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MacroAPE 1083:Motif943: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;137889;0;0!02;0;21382;5223;111284!03;5331;75793;14014;42751!04;0;0;0;137889!05;0;0;0;137889!06;0;137889;0;0!07;13629;84923;3954;35383 |m...")
 
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14594!11600-120H7;0.937069!11681-122H7;0.47986!11216-116B1;0.381379!12179-129A1;0.342432!12180-129A2;0.0403808!12181-129A3;0.0425946!12176-128I7;0.138933!12177-128I8;0.0572515!12182-129A4;0.0568866!12183-129A5;0.0320453!12184-129A6;0.0391748!10809-111A8;0.0736776!10597-108E3;0.391548!10717-109I6;0.318858!10455-106G5;0.3973!10534-107G3;0.000423978!10429-106D6;0.000361556!10464-106H5;0.00318585!10827-111C8;0.000246604!10789-110H6;7.48174e-08!10828-111C9;1.42986e-05!10788-110H5;0.000240349!10792-110H9;6.61991e-10!10765-110E9;4.73423e-08!10829-111D1;3.84214e-06!10830-111D2;9.33733e-06!10831-111D3;5.7667e-05!10832-111D4;5.53159e-06!10833-111D5;0.000256685!10764-110E8;0.000415494!10770-110F5;0.00143269!10399-106A3;2.05915e-08!10400-106A4;2.24565e-06!10405-106A9;3.52015e-07!10834-111D6;8.15186e-07!10835-111D7;7.30162e-06!10836-111D8;0.00128493!10837-111D9;0.00692238!10699-109G6;0.000256932!10802-111A1;8.94644e-08!10796-110I4;2.26569e-05!10010-101C1;0.0223903!10810-111A9;0.274002!10421-106C7;0.0599242!10708-109H6;2.33276e-08!12235-129G3;0.0544948!12236-129G4;0.225686!12237-129G5;0.0334951!10167-103B5;0.368787!10151-102I7;0.0155332!10428-106D5;0.00423363!10795-110I3;0.104723!10805-111A4;6.68631e-05!10052-101G7;0.675554!10189-103D9;0.00125203!10589-108D4;0.0566345!10425-106D2;0.723278!10427-106D4;0.324027!10702-109G9;0.0204031!10432-106D9;0.0744958!10496-107C1;0.0144402!10718-109I7;0.0965764!10011-101C2;6.69453e-07!10053-101G8;0.0134331!10686-109F2;0.0730295!10084-102B3;0.881812!10012-101C3;0.00225438!10085-102B4;0.00439193!10482-107A5;0.00237961!10419-106C5;0.109336!10080-102A8;0.0754987!10760-110E4;0.231835!10709-109H7;0.00930959!10710-109H8;0.0542624!10703-109H1;0.0144485!10719-109I8;0.400305!10642-109A3;0.872062!10177-103C6;0.0819031!10164-103B2;0.00603843!10173-103C2;0.00649752!10166-103B4;0.0115955!10083-102B2;0.00487341!10188-103D8;0.00235188!10552-107I3;0.00463873!10553-107I4;0.0135857!10013-101C4;0.649373!10536-107G5;0.00517137!10618-108G6;0.704912!10423-106C9;0.191139!10785-110H2;0.163007!12238-129G6;0.861243!12239-129G7;0.274842!12240-129G8;0.0858681!10416-106C2;0.618876!10801-110I9;0.00163978!10766-110F1;6.33598e-09!10824-111C5;2.69757e-05!10825-111C6;0.00366081!10826-111C7;0.00300902!10454-106G4;0.00155375!10409-106B4;0.0235259!10638-108I8;0.000132614!10636-108I6;0.0131869!10513-107D9;0.23341!10420-106C6;0.158814!10082-102B1;0.852189!10014-101C5;0.00724643!10070-101I7;0.0018721!10452-106G2;6.1952e-05!10453-106G3;0.00587886!10449-106F8;0.00238307!10042-101F6;0.0025782!10069-101I6;7.98571e-05!10193-103E4;0.000196739!10631-108I1;0.0032714!10438-106E6;0.00234245!10488-107B2;0.20046!10196-103E7;0.0271019!10071-101I8;0.0317268!10071-101I8;3.19228e-05!10041-101F5;0.00317673!10451-106G1;0.0432857!10450-106F9;0.227157!10604-108F1;0.462239!10605-108F2;0.273226!10606-108F3;0.0689252!10603-108E9;0.245581!10497-107C2;0.158518!10448-106F7;0.533947!10643-109A4;0.0248301!10426-106D3;0.0608445!10431-106D8;0.0786854!10197-103E8;0.0191081!10443-106F2;0.00327438!10815-111B5;0.71991!10816-111B6;0.140235!10817-111B7;0.136082!10015-101C6;0.147779!10410-106B5;0.031005!10054-101G9;0.11574!10758-110E2;7.16483e-05!10711-109H9;3.89134e-05!10040-101F4;2.52639e-06!10470-106I2;0.00782092!10415-106C1;0.590175!10198-103E9;0.0402981!10614-108G2;0.0198194!10612-108F9;0.809797!10549-107H9;0.244066!10615-108G3;0.175469!10487-107B1;0.34653!10433-106E1;0.00169168!10688-109F4;0.0142941!10444-106F3;0.157248!10444-106F3;0.625095!10485-107A8;0.555741!10413-106B8;0.0556106!10175-103C4;0.469037!10161-103A8;0.00148111!12131-128D7;0.00016555!10624-108H3;0.25541!10712-109I1;0.000274622!10205-103F7;0.00913245!10206-103F8;0.0010934!10207-103F9;0.00385166!10050-101G5;0.532291!10051-101G6;0.0666158!10016-101C7;0.0495534!10046-101G1;0.200428!10778-110G4;0.000493002!10633-108I3;0.0131402!10818-111B8;0.540971!10819-111B9;0.032846!10820-111C1;0.0278612!10484-107A7;0.0373737!10808-111A7;0.701185!10169-103B7;5.54387e-05!10153-102I9;0.0104835!13425-144D5;0.00328477!13433-144E4;0.523608!13437-144E8;0.386384!11904-125F5;0.682374!11905-125F6;0.0315898!10039-101F3;0.173065!10791-110H8;0.00666413!10017-101C8;0.00844597!10045-101F9;0.0982314!10509-107D5;2.29066e-06!10839-111E2;0.057347!10692-109F8;0.0995188!10079-102A7;0.360742!10078-102A6;0.0312585!10721-110A1;0.308367!10569-108B2;0.107906!10570-108B3;0.340645!10571-108B4;0.44855!10647-109A8;0.573768!10752-110D5;0.805359!10782-110G8;2.90839e-05!10726-110A6;0.8283!10018-101C9;0.237093!10086-102B5;0.0640333!10182-103D2;0.832452!10165-103B3;0.000468697!10499-107C4;0.000845836!10408-106B3;0.0537467!10019-101D1;0.185515!10068-101I5;0.0748293!10075-102A3;0.00460879!10077-102A5;0.192386!10727-110A7;0.383533!10775-110G1;8.31973e-06!10412-106B7;0.000597865!12231-129F8;0.303714!12232-129F9;0.389347!12233-129G1;0.247901!12234-129G2;0.308571!10414-106B9;0.405523!10170-103B8;0.237525!10183-103D3;0.0274903!10150-102I6;0.0147311!10174-103C3;0.00656775!10155-103A2;0.000789318!10038-101F2;0.000372982!10838-111E1;0.00039097!10759-110E3;0.236242!10514-107E1;0.266359!10465-106H6;0.00842848!10691-109F7;0.116512!10843-111E6;0.102538!10844-111E7;0.79253!11747-123G1;0.153963!11748-123G2;0.746896!11749-123G3;0.222334!11750-123G4;0.941817!11751-123G5;0.462574!11840-124H4;0.348296!11752-123G6;0.762137!11753-123G7;0.702532!11754-123G8;0.0428898!11755-123G9;0.854974!11756-123H1;0.0430642!11833-124G6;0.777201!11760-123H5;0.629499!11836-124G9;0.36984!11758-123H3;0.097404!11835-124G8;0.15743!11762-123H7;0.00954725!11838-124H2;0.126517!11757-123H2;0.0394513!11759-123H4;0.742122!11761-123H6;0.435025!11842-124H6;0.082241!11837-124H1;0.16275!10568-108B1;0.0011611!13230-141I8;0.82367!13231-141I9;0.303679!10696-109G3;0.292186!10493-107B7;0.00712877!10494-107B8;0.0881985!10850-111F4;0.924473!10851-111F5;0.368505!10852-111F6;0.632127!10853-111F7;0.557391!10854-111F8;0.270501!10855-111F9;0.549056!10856-111G1;0.188572!10847-111F1;0.701464!10846-111E9;0.566051!10848-111F2;0.290608!10845-111E8;0.0407767!10857-111G2;0.148737!10858-111G3;0.169439!10156-103A3;0.189693!11901-125F2;0.00599878!11902-125F3;0.0970611!11903-125F4;0.104028!10689-109F5;0.103352!10648-109A9;0.651099!10784-110H1;0.630444!10744-110C6;0.000441124!10772-110F7;0.000751909!10474-106I6;4.20998e-07!10600-108E6;2.90412e-10!10684-109E9;0.814793!12226-129F3;0.000193166!12227-129F4;0.0080327!10508-107D4;0.00323714!10539-107G8;0.13247!10607-108F4;0.481189!10555-107I6;0.888489!10774-110F9;0.23246!10637-108I7;0.441826!10663-109C6;0.430988!10728-110A8;0.655105!10729-110A9;0.73365!10430-106D7;0.0190379!10730-110B1;7.06864e-06!10813-111B3;0.487114!10812-111B2;0.0087257!10037-101F1;0.1932!10172-103C1;0.00478466!10163-103B1;0.0186916!10076-102A4;0.00424434!10073-102A1;0.00493767!10036-101E9;0.00558885!10195-103E6;0.00310812!10277-104E7;0.00629765!10434-106E2;1.30885e-06!10550-107I1;0.0832052!10545-107H5;0.220266!10544-107H4;0.0242868!10704-109H2;0.513225!10510-107D6;0.329589!10558-107I9;0.532263!10020-101D2;0.749225!10732-110B3;0.000779902!10049-101G4;0.765879!10698-109G5;0.426668!10437-106E5;0.0807433!10417-106C3;0.254261!10035-101E8;0.154139!10171-103B9;0.00578502!10157-103A4;0.0160213!10034-101E7;0.00661799!10072-101I9;0.00511908!10199-103F1;0.00758!10200-103F2;0.718139!10697-109G4;0.00346816!10723-110A3;0.65983!10179-103C8;0.979665!10160-103A7;0.0110236!10180-103C9;0.0151167!10162-103A9;0.0899946!10021-101D3;0.0406629!10840-111E3;0.515216!10706-109H4;0.000463742!10033-101E6;0.504871!10032-101E5;0.00187333!10490-107B4;0.00394666!10439-106E7;0.12184!10022-101D4;0.180028!10176-103C5;0.00967336!10469-106I1;0.011549!10067-101I4;0.195132!10411-106B6;1.8347e-06!10471-106I3;0.93878!10030-101E3;0.233124!10475-106I7;0.000892258!10787-110H4;0.723141!10477-106I9;0.182513!10695-109G2;0.583066!11771-123I7;0.00294311!11772-123I8;0.444047!11773-123I9;0.851167!10093-102C3;0.284536!10442-106F1;0.462728!10442-106F1;0.0166167!10201-103F3;0.0156517!10639-108I9;0.0227862!11843-124H7;0.215663!11841-124H5;0.717772!10693-109F9;0.00296749!10436-106E4;0.77687!10483-107A6;0.0326652!10282-104F3;0.196162!10023-101D5;0.730453!10066-101I3;0.301646!10065-101I2;0.000394516!10800-110I8;0.000431918!10610-108F7;0.991935!10841-111E4;0.164436!10541-107H1;0.540707!10842-111E5;0.555154!10562-108A4;0.112067!10024-101D6;0.00283479!10064-101I1;0.0102912!10609-108F6;2.51933e-05!10048-101G3;0.343673!10781-110G7;0.0072028!10181-103D1;0.962962!10159-103A6;0.000690526!10056-101H2;0.00222606!10737-110B8;3.19745e-05!10025-101D7;0.0473025!10044-101F8;0.510041!10424-106D1;0.385312!10463-106H4;7.51901e-05!10616-108G4;0.0380621!10486-107A9;0.00419501!10062-101H8;0.00432783!10202-103F4;0.0095199!10158-103A5;0.237536!10441-106E9;1.67767e-05!10031-101E4;0.763012!10063-101H9;0.00329617!10063-101H9;0.00468047!11763-123H8;4.17413e-05!11765-123I1;0.038588!11768-123I4;0.0480097!10807-111A6;0.110228!10790-110H7;0.88511!10798-110I6;0.892248!10786-110H3;0.737137!10591-108D6;0.313523!10593-108D8;0.34742!10590-108D5;0.314207!10026-101D8;0.670687!10096-102C6;4.1858e-05!10168-103B6;0.00730967!10154-103A1;0.00120818!10209-103G2;0.000714948!10061-101H7;0.00598805!10027-101D9;2.24956e-06!10043-101F7;0.30965!10783-110G9;0.218838!10028-101E1;0.443586!10060-101H6;0.0290655!10203-103F5;6.34234e-05!10059-101H5;0.0252467!10047-101G2;0.000641261!10029-101E2;0.371331!10058-101H4;0.136535!10418-106C4;3.9683e-05!10492-107B6;0.497207!10694-109G1;0.0488252!10797-110I5;0.136625!10057-101H3;0.0378228!10100-102D1;0.00791123!10055-101H1;0.0216858!10204-103F6;9.36663e-05!10191-103E2;0.0596614!10563-108A5;0.0716918
|name=motif943
|name=motif943
|tomtom_result=GABPA#MA0062.2;0;0.000310915;0.147996;0.295991;7;CTCTTCC;CTCTTCCGGT;-!STAT1#MA0137.2;0;0.00392897;1.87019;1;7;CTCTTCC;CATTTCCCGGAAACC;+!NFATC2#MA0152.1;-1;0.00527966;2.51312;1;6;CTCTTCC;TTTTCCA;+!GABPA#MA0062.2;2;0.00645496;3.07256;1;7;CTCTTCC;GCCACTTCCGG;-!Klf4#MA0039.1;0;0.00907335;4.31892;1;7;CTCTTCC;CCTTCCTTTA;-!SPI1#MA0080.1;-2;0.00908475;4.32434;1;5;CTCTTCC;CTTCCG;-!CUP2#MA0287.1;0;0.0116616;5.55092;1;7;CTCTTCC;CATTTCTGCTG;-!HSF1#MA0319.1;-1;0.0125871;5.99144;1;6;CTCTTCC;TGTTCCAT;-!Eip74EF#MA0026.1;-2;0.0151157;7.19506;1;5;CTCTTCC;CTTCCGG;-!ETS1#MA0098.1;-2;0.0152223;7.24581;1;5;CTCTTCC;CTTCCG;+!EDS1#MA0294.1;1;0.015911;7.57362;1;7;CTCTTCC;ATTTTTCCG;-!PPARG::RXRA#MA0065.2;4;0.0172296;8.2013;1;7;CTCTTCC;TGACCTTTGCCCTAC;-
}}
}}

Latest revision as of 12:35, 7 September 2012

Full Name: motif943

Motif matrix
POACGT
01013788900
020213825223111284
035331757931401442751
04000137889
05000137889
06013788900
071362984923395435383

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GABPA#MA0062.200.0003109150.1479960.2959917CTCTTCCCTCTTCCGGT-
STAT1#MA0137.200.003928971.8701917CTCTTCCCATTTCCCGGAAACC+
NFATC2#MA0152.1-10.005279662.5131216CTCTTCCTTTTCCA+
GABPA#MA0062.220.006454963.0725617CTCTTCCGCCACTTCCGG-
Klf4#MA0039.100.009073354.3189217CTCTTCCCCTTCCTTTA-
SPI1#MA0080.1-20.009084754.3243415CTCTTCCCTTCCG-
CUP2#MA0287.100.01166165.5509217CTCTTCCCATTTCTGCTG-
HSF1#MA0319.1-10.01258715.9914416CTCTTCCTGTTCCAT-
Eip74EF#MA0026.1-20.01511577.1950615CTCTTCCCTTCCGG-
ETS1#MA0098.1-20.01522237.2458115CTCTTCCCTTCCG+
EDS1#MA0294.110.0159117.5736217CTCTTCCATTTTTCCG-
PPARG::RXRA#MA0065.240.01722968.201317CTCTTCCTGACCTTTGCCCTAC-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif943&oldid=2133703"