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MacroAPE 1083:TEF: Difference between revisions

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9-110H6;0.391009!10828-111C9;0.560183!10788-110H5;0.358976!10792-110H9;0.0573789!10765-110E9;0.171915!10829-111D1;0.0825094!10830-111D2;0.317914!10831-111D3;0.189174!10832-111D4;0.166059!10833-111D5;0.726285!10764-110E8;0.339498!10770-110F5;0.893304!10399-106A3;0.399738!10400-106A4;0.035421!10405-106A9;0.0520016!10834-111D6;0.0314428!10835-111D7;0.126552!10836-111D8;0.106177!10837-111D9;0.716738!10699-109G6;0.129173!10802-111A1;0.205409!10796-110I4;0.146698!10010-101C1;0.0154676!10810-111A9;0.053708!10421-106C7;0.269188!10708-109H6;0.768228!12235-129G3;0.147221!12236-129G4;0.497944!12237-129G5;0.0763481!10167-103B5;0.252471!10151-102I7;0.200523!10428-106D5;0.376167!10795-110I3;0.099437!10805-111A4;0.00322099!10052-101G7;0.374925!10189-103D9;0.0798469!10589-108D4;0.244953!10425-106D2;0.817585!10427-106D4;0.253402!10702-109G9;0.419607!10432-106D9;0.695022!10496-107C1;0.146185!10718-109I7;0.0332576!10011-101C2;0.411197!10053-101G8;0.0487181!10686-109F2;0.561202!10084-102B3;0.877349!10012-101C3;0.162826!10085-102B4;0.261906!10482-107A5;0.0923513!10419-106C5;0.405288!10080-102A8;0.0984277!10760-110E4;0.0504725!10709-109H7;0.118221!10710-109H8;0.107074!10703-109H1;0.0105967!10719-109I8;0.272144!10642-109A3;0.278348!10177-103C6;0.74839!10164-103B2;0.177852!10173-103C2;0.415829!10166-103B4;0.241801!10083-102B2;0.792396!10188-103D8;0.310641!10552-107I3;0.487901!10553-107I4;0.705251!10013-101C4;0.974527!10536-107G5;0.186993!10618-108G6;0.996856!10423-106C9;0.67531!10785-110H2;0.936282!12238-129G6;0.895544!12239-129G7;0.236919!12240-129G8;0.702049!10416-106C2;0.0524159!10801-110I9;0.550446!10766-110F1;0.0930827!10824-111C5;0.262254!10825-111C6;0.308901!10826-111C7;0.322469!10454-106G4;0.338319!10409-106B4;0.290297!10638-108I8;0.714395!10636-108I6;0.362033!10513-107D9;0.932045!10420-106C6;0.913871!10082-102B1;0.31859!10014-101C5;0.798584!10070-101I7;0.378727!10452-106G2;0.669206!10453-106G3;0.782!10449-106F8;0.455215!10042-101F6;0.360249!10069-101I6;0.436151!10193-103E4;0.283024!10631-108I1;0.197162!10438-106E6;0.603104!10488-107B2;0.826464!10196-103E7;0.416455!10071-101I8;0.0112526!10071-101I8;0.502399!10041-101F5;0.194004!10451-106G1;0.258851!10450-106F9;0.96716!10604-108F1;0.60731!10605-108F2;0.483168!10606-108F3;0.262361!10603-108E9;0.31283!10497-107C2;0.225061!10448-106F7;0.729672!10643-109A4;0.0408158!10426-106D3;0.889866!10431-106D8;0.0520602!10197-103E8;0.303243!10443-106F2;0.194595!10815-111B5;0.210287!10816-111B6;0.938388!10817-111B7;0.726776!10015-101C6;0.60945!10410-106B5;0.511144!10054-101G9;0.535945!10758-110E2;0.401389!10711-109H9;0.934431!10040-101F4;0.75617!10470-106I2;0.285475!10415-106C1;0.279222!10198-103E9;0.226777!10614-108G2;0.239645!10612-108F9;0.603906!10549-107H9;0.452477!10615-108G3;0.722294!10487-107B1;0.712376!10433-106E1;0.0166304!10688-109F4;0.523261!10444-106F3;0.203212!10444-106F3;0.288829!10485-107A8;0.369077!10413-106B8;0.440365!10175-103C4;0.00251933!10161-103A8;0.18083!12131-128D7;0.47517!10624-108H3;0.700133!10712-109I1;0.0748723!10205-103F7;0.645751!10206-103F8;0.313247!10207-103F9;0.258322!10050-101G5;0.267263!10051-101G6;0.764259!10016-101C7;0.558151!10046-101G1;0.391208!10778-110G4;0.293443!10633-108I3;0.272464!10818-111B8;0.141818!10819-111B9;0.712382!10820-111C1;0.838794!10484-107A7;0.685796!10808-111A7;0.695634!10169-103B7;0.334115!10153-102I9;0.157978!13425-144D5;0.319453!13433-144E4;0.267853!13437-144E8;0.413442!11904-125F5;0.437587!11905-125F6;0.802842!10039-101F3;0.947125!10791-110H8;0.215816!10017-101C8;0.0263706!10045-101F9;0.107545!10509-107D5;0.283165!10839-111E2;0.780052!10692-109F8;0.345045!10079-102A7;0.825981!10078-102A6;0.360408!10721-110A1;0.639624!10569-108B2;0.111534!10570-108B3;0.993055!10571-108B4;0.689449!10647-109A8;0.925059!10752-110D5;0.800724!10782-110G8;0.28239!10726-110A6;0.0371973!10018-101C9;0.473017!10086-102B5;0.715686!10182-103D2;0.376364!10165-103B3;0.0774244!10499-107C4;0.38189!10408-106B3;0.417795!10019-101D1;0.0588069!10068-101I5;0.00769134!10075-102A3;0.0554821!10077-102A5;0.0105063!10727-110A7;0.045242!10775-110G1;0.319266!10412-106B7;0.844221!12231-129F8;0.988702!12232-129F9;0.103122!12233-129G1;0.0185013!12234-129G2;0.0860102!10414-106B9;0.0419001!10170-103B8;0.548561!10183-103D3;0.231551!10150-102I6;0.172322!10174-103C3;0.362745!10155-103A2;0.131007!10038-101F2;0.485399!10838-111E1;0.348656!10759-110E3;0.328489!10514-107E1;0.146625!10465-106H6;0.3055!10691-109F7;0.444597!10843-111E6;0.544238!10844-111E7;0.504989!11747-123G1;0.299114!11748-123G2;0.963072!11749-123G3;0.321243!11750-123G4;0.554532!11751-123G5;0.488777!11840-124H4;0.922042!11752-123G6;0.629861!11753-123G7;0.168988!11754-123G8;0.777496!11755-123G9;0.414435!11756-123H1;0.367591!11833-124G6;0.107078!11760-123H5;0.0208598!11836-124G9;0.188894!11758-123H3;0.892026!11835-124G8;0.309028!11762-123H7;0.323211!11838-124H2;0.719524!11757-123H2;0.983125!11759-123H4;0.596857!11761-123H6;0.109636!11842-124H6;0.368415!11837-124H1;0.207998!10568-108B1;0.67025!13230-141I8;0.42423!13231-141I9;0.902142!10696-109G3;0.676812!10493-107B7;0.0593651!10494-107B8;0.00626022!10850-111F4;0.300499!10851-111F5;0.526294!10852-111F6;0.769663!10853-111F7;0.369985!10854-111F8;0.0458709!10855-111F9;0.541072!10856-111G1;0.631816!10847-111F1;0.555296!10846-111E9;0.231432!10848-111F2;0.333005!10845-111E8;0.801922!10857-111G2;0.21267!10858-111G3;0.685237!10156-103A3;0.5089!11901-125F2;0.300217!11902-125F3;0.523419!11903-125F4;0.599875!10689-109F5;0.830114!10648-109A9;0.905522!10784-110H1;0.905081!10744-110C6;0.155711!10772-110F7;0.119974!10474-106I6;0.275319!10600-108E6;0.359042!10684-109E9;0.207276!12226-129F3;0.998545!12227-129F4;0.777312!10508-107D4;0.46279!10539-107G8;0.300283!10607-108F4;0.195483!10555-107I6;0.974957!10774-110F9;0.696997!10637-108I7;0.138288!10663-109C6;0.449771!10728-110A8;0.901623!10729-110A9;0.326943!10430-106D7;0.699791!10730-110B1;0.451422!10813-111B3;0.529912!10812-111B2;0.941553!10037-101F1;0.4938!10172-103C1;0.29405!10163-103B1;0.0507696!10076-102A4;0.434671!10073-102A1;0.270192!10036-101E9;0.176618!10195-103E6;0.201341!10277-104E7;0.300957!10434-106E2;0.276433!10550-107I1;0.988789!10545-107H5;0.975758!10544-107H4;0.188167!10704-109H2;0.632849!10510-107D6;0.214548!10558-107I9;0.359568!10020-101D2;0.27457!10732-110B3;0.136214!10049-101G4;0.956614!10698-109G5;0.352837!10437-106E5;0.627945!10417-106C3;0.39057!10035-101E8;0.431811!10171-103B9;0.221412!10157-103A4;0.13047!10034-101E7;0.357498!10072-101I9;0.278797!10199-103F1;0.157792!10200-103F2;0.869512!10697-109G4;0.587827!10723-110A3;0.123376!10179-103C8;0.729813!10160-103A7;0.460118!10180-103C9;0.783459!10162-103A9;0.847438!10021-101D3;0.713492!10840-111E3;0.0605741!10706-109H4;0.405914!10033-101E6;0.216556!10032-101E5;0.212684!10490-107B4;0.192808!10439-106E7;0.435279!10022-101D4;0.230513!10176-103C5;0.0982858!10469-106I1;0.190936!10067-101I4;0.11206!10411-106B6;0.532144!10471-106I3;0.0388699!10030-101E3;0.602585!10475-106I7;0.110722!10787-110H4;0.229346!10477-106I9;0.0788623!10695-109G2;0.996598!11771-123I7;0.497954!11772-123I8;0.548186!11773-123I9;0.2356!10093-102C3;0.199091!10442-106F1;0.966431!10442-106F1;0.000539896!10201-103F3;4.72918e-05!10639-108I9;0.0389014!11843-124H7;0.187337!11841-124H5;0.903822!10693-109F9;0.181753!10436-106E4;0.620771!10483-107A6;0.12792!10282-104F3;0.178917!10023-101D5;0.681466!10066-101I3;0.273372!10065-101I2;0.876621!10800-110I8;0.902267!10610-108F7;0.390475!10841-111E4;0.733985!10541-107H1;0.651182!10842-111E5;0.659124!10562-108A4;0.236608!10024-101D6;0.864152!10064-101I1;0.906284!10609-108F6;0.300493!10048-101G3;0.660343!10781-110G7;0.19525!10181-103D1;0.931593!10159-103A6;0.226812!10056-101H2;0.942702!10737-110B8;0.383597!10025-101D7;0.634009!10044-101F8;0.00998317!10424-106D1;0.0353935!10463-106H4;0.97229!10616-108G4;0.0530266!10486-107A9;0.0138395!10062-101H8;0.101771!10202-103F4;0.76562!10158-103A5;0.435432!10441-106E9;0.766374!10031-101E4;0.0396488!10063-101H9;0.193341!10063-101H9;0.125265!11763-123H8;0.924712!11765-123I1;0.382686!11768-123I4;0.168826!10807-111A6;0.948913!10790-110H7;0.554399!10798-110I6;0.146689!10786-110H3;0.834057!10591-108D6;0.75056!10593-108D8;0.241803!10590-108D5;0.564675!10026-101D8;0.723253!10096-102C6;0.055816!10168-103B6;0.923301!10154-103A1;0.155241!10209-103G2;0.386128!10061-101H7;0.404206!10027-101D9;0.60077!10043-101F7;0.218017!10783-110G9;0.018828!10028-101E1;0.516491!10060-101H6;0.016016!10203-103F5;0.258567!10059-101H5;0.540623!10047-101G2;0.878644!10029-101E2;0.298413!10058-101H4;0.286867!10418-106C4;0.669851!10492-107B6;0.294716!10694-109G1;0.223262!10797-110I5;0.12111!10057-101H3;0.268756!10100-102D1;0.559576!10055-101H1;0.122218!10204-103F6;0.919449!10191-103E2;0.0391264!10563-108A5;0.114602
|name=TEF
|name=TEF
|tomtom_result=fkh#MA0446.1;-1;7.32451e-05;0.0348647;0.0687835;11;ATGTTTATATAA;TGTTTGCTTAA;+!FOXL1#MA0033.1;-3;0.000417185;0.19858;0.131243;8;ATGTTTATATAA;TATACATA;+!slp1#MA0458.1;0;0.000419267;0.199571;0.131243;11;ATGTTTATATAA;TTGTTTACATT;+!NHP6A#MA0345.1;2;0.000770453;0.366736;0.18088;12;ATGTTTATATAA;TCATTTTTATATATAGGTCAT;-!NHP6B#MA0346.1;1;0.00104155;0.495776;0.19562;12;ATGTTTATATAA;TTTATTTATATATAATATGA;+!CG11617#MA0173.1;0;0.00142789;0.679677;0.223486;7;ATGTTTATATAA;ATGTTAA;-!Foxa2#MA0047.2;-1;0.00330229;1.57189;0.30974;11;ATGTTTATATAA;TGTTTACTTAGG;+!CIN5#MA0284.1;-2;0.00339683;1.61689;0.30974;10;ATGTTTATATAA;GATTACGTAA;-!FOXO3#MA0157.1;-1;0.00396601;1.88782;0.30974;8;ATGTTTATATAA;TGTTTACA;-!FOXD1#MA0031.1;0;0.00455461;2.168;0.30974;8;ATGTTTATATAA;ATGTTTAC;-!HCM1#MA0317.1;0;0.00487697;2.32144;0.30974;8;ATGTTTATATAA;TTGTTTAT;-!YAP6#MA0418.1;1;0.00525759;2.50261;0.30974;12;ATGTTTATATAA;GTCGCTTACGTAATCAGACC;-!mirr#MA0233.1;-1;0.0052773;2.51199;0.30974;5;ATGTTTATATAA;TGTTT;-!ara#MA0210.1;-1;0.00585589;2.7874;0.323482;5;ATGTTTATATAA;TGTTA;-!NFIL3#MA0025.1;-1;0.00792027;3.77005;0.413212;11;ATGTTTATATAA;ATGTTACATAA;-!YAP5#MA0417.1;0;0.00931784;4.43529;0.43574;6;ATGTTTATATAA;ATGCTT;-!Cf2_II#MA0015.1;-2;0.009723;4.62815;0.43574;10;ATGTTTATATAA;GTATATATAC;+!SMP1#MA0383.1;-1;0.0097441;4.63819;0.43574;11;ATGTTTATATAA;TGCTAATTTAATTATAGGTAA;-!SPT2#MA0387.1;-2;0.0112783;5.36848;0.447139;10;ATGTTTATATAA;AATTAAAGAA;+!FOXA1#MA0148.1;-1;0.0119036;5.66609;0.447139;11;ATGTTTATATAA;TGTTTACTTTG;+!FOXI1#MA0042.1;2;0.0136099;6.47832;0.481245;10;ATGTTTATATAA;GGATGTTTGTTT;+!SIG1#MA0379.1;-6;0.0150135;7.14642;0.503534;5;ATGTTTATATAA;ATATA;+!FKH2#MA0297.1;-1;0.0176603;8.40632;0.561251;7;ATGTTTATATAA;TGTTTAC;-!FKH1#MA0296.1;6;0.0179297;8.53454;0.561251;12;ATGTTTATATAA;TCCTCTTTGTTTACAATTCA;-!SRY#MA0084.1;1;0.0203927;9.70694;0.58804;8;ATGTTTATATAA;ATTGTTTAC;-!caup#MA0217.1;-1;0.0207636;9.88348;0.58804;5;ATGTTTATATAA;TGTTA;-
}}
}}

Latest revision as of 12:15, 7 September 2012

Full Name: TEF

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
fkh#MA0446.1-17.32451e-050.03486470.068783511ATGTTTATATAATGTTTGCTTAA+
FOXL1#MA0033.1-30.0004171850.198580.1312438ATGTTTATATAATATACATA+
slp1#MA0458.100.0004192670.1995710.13124311ATGTTTATATAATTGTTTACATT+
NHP6A#MA0345.120.0007704530.3667360.1808812ATGTTTATATAATCATTTTTATATATAGGTCAT-
NHP6B#MA0346.110.001041550.4957760.1956212ATGTTTATATAATTTATTTATATATAATATGA+
CG11617#MA0173.100.001427890.6796770.2234867ATGTTTATATAAATGTTAA-
Foxa2#MA0047.2-10.003302291.571890.3097411ATGTTTATATAATGTTTACTTAGG+
CIN5#MA0284.1-20.003396831.616890.3097410ATGTTTATATAAGATTACGTAA-
FOXO3#MA0157.1-10.003966011.887820.309748ATGTTTATATAATGTTTACA-
FOXD1#MA0031.100.004554612.1680.309748ATGTTTATATAAATGTTTAC-
HCM1#MA0317.100.004876972.321440.309748ATGTTTATATAATTGTTTAT-
YAP6#MA0418.110.005257592.502610.3097412ATGTTTATATAAGTCGCTTACGTAATCAGACC-
mirr#MA0233.1-10.00527732.511990.309745ATGTTTATATAATGTTT-
ara#MA0210.1-10.005855892.78740.3234825ATGTTTATATAATGTTA-
NFIL3#MA0025.1-10.007920273.770050.41321211ATGTTTATATAAATGTTACATAA-
YAP5#MA0417.100.009317844.435290.435746ATGTTTATATAAATGCTT-
Cf2_II#MA0015.1-20.0097234.628150.4357410ATGTTTATATAAGTATATATAC+
SMP1#MA0383.1-10.00974414.638190.4357411ATGTTTATATAATGCTAATTTAATTATAGGTAA-
SPT2#MA0387.1-20.01127835.368480.44713910ATGTTTATATAAAATTAAAGAA+
FOXA1#MA0148.1-10.01190365.666090.44713911ATGTTTATATAATGTTTACTTTG+
FOXI1#MA0042.120.01360996.478320.48124510ATGTTTATATAAGGATGTTTGTTT+
SIG1#MA0379.1-60.01501357.146420.5035345ATGTTTATATAAATATA+
FKH2#MA0297.1-10.01766038.406320.5612517ATGTTTATATAATGTTTAC-
FKH1#MA0296.160.01792978.534540.56125112ATGTTTATATAATCCTCTTTGTTTACAATTCA-
SRY#MA0084.110.02039279.706940.588048ATGTTTATATAAATTGTTTAC-
caup#MA0217.1-10.02076369.883480.588045ATGTTTATATAATGTTA-
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