632838,0.0178302,0.127765,0.511459,0.586668,0.0588752,0.350886,0.380582,0.218919,0.0926754,0.286293,0.606558,0.708425,0.0105546,0.395864,0.00120797,0.0115272,0.188516,0.317802,0.512763,0.369971,0.578349,0.181193,0.464342,0.00649908,0.356005,0.235444,0.0255809,0.00926831,0.00287093,0.349116,0.302142,0.239545,0.11111,0.640367,0.343881,0.0442147,0.000413209,0.0167268,0.0774588,0.316925,0.356561,0.0112414,0.211506,0.0883859,0.0962508,0.238465,0.70198,0.0138092,0.323783,0.159267,0.0636247,0.0225709,0.093482,0.54723,0.00464429,0.090261,0.0228113,0.0596868,0.0984075,0.293026,0.00320607,0.332526,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.00195994,0.172079,0.000449587,0.421082,0.25441,0.202782,0.672876,0.0378508,0.0594062,0.165503,0.620475,0.266107,0.0023737,0.188259,0.189182,0.477589,0.131612,0.546448,0.560187,0.058245,0.198207,0.0616078,0.178485,0.00793151,0.175552,0.129238,0.651295,0.370995,0.360161,0.429696,0.386216,0.0133933,0.346931,0.0683036,0.627185,0.074467,0.333725,0.447838,0.289666,0.033464,0.513045,0.452694,0.203356,0.000711183,0.265037,0.629795,0.0543569,0.53531,0.0664979,0.424526,0.0939249,0.00110716,0.184395,0.55524,0.0766597,0.206945,0.304719,0.128825,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.433821,0.276604,0.436806,0.576549,0.499072,0.396083,0.0457983,0.00183829,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.0188226,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.0847761,0.164977,0.175633,0.139918,0.34669,0.0828344,0.135364,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.00616562,0.0879235,0.235214,0.145546,0.28124,0.102433,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.00273651,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.0407862,0.03989,0.171436,0.05892,0.0691994,0.268299,0.0212281,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.0752771,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.00182263,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.00470656,0.0522771,0.0787278,0.00648069,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.003001,0.170848,0.487259,0.051371,0.363016,0.100188,0.223102,0.107653,0.235857,0.017951,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.0454742,0.173134,0.101893,0.142875,0.167635,0.171311,0.0210393,0.0465855,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,3.85909e-07,0.0360207,0.171375,0.0430331,0.0769795,0.000712178,0.248017,0.00244747,0.0227764,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.00128218,0.0471607,0.163865,0.226359,0.404165,0.709625,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.00484807,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.00213517,0.24948,0.178639,0.000449988,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.0639386,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.0252604,0.243266,0.107021,0.238657,0.20272,0.0896967,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.0420826,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.459091,0.54832,0.502211,0.296013,0.0221603,0.537932,0.459994,0.523209,0.00885937,0.0354672,0.490559,0.45013,8.44993e-06,0.472542,0.111549,0.399934,0.529642,0.0301009,0.483077,0.590496,5.90135e-06,0.541914,0.0778742,0.0635843,0.934991,0.290703,0.254935,0.722684,0.478691,0.360199,0.0153629,0.657141,0.824761,0.365494,0.212703,0.0102049,0.364079,0.315494,0.579886,0.421038,0.0537414,0.0610883,0.187186,0.310552,0.00456853,0.142433,0.00961647,0.0698158,0.209437,0.55323,0.748403,0.598945,0.169076,0.464001,0.0051666,0.579004,0.870272,0.839946,0.0500888,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.0243103,0.294954,0.156999,0.35974,0.025886,0.39549,0.234254,0.357409,0.017253,0.0408829,0.50338,0.620526,0.404625,3.89768e-08,0.424691,0.132999,0.479581,0.62689,0.172925,0.642173,0.284496,0.00629645,0.512178,0.0102074,0.00957951,0.0299859,0.263302,0.192292,0.180735,0.439629,0.216102,0.254659,0.109605,0.397869,0.0121932,0.226491,0.417131,0.463987,0.627953,0.156131,0.454761,0.271678,0.483658,0.452129,0.000519892,0.261657,0.346776,3.45462e-07,0.545655,0.000329518,0.349112,8.43794e-05,0.385425,0.307816,0.00374881,0.386339,0.0131065,0.000370843,0.000570885,0.611661,0.319747,0.475047,0.0498053,0.000423576,0.282281,0.0159965,0.000241621,0.246827,0.0103145,0.70712,0.387134,0.00157847,0.358813,0.303004,0.574252,0.493455,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.42505,0.0355841,0.713293,0.479347,0.416962,0.000600154,0.378333,1.16839e-05,0.000288393,0.22798,0.102495,0.350933,0.0383658,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.133173,0.325254,0.0392149,0.00871319,0.231754,0.249415,0.283107,0.285648,2.5902e-05,0.391071,0.00037101,0.25563,0.240967,0.000790138,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.0099749,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.0395756,0.338547,0.147872,0.189388,0.0480552,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.0662546,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.00796989,0.387837,0.233244,0.207281,0.000752253,0.195748,0.000364573,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.04166,0.266687,0.184534,0.248707,0.0567862,0.15156,0.287598,0.313858,0.223773,0.25788,0.00116104,0.253768,0.30702,0.202977,0.170837,0.327002,0.0452813,0.222656,0.228479,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,2.37025e-06,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.0387226,0.0361085,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.0119686,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.000339729,0.0991993,0.289049,0.0393151,0.125746,0.112897,0.398354,0.222091,0.205977,0.00915515,0.0936726,0.0671916,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113
}}
}}

Revision as of 13:14, 5 September 2012


Full id: C2897_Gingival_Eosinophils_Tracheal_squamous_papillary_signet_Endothelial



Phase1 CAGE Peaks

Hg19::chr7:44113572..44113604,-p4@POLM
Hg19::chr7:44113612..44113641,-p3@POLM
Hg19::chr7:44113679..44113690,-p7@POLM
Hg19::chr7:44113711..44113734,-p5@POLM


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
endothelium4.02e-0918
blood vessel endothelium4.02e-0918
cardiovascular system endothelium4.02e-0918
simple squamous epithelium8.91e-0922
vessel3.62e-0869
vasculature8.65e-0879
vascular system8.65e-0879
lateral plate mesoderm3.64e-07216
duct5.06e-0726
blood vessel5.99e-0760
epithelial tube open at both ends5.99e-0760
blood vasculature5.99e-0760
vascular cord5.99e-0760


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
ELF1#199744.258097958807540.003041525565781240.0161278375591301
FOS#235348.99795530889440.0001525147711168630.00195465580815733
SPI1#668848.204323508522730.000220661881527680.00249926323011272



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

This analysis result is provided for C0 - C305 clusters.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C2897&oldid=2132043"