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MacroAPE 1083:TBX20 Heart-Tbx20-ChIP-Seq(GSE29636)/Homer: Difference between revisions

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.0110247!10717-109I6;0.0164818!10455-106G5;1.64848e-06!10534-107G3;0.0969401!10429-106D6;0.549636!10464-106H5;0.258393!10827-111C8;0.0726104!10789-110H6;0.0687199!10828-111C9;0.0519926!10788-110H5;0.429615!10792-110H9;0.0272647!10765-110E9;0.125434!10829-111D1;0.223006!10830-111D2;0.0062373!10831-111D3;0.418274!10832-111D4;0.0188994!10833-111D5;0.179036!10764-110E8;0.19141!10770-110F5;0.387913!10399-106A3;0.313349!10400-106A4;0.0687523!10405-106A9;0.0485508!10834-111D6;0.0531157!10835-111D7;0.0646716!10836-111D8;0.0476909!10837-111D9;0.161549!10699-109G6;0.0230095!10802-111A1;0.120759!10796-110I4;0.0336067!10010-101C1;0.000637924!10810-111A9;0.00198113!10421-106C7;0.0016163!10708-109H6;0.564457!12235-129G3;0.0831375!12236-129G4;0.986329!12237-129G5;0.5454!10167-103B5;0.722671!10151-102I7;1.39103e-05!10428-106D5;8.93702e-06!10795-110I3;0.337315!10805-111A4;0.0644497!10052-101G7;0.0657705!10189-103D9;0.0524249!10589-108D4;0.186552!10425-106D2;0.511383!10427-106D4;0.502359!10702-109G9;0.130086!10432-106D9;0.867447!10496-107C1;1.63565e-05!10718-109I7;4.74168e-06!10011-101C2;0.291479!10053-101G8;0.113127!10686-109F2;0.102626!10084-102B3;0.691843!10012-101C3;2.11489e-05!10085-102B4;1.10193e-05!10482-107A5;0.000167622!10419-106C5;0.00600843!10080-102A8;0.0258064!10760-110E4;0.234735!10709-109H7;2.68879e-06!10710-109H8;0.0050933!10703-109H1;0.000125756!10719-109I8;0.587412!10642-109A3;0.889554!10177-103C6;0.589621!10164-103B2;4.60092e-08!10173-103C2;1.03108e-05!10166-103B4;0.000635739!10083-102B2;0.000219645!10188-103D8;0.000341887!10552-107I3;0.000747575!10553-107I4;0.000448532!10013-101C4;0.0653028!10536-107G5;0.234624!10618-108G6;0.393355!10423-106C9;0.00152277!10785-110H2;0.0138615!12238-129G6;0.00476602!12239-129G7;0.410356!12240-129G8;0.332877!10416-106C2;0.845807!10801-110I9;0.189557!10766-110F1;0.00883743!10824-111C5;0.023535!10825-111C6;0.0180216!10826-111C7;0.0203676!10454-106G4;0.0227199!10409-106B4;0.0219052!10638-108I8;0.038383!10636-108I6;0.000710608!10513-107D9;2.00209e-05!10420-106C6;0.000858683!10082-102B1;0.259486!10014-101C5;0.400087!10070-101I7;0.100661!10452-106G2;0.17179!10453-106G3;0.620639!10449-106F8;0.533325!10042-101F6;0.310075!10069-101I6;5.00417e-06!10193-103E4;0.000345706!10631-108I1;1.01367e-05!10438-106E6;0.100038!10488-107B2;0.0014061!10196-103E7;0.00677487!10071-101I8;0.377482!10071-101I8;0.0459879!10041-101F5;0.000270783!10451-106G1;0.0247079!10450-106F9;0.399725!10604-108F1;0.0269621!10605-108F2;0.00729328!10606-108F3;0.00749017!10603-108E9;0.00172851!10497-107C2;0.00206857!10448-106F7;1.94504e-06!10643-109A4;0.0055221!10426-106D3;0.0140431!10431-106D8;0.000257899!10197-103E8;8.2233e-06!10443-106F2;0.0516468!10815-111B5;0.000641154!10816-111B6;0.00532678!10817-111B7;0.0134792!10015-101C6;0.00352142!10410-106B5;0.0449186!10054-101G9;0.168547!10758-110E2;0.00114462!10711-109H9;0.0308317!10040-101F4;1.07301e-05!10470-106I2;1.75087e-05!10415-106C1;0.0236211!10198-103E9;0.00320096!10614-108G2;0.245846!10612-108F9;0.0167523!10549-107H9;1.39821e-05!10615-108G3;0.0418862!10487-107B1;0.294322!10433-106E1;0.00471621!10688-109F4;0.0145623!10444-106F3;0.00232014!10444-106F3;0.333741!10485-107A8;0.384597!10413-106B8;0.0790383!10175-103C4;0.109077!10161-103A8;3.52358e-07!12131-128D7;4.75245e-07!10624-108H3;0.687906!10712-109I1;0.0424265!10205-103F7;0.715696!10206-103F8;8.38546e-06!10207-103F9;7.17354e-07!10050-101G5;0.00570868!10051-101G6;2.22661e-05!10016-101C7;1.34559e-06!10046-101G1;1.86798e-07!10778-110G4;6.08752e-08!10633-108I3;0.511927!10818-111B8;0.140123!10819-111B9;0.0233311!10820-111C1;0.0208188!10484-107A7;0.0285527!10808-111A7;0.346092!10169-103B7;0.0250239!10153-102I9;1.44849e-05!13425-144D5;1.20132e-05!13433-144E4;0.0011168!13437-144E8;0.000424483!11904-125F5;0.00343643!11905-125F6;0.459756!10039-101F3;0.401726!10791-110H8;1.92926e-05!10017-101C8;0.00504232!10045-101F9;0.121066!10509-107D5;0.115178!10839-111E2;0.0312009!10692-109F8;0.326484!10079-102A7;0.000392641!10078-102A6;7.87348e-05!10721-110A1;1.01346e-05!10569-108B2;0.0034713!10570-108B3;0.644091!10571-108B4;0.99854!10647-109A8;0.963711!10752-110D5;0.291275!10782-110G8;0.00979866!10726-110A6;0.650468!10018-101C9;0.0344292!10086-102B5;0.152759!10182-103D2;0.104327!10165-103B3;1.2686e-05!10499-107C4;5.24921e-07!10408-106B3;0.00690269!10019-101D1;0.000852274!10068-101I5;0.00991586!10075-102A3;0.00123896!10077-102A5;0.0108931!10727-110A7;0.101784!10775-110G1;0.235774!10412-106B7;0.442106!12231-129F8;0.000417535!12232-129F9;0.272116!12233-129G1;0.082551!12234-129G2;0.448948!10414-106B9;0.358795!10170-103B8;0.291882!10183-103D3;4.3716e-06!10150-102I6;9.90138e-06!10174-103C3;2.29366e-06!10155-103A2;3.86131e-05!10038-101F2;2.30326e-05!10838-111E1;3.87175e-06!10759-110E3;0.516927!10514-107E1;2.77246e-05!10465-106H6;0.0938756!10691-109F7;0.113602!10843-111E6;0.382545!10844-111E7;0.709216!11747-123G1;0.0329658!11748-123G2;0.00472511!11749-123G3;0.0103948!11750-123G4;0.0818387!11751-123G5;0.63358!11840-124H4;0.752081!11752-123G6;0.55148!11753-123G7;0.345851!11754-123G8;0.391198!11755-123G9;0.0105397!11756-123H1;0.0549703!11833-124G6;0.0167126!11760-123H5;0.0540641!11836-124G9;0.0147525!11758-123H3;0.49554!11835-124G8;0.419348!11762-123H7;0.567171!11838-124H2;0.0946261!11757-123H2;0.305526!11759-123H4;0.0807802!11761-123H6;0.210348!11842-124H6;0.0675175!11837-124H1;0.234342!10568-108B1;0.329823!13230-141I8;0.348644!13231-141I9;0.682728!10696-109G3;0.472276!10493-107B7;0.461789!10494-107B8;0.024609!10850-111F4;0.0422755!10851-111F5;0.0132571!10852-111F6;0.041731!10853-111F7;0.157877!10854-111F8;0.00242832!10855-111F9;0.00339364!10856-111G1;0.132658!10847-111F1;0.047687!10846-111E9;0.121459!10848-111F2;0.000402049!10845-111E8;6.47172e-07!10857-111G2;0.00257443!10858-111G3;0.000443581!10156-103A3;0.000933307!11901-125F2;2.39439e-06!11902-125F3;0.128696!11903-125F4;0.101181!10689-109F5;0.0730303!10648-109A9;0.0665705!10784-110H1;0.079247!10744-110C6;0.00526139!10772-110F7;0.185124!10474-106I6;0.0242658!10600-108E6;0.26269!10684-109E9;0.0179137!12226-129F3;0.249589!12227-129F4;0.00432668!10508-107D4;0.698079!10539-107G8;0.443861!10607-108F4;0.0846908!10555-107I6;0.158841!10774-110F9;0.121837!10637-108I7;0.00352035!10663-109C6;0.199423!10728-110A8;0.882018!10729-110A9;0.0748241!10430-106D7;0.519083!10730-110B1;0.65301!10813-111B3;0.325427!10812-111B2;0.556187!10037-101F1;0.986567!10172-103C1;1.38739e-05!10163-103B1;0.000113228!10076-102A4;7.63445e-06!10073-102A1;3.27344e-05!10036-101E9;0.000336065!10195-103E6;5.08617e-05!10277-104E7;1.81967e-05!10434-106E2;1.52668e-06!10550-107I1;0.000339312!10545-107H5;0.00787189!10544-107H4;0.0185335!10704-109H2;7.89414e-07!10510-107D6;0.245818!10558-107I9;0.286307!10020-101D2;0.266533!10732-110B3;0.444297!10049-101G4;0.266285!10698-109G5;0.286784!10437-106E5;0.00233001!10417-106C3;0.0455225!10035-101E8;0.0173515!10171-103B9;1.87006e-05!10157-103A4;2.7237e-06!10034-101E7;3.82539e-06!10072-101I9;1.13244e-05!10199-103F1;2.96546e-05!10200-103F2;0.0354271!10697-109G4;0.00797459!10723-110A3;0.2479!10179-103C8;0.00319442!10160-103A7;0.000497924!10180-103C9;0.000118609!10162-103A9;0.000167275!10021-101D3;3.30046e-05!10840-111E3;0.0711836!10706-109H4;0.0664701!10033-101E6;0.185832!10032-101E5;1.172e-05!10490-107B4;2.65612e-05!10439-106E7;0.0021551!10022-101D4;0.00147717!10176-103C5;0.124959!10469-106I1;1.07714e-05!10067-101I4;0.278847!10411-106B6;0.232425!10471-106I3;0.0168882!10030-101E3;0.0731386!10475-106I7;0.000355762!10787-110H4;0.684401!10477-106I9;0.328391!10695-109G2;0.371198!11771-123I7;0.574649!11772-123I8;0.056426!11773-123I9;0.201605!10093-102C3;0.81472!10442-106F1;0.0641066!10442-106F1;0.0926911!10201-103F3;0.0516036!10639-108I9;0.474127!11843-124H7;0.401448!11841-124H5;0.00625664!10693-109F9;1.0769e-05!10436-106E4;0.000166126!10483-107A6;0.00921987!10282-104F3;2.90806e-06!10023-101D5;3.13639e-05!10066-101I3;8.70246e-06!10065-101I2;0.011729!10800-110I8;0.0165929!10610-108F7;0.75673!10841-111E4;0.867433!10541-107H1;0.137945!10842-111E5;0.55101!10562-108A4;0.987565!10024-101D6;0.189152!10064-101I1;0.0282207!10609-108F6;0.340762!10048-101G3;0.00985096!10781-110G7;0.0971772!10181-103D1;0.270744!10159-103A6;5.4109e-06!10056-101H2;2.84439e-07!10737-110B8;0.00106307!10025-101D7;0.479471!10044-101F8;0.370895!10424-106D1;0.0967979!10463-106H4;0.0316861!10616-108G4;0.0237197!10486-107A9;0.00757357!10062-101H8;2.12911e-05!10202-103F4;0.563693!10158-103A5;0.0469053!10441-106E9;1.80884e-06!10031-101E4;0.144421!10063-101H9;3.213e-05!10063-101H9;0.000260036!11763-123H8;0.121965!11765-123I1;0.971062!11768-123I4;0.979469!10807-111A6;0.743867!10790-110H7;0.0111245!10798-110I6;0.00355555!10786-110H3;0.588391!10591-108D6;2.85233e-05!10593-108D8;7.68545e-05!10590-108D5;1.75578e-06!10026-101D8;0.000462103!10096-102C6;0.947186!10168-103B6;0.0394348!10154-103A1;4.37008e-06!10209-103G2;6.80222e-07!10061-101H7;0.00164132!10027-101D9;0.00595237!10043-101F7;0.187151!10783-110G9;0.0309406!10028-101E1;0.000995374!10060-101H6;0.000866874!10203-103F5;0.00267519!10059-101H5;0.0045946!10047-101G2;0.00855405!10029-101E2;0.121663!10058-101H4;0.131871!10418-106C4;0.00540066!10492-107B6;0.000986186!10694-109G1;9.52607e-05!10797-110I5;0.279677!10057-101H3;0.0191292!10100-102D1;0.0164563!10055-101H1;0.228135!10204-103F6;0.311872!10191-103E2;0.0943669!10563-108A5;0.00681113
|name=TBX20_Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
|name=TBX20_Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
|tomtom_result=achi#MA0207.1;-5;5.98293e-07;0.000284788;0.00056883;6;GGTGTTGACAGG;TGACAG;+!vis#MA0252.1;-5;2.67619e-05;0.0127387;0.0103291;6;GGTGTTGACAGG;TGACAG;+!hth#MA0227.1;-5;3.25922e-05;0.0155139;0.0103291;6;GGTGTTGACAGG;TGACAG;+!TOS8#MA0408.1;-3;0.000529255;0.251926;0.125798;8;GGTGTTGACAGG;TTTGACAG;-!Mafb#MA0117.1;-3;0.00169525;0.806939;0.322353;8;GGTGTTGACAGG;GCTGACGG;+!FOXO3#MA0157.1;-2;0.00476658;2.26889;0.755308;8;GGTGTTGACAGG;TGTTTACA;-!exd#MA0222.1;-2;0.00642846;3.05995;0.825839;8;GGTGTTGACAGG;TTTTGACA;+!CREB1#MA0018.1;0;0.00719051;3.42268;0.825839;12;GGTGTTGACAGG;CCTGGTGACGTC;+!FZF1#MA0298.1;-5;0.00781753;3.72115;0.825839;6;GGTGTTGACAGG;TGATAG;-!BRCA1#MA0133.1;-1;0.00980548;4.66741;0.93226;7;GGTGTTGACAGG;GTGTTGT;-!FKH2#MA0297.1;-2;0.0156846;7.46586;0.998691;7;GGTGTTGACAGG;TGTTTAC;-!REST#MA0138.2;12;0.018312;8.71652;0.998691;9;GGTGTTGACAGG;GGCGCTGTCCATGGTGCTGAA;-
}}
}}

Latest revision as of 12:01, 7 September 2012

Full Name: TBX20_Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Motif matrix
POACGT
1243148388119
26922552381
3361651696
4118951
514830392355
69737845
71318831
885841620
91996711018
108861110
1114236604116
129731938498

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
achi#MA0207.1-55.98293e-070.0002847880.000568836GGTGTTGACAGGTGACAG+
vis#MA0252.1-52.67619e-050.01273870.01032916GGTGTTGACAGGTGACAG+
hth#MA0227.1-53.25922e-050.01551390.01032916GGTGTTGACAGGTGACAG+
TOS8#MA0408.1-30.0005292550.2519260.1257988GGTGTTGACAGGTTTGACAG-
Mafb#MA0117.1-30.001695250.8069390.3223538GGTGTTGACAGGGCTGACGG+
FOXO3#MA0157.1-20.004766582.268890.7553088GGTGTTGACAGGTGTTTACA-
exd#MA0222.1-20.006428463.059950.8258398GGTGTTGACAGGTTTTGACA+
CREB1#MA0018.100.007190513.422680.82583912GGTGTTGACAGGCCTGGTGACGTC+
FZF1#MA0298.1-50.007817533.721150.8258396GGTGTTGACAGGTGATAG-
BRCA1#MA0133.1-10.009805484.667410.932267GGTGTTGACAGGGTGTTGT-
FKH2#MA0297.1-20.01568467.465860.9986917GGTGTTGACAGGTGTTTAC-
REST#MA0138.2120.0183128.716520.9986919GGTGTTGACAGGGGCGCTGTCCATGGTGCTGAA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:TBX20_Heart-Tbx20-ChIP-Seq(GSE29636)/Homer&oldid=2133540"