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MacroAPE 1083:Motif378: Difference between revisions

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0534-107G3;0.506325!10429-106D6;0.935888!10464-106H5;0.656815!10827-111C8;0.859952!10789-110H6;0.823712!10828-111C9;0.692996!10788-110H5;0.880043!10792-110H9;0.963052!10765-110E9;0.594611!10829-111D1;0.90486!10830-111D2;0.746039!10831-111D3;0.709929!10832-111D4;0.509805!10833-111D5;0.74157!10764-110E8;0.991906!10770-110F5;0.309859!10399-106A3;0.547534!10400-106A4;0.919926!10405-106A9;0.872487!10834-111D6;0.864844!10835-111D7;0.582504!10836-111D8;0.679329!10837-111D9;0.804875!10699-109G6;0.42073!10802-111A1;0.649945!10796-110I4;0.880271!10010-101C1;0.927492!10810-111A9;0.654902!10421-106C7;0.500392!10708-109H6;0.631025!12235-129G3;0.359792!12236-129G4;0.552525!12237-129G5;0.785013!10167-103B5;0.504712!10151-102I7;0.183213!10428-106D5;0.143574!10795-110I3;0.955936!10805-111A4;0.678486!10052-101G7;0.967068!10189-103D9;0.897532!10589-108D4;0.303294!10425-106D2;0.664398!10427-106D4;0.973603!10702-109G9;0.881513!10432-106D9;0.949086!10496-107C1;0.838714!10718-109I7;0.574363!10011-101C2;0.760368!10053-101G8;0.53764!10686-109F2;0.378545!10084-102B3;0.216254!10012-101C3;0.286695!10085-102B4;0.240922!10482-107A5;0.406139!10419-106C5;0.0203234!10080-102A8;0.101443!10760-110E4;0.907689!10709-109H7;0.719263!10710-109H8;0.33886!10703-109H1;0.88535!10719-109I8;0.109667!10642-109A3;0.456623!10177-103C6;0.648001!10164-103B2;0.329423!10173-103C2;0.155257!10166-103B4;0.212166!10083-102B2;0.0893395!10188-103D8;0.273615!10552-107I3;0.258327!10553-107I4;0.276642!10013-101C4;0.318445!10536-107G5;0.836517!10618-108G6;0.802737!10423-106C9;0.765975!10785-110H2;0.623661!12238-129G6;0.979026!12239-129G7;0.887522!12240-129G8;0.933654!10416-106C2;0.99584!10801-110I9;0.621271!10766-110F1;0.61005!10824-111C5;0.869165!10825-111C6;0.431871!10826-111C7;0.497282!10454-106G4;0.571206!10409-106B4;0.516679!10638-108I8;0.707841!10636-108I6;0.157442!10513-107D9;0.761199!10420-106C6;0.400079!10082-102B1;0.561843!10014-101C5;0.830888!10070-101I7;0.687763!10452-106G2;0.711925!10453-106G3;0.753341!10449-106F8;0.997635!10042-101F6;0.944887!10069-101I6;0.35837!10193-103E4;0.169513!10631-108I1;0.282147!10438-106E6;0.941914!10488-107B2;0.383411!10196-103E7;0.326008!10071-101I8;0.10715!10071-101I8;0.466382!10041-101F5;0.356009!10451-106G1;0.7147!10450-106F9;0.663099!10604-108F1;0.890252!10605-108F2;0.585043!10606-108F3;0.232598!10603-108E9;0.648257!10497-107C2;0.952156!10448-106F7;0.652994!10643-109A4;0.0874786!10426-106D3;0.799378!10431-106D8;0.824157!10197-103E8;0.843481!10443-106F2;0.83202!10815-111B5;0.610787!10816-111B6;0.724345!10817-111B7;0.907212!10015-101C6;0.814884!10410-106B5;0.967791!10054-101G9;0.911276!10758-110E2;0.675035!10711-109H9;0.806385!10040-101F4;0.932142!10470-106I2;0.177398!10415-106C1;0.61256!10198-103E9;0.554941!10614-108G2;0.833685!10612-108F9;0.705752!10549-107H9;0.265714!10615-108G3;0.625177!10487-107B1;0.574143!10433-106E1;0.294067!10688-109F4;0.772732!10444-106F3;0.420908!10444-106F3;0.841201!10485-107A8;0.735083!10413-106B8;0.511429!10175-103C4;0.803342!10161-103A8;0.406287!12131-128D7;0.160934!10624-108H3;0.000524304!10712-109I1;0.656049!10205-103F7;0.669027!10206-103F8;0.847422!10207-103F9;0.727871!10050-101G5;0.482352!10051-101G6;0.789992!10016-101C7;0.701068!10046-101G1;0.679978!10778-110G4;0.694591!10633-108I3;0.908817!10818-111B8;0.069932!10819-111B9;0.13948!10820-111C1;0.107087!10484-107A7;0.124865!10808-111A7;0.75607!10169-103B7;0.882196!10153-102I9;0.270507!13425-144D5;0.182619!13433-144E4;0.489297!13437-144E8;0.651525!11904-125F5;0.277645!11905-125F6;0.0225127!10039-101F3;0.102377!10791-110H8;0.191666!10017-101C8;0.445014!10045-101F9;0.88483!10509-107D5;0.95361!10839-111E2;0.531762!10692-109F8;0.30541!10079-102A7;0.821729!10078-102A6;0.728384!10721-110A1;0.585509!10569-108B2;0.166246!10570-108B3;0.119736!10571-108B4;0.0579077!10647-109A8;0.178969!10752-110D5;0.894563!10782-110G8;0.725538!10726-110A6;0.991062!10018-101C9;0.749375!10086-102B5;0.585376!10182-103D2;0.132323!10165-103B3;0.370774!10499-107C4;0.247485!10408-106B3;0.532515!10019-101D1;0.540816!10068-101I5;0.944658!10075-102A3;0.734878!10077-102A5;0.953878!10727-110A7;0.590988!10775-110G1;0.915231!10412-106B7;0.890446!12231-129F8;0.251011!12232-129F9;0.218337!12233-129G1;0.392792!12234-129G2;0.22282!10414-106B9;0.069546!10170-103B8;0.0327999!10183-103D3;0.231302!10150-102I6;0.267859!10174-103C3;0.118788!10155-103A2;0.834059!10038-101F2;0.253781!10838-111E1;0.450702!10759-110E3;0.495824!10514-107E1;0.352282!10465-106H6;0.90802!10691-109F7;0.531657!10843-111E6;0.855632!10844-111E7;0.611502!11747-123G1;0.905108!11748-123G2;0.156191!11749-123G3;0.621687!11750-123G4;0.19697!11751-123G5;0.150123!11840-124H4;0.213412!11752-123G6;0.0752859!11753-123G7;0.622058!11754-123G8;0.422499!11755-123G9;0.0952028!11756-123H1;0.743586!11833-124G6;0.624248!11760-123H5;0.312771!11836-124G9;0.31129!11758-123H3;0.113944!11835-124G8;0.368687!11762-123H7;0.21111!11838-124H2;0.325191!11757-123H2;0.61198!11759-123H4;0.257624!11761-123H6;0.792921!11842-124H6;0.253719!11837-124H1;0.314434!10568-108B1;0.571822!13230-141I8;0.000546946!13231-141I9;0.00331374!10696-109G3;0.00676353!10493-107B7;0.705649!10494-107B8;0.780607!10850-111F4;0.425283!10851-111F5;0.00956706!10852-111F6;0.621479!10853-111F7;0.223639!10854-111F8;0.00346403!10855-111F9;0.131781!10856-111G1;0.280458!10847-111F1;0.402837!10846-111E9;0.676024!10848-111F2;0.95129!10845-111E8;0.34866!10857-111G2;0.806121!10858-111G3;0.00586253!10156-103A3;0.159346!11901-125F2;0.130479!11902-125F3;0.104989!11903-125F4;0.1612!10689-109F5;0.26157!10648-109A9;0.0226963!10784-110H1;0.138333!10744-110C6;0.202062!10772-110F7;0.84555!10474-106I6;0.55495!10600-108E6;0.728275!10684-109E9;0.856943!12226-129F3;0.861208!12227-129F4;0.92989!10508-107D4;0.41433!10539-107G8;0.549969!10607-108F4;0.772072!10555-107I6;0.819619!10774-110F9;0.984579!10637-108I7;0.400479!10663-109C6;0.909975!10728-110A8;0.27531!10729-110A9;0.505992!10430-106D7;0.951162!10730-110B1;0.139776!10813-111B3;0.929577!10812-111B2;0.446757!10037-101F1;0.334844!10172-103C1;0.19775!10163-103B1;0.228303!10076-102A4;0.117892!10073-102A1;0.226403!10036-101E9;0.348868!10195-103E6;0.237542!10277-104E7;0.215654!10434-106E2;0.277657!10550-107I1;0.142123!10545-107H5;0.828417!10544-107H4;0.933994!10704-109H2;0.21127!10510-107D6;0.80714!10558-107I9;0.0399415!10020-101D2;0.430561!10732-110B3;0.970968!10049-101G4;0.239092!10698-109G5;0.820528!10437-106E5;0.766401!10417-106C3;0.0306406!10035-101E8;0.90457!10171-103B9;0.175285!10157-103A4;0.221324!10034-101E7;0.122734!10072-101I9;0.189775!10199-103F1;0.338454!10200-103F2;0.665927!10697-109G4;0.84704!10723-110A3;0.907976!10179-103C8;0.248108!10160-103A7;0.276333!10180-103C9;0.117576!10162-103A9;0.421959!10021-101D3;0.0586915!10840-111E3;0.882799!10706-109H4;0.793154!10033-101E6;0.565867!10032-101E5;0.227838!10490-107B4;0.236198!10439-106E7;0.251093!10022-101D4;0.77324!10176-103C5;0.672066!10469-106I1;0.183699!10067-101I4;0.636737!10411-106B6;0.788577!10471-106I3;0.926491!10030-101E3;0.0630042!10475-106I7;0.801961!10787-110H4;0.982775!10477-106I9;0.728848!10695-109G2;0.933574!11771-123I7;0.360753!11772-123I8;0.354632!11773-123I9;0.36151!10093-102C3;0.143582!10442-106F1;0.419249!10442-106F1;0.438827!10201-103F3;0.569178!10639-108I9;0.17271!11843-124H7;0.262133!11841-124H5;0.392264!10693-109F9;0.00766747!10436-106E4;0.727806!10483-107A6;0.739959!10282-104F3;0.983475!10023-101D5;0.502527!10066-101I3;0.924703!10065-101I2;0.0576623!10800-110I8;0.524182!10610-108F7;0.493983!10841-111E4;0.817753!10541-107H1;0.79339!10842-111E5;0.30428!10562-108A4;0.843917!10024-101D6;0.919545!10064-101I1;0.541855!10609-108F6;0.156696!10048-101G3;0.562755!10781-110G7;0.298393!10181-103D1;0.0795107!10159-103A6;0.73423!10056-101H2;0.202215!10737-110B8;0.914917!10025-101D7;0.767468!10044-101F8;0.418974!10424-106D1;0.604827!10463-106H4;0.817386!10616-108G4;0.387935!10486-107A9;0.327474!10062-101H8;0.520112!10202-103F4;0.671097!10158-103A5;0.612031!10441-106E9;0.232247!10031-101E4;0.724038!10063-101H9;0.291467!10063-101H9;0.302061!11763-123H8;0.295153!11765-123I1;0.137287!11768-123I4;0.391011!10807-111A6;0.161264!10790-110H7;0.410485!10798-110I6;0.784626!10786-110H3;0.0607305!10591-108D6;0.558584!10593-108D8;0.959984!10590-108D5;0.103975!10026-101D8;0.709074!10096-102C6;0.555898!10168-103B6;0.807277!10154-103A1;0.36007!10209-103G2;0.183875!10061-101H7;0.512809!10027-101D9;0.522368!10043-101F7;0.367244!10783-110G9;0.106899!10028-101E1;0.138706!10060-101H6;0.539076!10203-103F5;0.514182!10059-101H5;0.608488!10047-101G2;0.176283!10029-101E2;0.805931!10058-101H4;0.951344!10418-106C4;0.608179!10492-107B6;0.634288!10694-109G1;0.288448!10797-110I5;0.276524!10057-101H3;0.372948!10100-102D1;0.194155!10055-101H1;0.49665!10204-103F6;0.669675!10191-103E2;0.384051!10563-108A5;0.755196
|name=motif378
|name=motif378
|tomtom_result=SP1#MA0079.2;0;1.26695e-05;0.00603066;0.0120296;8;GGGGGAGG;GGGGGCGGGG;-!btd#MA0443.1;1;0.00065997;0.314146;0.313319;8;GGGGGAGG;AGGGGGCGGA;+!MZF1_1-4#MA0056.1;0;0.00220675;1.05041;0.603544;6;GGGGGAGG;TGGGGA;+!CHA4#MA0283.1;0;0.00274154;1.30497;0.603544;8;GGGGGAGG;GGCGGAGA;+!SP1#MA0079.2;0;0.00317824;1.51284;0.603544;8;GGGGGAGG;GGGGCGGGGT;+!RXR::RAR_DR5#MA0159.1;6;0.00516248;2.45734;0.697668;8;GGGGGAGG;AGGTCATGGAGAGGTCA;+!MZF1_5-13#MA0057.1;3;0.00641838;3.05515;0.697668;7;GGGGGAGG;GGAGGGGGAA;+!Egr1#MA0162.1;3;0.00686622;3.26832;0.697668;8;GGGGGAGG;TGCGTGGGCGT;+!abi4#MA0123.1;0;0.00748363;3.56221;0.697668;8;GGGGGAGG;GGGGGCACCG;-!RREB1#MA0073.1;5;0.00787142;3.7468;0.697668;8;GGGGGAGG;TGGGGGGGGGTGGTTTGGGG;-!Klf4#MA0039.2;1;0.00808256;3.8473;0.697668;8;GGGGGAGG;TGGGTGGGGC;+!Klf4#MA0039.2;2;0.00978932;4.65972;0.774576;8;GGGGGAGG;TAAAGGAAGG;+!MSN2#MA0341.1;0;0.0110711;5.26983;0.798313;5;GGGGGAGG;AGGGG;+!USV1#MA0413.1;10;0.0117709;5.60293;0.798313;8;GGGGGAGG;CACAAATTCAGGGGGAATTT;-!Pax4#MA0068.1;0;0.0137672;6.55317;0.822768;8;GGGGGAGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!opa#MA0456.1;2;0.0142857;6.79999;0.822768;8;GGGGGAGG;CAGCGGGGGGTC;-!CTCF#MA0139.1;9;0.0154505;7.35445;0.822768;8;GGGGGAGG;TGGCCACCAGGGGGCGCTA;+!YGR067C#MA0425.1;3;0.0155976;7.42445;0.822768;8;GGGGGAGG;TGAAAAAGTGGGGT;-!RPN4#MA0373.1;0;0.0184831;8.79797;0.923665;7;GGGGGAGG;GGTGGCG;+!INSM1#MA0155.1;5;0.0206347;9.82213;0.979628;7;GGGGGAGG;TGTCAGGGGGCG;+
}}
}}

Latest revision as of 12:27, 7 September 2012

Full Name: motif378

Motif matrix
POACGT
01728422611557776877
021084049621482968101
03384341654810188015337
0420539589913257513186
05656361851572672184
0614715810101284912091
0729586291665682044
08301222791650491859

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.201.26695e-050.006030660.01202968GGGGGAGGGGGGGCGGGG-
btd#MA0443.110.000659970.3141460.3133198GGGGGAGGAGGGGGCGGA+
MZF1_1-4#MA0056.100.002206751.050410.6035446GGGGGAGGTGGGGA+
CHA4#MA0283.100.002741541.304970.6035448GGGGGAGGGGCGGAGA+
SP1#MA0079.200.003178241.512840.6035448GGGGGAGGGGGGCGGGGT+
RXR::RAR_DR5#MA0159.160.005162482.457340.6976688GGGGGAGGAGGTCATGGAGAGGTCA+
MZF1_5-13#MA0057.130.006418383.055150.6976687GGGGGAGGGGAGGGGGAA+
Egr1#MA0162.130.006866223.268320.6976688GGGGGAGGTGCGTGGGCGT+
abi4#MA0123.100.007483633.562210.6976688GGGGGAGGGGGGGCACCG-
RREB1#MA0073.150.007871423.74680.6976688GGGGGAGGTGGGGGGGGGTGGTTTGGGG-
Klf4#MA0039.210.008082563.84730.6976688GGGGGAGGTGGGTGGGGC+
Klf4#MA0039.220.009789324.659720.7745768GGGGGAGGTAAAGGAAGG+
MSN2#MA0341.100.01107115.269830.7983135GGGGGAGGAGGGG+
USV1#MA0413.1100.01177095.602930.7983138GGGGGAGGCACAAATTCAGGGGGAATTT-
Pax4#MA0068.100.01376726.553170.8227688GGGGGAGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
opa#MA0456.120.01428576.799990.8227688GGGGGAGGCAGCGGGGGGTC-
CTCF#MA0139.190.01545057.354450.8227688GGGGGAGGTGGCCACCAGGGGGCGCTA+
YGR067C#MA0425.130.01559767.424450.8227688GGGGGAGGTGAAAAAGTGGGGT-
RPN4#MA0373.100.01848318.797970.9236657GGGGGAGGGGTGGCG+
INSM1#MA0155.150.02063479.822130.9796287GGGGGAGGTGTCAGGGGGCG+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif378&oldid=2133656"