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MacroAPE 1083:CTSTTTCTTTAAG,motif929: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.656;914.112;220.248;519.984!2;361.008;1.656;132.48;1160.856!3;1.656;730.296;922.392;1.656!4;1.656;1.656;1.656;1651.032!5;1.656;125.856;616...")
 
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G5;0.0661548!10534-107G3;0.0194149!10429-106D6;0.0015259!10464-106H5;0.0324752!10827-111C8;0.281981!10789-110H6;0.139601!10828-111C9;0.209474!10788-110H5;0.060486!10792-110H9;0.26056!10765-110E9;0.0546377!10829-111D1;0.645566!10830-111D2;0.00136429!10831-111D3;0.608205!10832-111D4;0.237282!10833-111D5;0.0505276!10764-110E8;0.0126666!10770-110F5;0.0599783!10399-106A3;0.0255277!10400-106A4;0.00947769!10405-106A9;0.0104855!10834-111D6;0.0190293!10835-111D7;0.0123614!10836-111D8;0.0438007!10837-111D9;0.0282645!10699-109G6;0.414654!10802-111A1;0.00347764!10796-110I4;0.107202!10010-101C1;0.620029!10810-111A9;0.0631352!10421-106C7;0.117052!10708-109H6;0.00926892!12235-129G3;0.0743532!12236-129G4;0.777642!12237-129G5;0.0689858!10167-103B5;0.271659!10151-102I7;0.481685!10428-106D5;0.619733!10795-110I3;0.00186014!10805-111A4;0.24305!10052-101G7;0.012071!10189-103D9;0.0139521!10589-108D4;0.10344!10425-106D2;0.218749!10427-106D4;0.207329!10702-109G9;0.347164!10432-106D9;0.246477!10496-107C1;0.980454!10718-109I7;0.0494327!10011-101C2;0.20946!10053-101G8;0.371207!10686-109F2;0.285324!10084-102B3;0.360851!10012-101C3;0.243289!10085-102B4;0.755633!10482-107A5;0.458528!10419-106C5;0.0719369!10080-102A8;0.522938!10760-110E4;0.251286!10709-109H7;0.674817!10710-109H8;0.934705!10703-109H1;0.0703191!10719-109I8;0.122204!10642-109A3;0.0499452!10177-103C6;0.190934!10164-103B2;0.866233!10173-103C2;0.828296!10166-103B4;0.836417!10083-102B2;0.61807!10188-103D8;0.773296!10552-107I3;0.811418!10553-107I4;0.0945612!10013-101C4;0.479416!10536-107G5;0.17188!10618-108G6;0.0692535!10423-106C9;0.140571!10785-110H2;0.643253!12238-129G6;0.190667!12239-129G7;0.575612!12240-129G8;0.529575!10416-106C2;0.811414!10801-110I9;0.0129347!10766-110F1;0.489452!10824-111C5;0.148313!10825-111C6;0.00366778!10826-111C7;0.037069!10454-106G4;0.00974408!10409-106B4;0.0118534!10638-108I8;0.12935!10636-108I6;0.364762!10513-107D9;0.0742926!10420-106C6;0.0669342!10082-102B1;0.6929!10014-101C5;0.0597869!10070-101I7;0.595544!10452-106G2;0.430377!10453-106G3;0.0779455!10449-106F8;0.010334!10042-101F6;0.00317968!10069-101I6;0.0784998!10193-103E4;0.0694634!10631-108I1;0.668053!10438-106E6;0.0675467!10488-107B2;0.622258!10196-103E7;0.0903452!10071-101I8;0.227192!10071-101I8;0.185527!10041-101F5;0.504104!10451-106G1;0.183954!10450-106F9;0.172787!10604-108F1;0.213297!10605-108F2;0.390292!10606-108F3;0.430919!10603-108E9;0.350359!10497-107C2;0.125292!10448-106F7;0.0751725!10643-109A4;0.928046!10426-106D3;0.365777!10431-106D8;0.626634!10197-103E8;0.401154!10443-106F2;0.618568!10815-111B5;0.00647974!10816-111B6;0.916219!10817-111B7;0.963877!10015-101C6;0.789377!10410-106B5;0.01472!10054-101G9;0.0581996!10758-110E2;0.404062!10711-109H9;0.492226!10040-101F4;0.0277569!10470-106I2;0.830502!10415-106C1;0.122715!10198-103E9;0.423694!10614-108G2;0.00578297!10612-108F9;0.987832!10549-107H9;0.721032!10615-108G3;0.260974!10487-107B1;0.292184!10433-106E1;0.155488!10688-109F4;0.992981!10444-106F3;0.234152!10444-106F3;0.530881!10485-107A8;0.592097!10413-106B8;0.243849!10175-103C4;0.47489!10161-103A8;0.764634!12131-128D7;0.407368!10624-108H3;0.6987!10712-109I1;0.000736769!10205-103F7;0.058485!10206-103F8;0.163063!10207-103F9;0.142186!10050-101G5;0.271158!10051-101G6;0.44456!10016-101C7;0.102246!10046-101G1;0.263304!10778-110G4;0.0801541!10633-108I3;0.165133!10818-111B8;0.0614006!10819-111B9;0.0646625!10820-111C1;0.0588533!10484-107A7;0.0509569!10808-111A7;0.173484!10169-103B7;0.0116883!10153-102I9;0.982886!13425-144D5;0.276091!13433-144E4;0.527883!13437-144E8;0.296223!11904-125F5;0.105336!11905-125F6;0.376714!10039-101F3;0.0504406!10791-110H8;0.611728!10017-101C8;0.572229!10045-101F9;0.799771!10509-107D5;0.10903!10839-111E2;0.646014!10692-109F8;0.00221586!10079-102A7;0.52983!10078-102A6;0.166151!10721-110A1;0.390108!10569-108B2;0.0154699!10570-108B3;0.577775!10571-108B4;0.826755!10647-109A8;0.777553!10752-110D5;0.568801!10782-110G8;0.146563!10726-110A6;0.238569!10018-101C9;0.645289!10086-102B5;0.878222!10182-103D2;0.85829!10165-103B3;0.900826!10499-107C4;0.769294!10408-106B3;0.158358!10019-101D1;0.640888!10068-101I5;0.648067!10075-102A3;0.991038!10077-102A5;0.254756!10727-110A7;0.192384!10775-110G1;0.597739!10412-106B7;0.0700385!12231-129F8;0.674399!12232-129F9;0.018983!12233-129G1;0.0550829!12234-129G2;0.208465!10414-106B9;0.799355!10170-103B8;0.256685!10183-103D3;0.809765!10150-102I6;0.978076!10174-103C3;0.561387!10155-103A2;0.597856!10038-101F2;0.174591!10838-111E1;0.334198!10759-110E3;0.699091!10514-107E1;0.952902!10465-106H6;0.73596!10691-109F7;0.172488!10843-111E6;0.291197!10844-111E7;0.493314!11747-123G1;0.173117!11748-123G2;0.887923!11749-123G3;0.969894!11750-123G4;0.858296!11751-123G5;0.590088!11840-124H4;0.298006!11752-123G6;0.11588!11753-123G7;0.428405!11754-123G8;0.141767!11755-123G9;0.482426!11756-123H1;0.809737!11833-124G6;0.666416!11760-123H5;0.257917!11836-124G9;0.171766!11758-123H3;0.768694!11835-124G8;0.484745!11762-123H7;0.14003!11838-124H2;0.117717!11757-123H2;0.179389!11759-123H4;0.766908!11761-123H6;0.715595!11842-124H6;0.321124!11837-124H1;0.0874229!10568-108B1;0.288164!13230-141I8;0.086298!13231-141I9;0.111818!10696-109G3;0.0660426!10493-107B7;0.175163!10494-107B8;0.0179172!10850-111F4;0.0277019!10851-111F5;0.838798!10852-111F6;0.384237!10853-111F7;0.789286!10854-111F8;0.107529!10855-111F9;0.209502!10856-111G1;0.871824!10847-111F1;0.275549!10846-111E9;0.472178!10848-111F2;0.036446!10845-111E8;0.0210833!10857-111G2;0.0651897!10858-111G3;0.798616!10156-103A3;0.472422!11901-125F2;0.471637!11902-125F3;0.873352!11903-125F4;0.856506!10689-109F5;0.934937!10648-109A9;0.120289!10784-110H1;0.836621!10744-110C6;0.883476!10772-110F7;0.017401!10474-106I6;0.262108!10600-108E6;0.0974312!10684-109E9;0.552908!12226-129F3;0.648521!12227-129F4;0.500382!10508-107D4;0.605561!10539-107G8;0.0435342!10607-108F4;0.130418!10555-107I6;0.162614!10774-110F9;0.174185!10637-108I7;0.3256!10663-109C6;0.170661!10728-110A8;0.30054!10729-110A9;0.50326!10430-106D7;0.0450235!10730-110B1;0.06703!10813-111B3;0.0324903!10812-111B2;0.475102!10037-101F1;0.00913714!10172-103C1;0.518853!10163-103B1;0.784399!10076-102A4;0.377585!10073-102A1;0.781131!10036-101E9;0.69166!10195-103E6;0.368645!10277-104E7;0.66788!10434-106E2;0.407227!10550-107I1;0.384568!10545-107H5;0.193762!10544-107H4;0.191269!10704-109H2;0.336834!10510-107D6;0.0690318!10558-107I9;0.348196!10020-101D2;0.499162!10732-110B3;0.134563!10049-101G4;0.88876!10698-109G5;0.425066!10437-106E5;0.721217!10417-106C3;0.853899!10035-101E8;0.624678!10171-103B9;0.599453!10157-103A4;0.877655!10034-101E7;0.517232!10072-101I9;0.499555!10199-103F1;0.360033!10200-103F2;0.276869!10697-109G4;0.133564!10723-110A3;0.0713421!10179-103C8;0.454999!10160-103A7;0.891203!10180-103C9;0.911909!10162-103A9;0.670924!10021-101D3;0.938018!10840-111E3;0.809263!10706-109H4;0.087654!10033-101E6;0.533847!10032-101E5;0.872456!10490-107B4;0.450688!10439-106E7;0.0164019!10022-101D4;0.156428!10176-103C5;0.453026!10469-106I1;0.961425!10067-101I4;0.0375831!10411-106B6;0.42695!10471-106I3;0.151774!10030-101E3;0.00173037!10475-106I7;0.0353406!10787-110H4;0.129578!10477-106I9;0.20498!10695-109G2;0.521563!11771-123I7;0.202026!11772-123I8;0.692768!11773-123I9;0.447917!10093-102C3;0.525467!10442-106F1;0.0876602!10442-106F1;0.0400388!10201-103F3;0.0335924!10639-108I9;0.579401!11843-124H7;0.627156!11841-124H5;0.251082!10693-109F9;0.3939!10436-106E4;0.187965!10483-107A6;0.478162!10282-104F3;0.888241!10023-101D5;0.965509!10066-101I3;0.532767!10065-101I2;0.121338!10800-110I8;0.232105!10610-108F7;0.0704492!10841-111E4;0.0714473!10541-107H1;0.00387108!10842-111E5;0.0770659!10562-108A4;0.0124771!10024-101D6;0.251371!10064-101I1;0.414525!10609-108F6;0.328902!10048-101G3;0.0305382!10781-110G7;0.0467961!10181-103D1;0.0386452!10159-103A6;0.549717!10056-101H2;0.633662!10737-110B8;0.208349!10025-101D7;0.299677!10044-101F8;0.216356!10424-106D1;0.0217865!10463-106H4;0.131914!10616-108G4;0.200877!10486-107A9;0.86327!10062-101H8;0.110567!10202-103F4;0.235593!10158-103A5;0.151693!10441-106E9;0.209045!10031-101E4;0.503533!10063-101H9;0.29311!10063-101H9;0.705187!11763-123H8;0.682753!11765-123I1;0.371481!11768-123I4;0.0518495!10807-111A6;0.208193!10790-110H7;0.495373!10798-110I6;0.0191514!10786-110H3;0.0787574!10591-108D6;0.961999!10593-108D8;0.14989!10590-108D5;0.272821!10026-101D8;0.0194061!10096-102C6;0.814064!10168-103B6;0.13785!10154-103A1;0.743648!10209-103G2;0.29236!10061-101H7;0.327631!10027-101D9;0.136062!10043-101F7;0.720201!10783-110G9;0.444152!10028-101E1;0.351873!10060-101H6;0.0812781!10203-103F5;0.0027051!10059-101H5;0.299381!10047-101G2;0.200648!10029-101E2;0.0469808!10058-101H4;0.151459!10418-106C4;0.0818861!10492-107B6;0.717587!10694-109G1;0.115358!10797-110I5;0.856605!10057-101H3;0.505974!10100-102D1;0.100693!10055-101H1;0.243607!10204-103F6;0.542261!10191-103E2;0.239399!10563-108A5;0.0712619
|name=CTSTTTCTTTAAG,motif929,CNhs13809,T:1656.0(33.11%),B:18730.1(26.15%),P:1e-27
|name=CTSTTTCTTTAAG,motif929,CNhs13809,T:1656.0(33.11%),B:18730.1(26.15%),P:1e-27
|tomtom_result=SPT2#MA0387.1;-4;0.00173385;0.825313;0.711354;9;CTGTTTCTTTAAG;TTCTTTAATT;-!fkh#MA0446.1;-1;0.00233175;1.10991;0.711354;11;CTGTTTCTTTAAG;TGTTTGCTTAA;+!RME1#MA0370.1;-3;0.00255804;1.21763;0.711354;10;CTGTTTCTTTAAG;TTCCTTTGGA;-!C15#MA0170.1;-5;0.00317011;1.50897;0.711354;7;CTGTTTCTTTAAG;TAATTAA;-!Dfd#MA0186.1;-5;0.0041992;1.99882;0.711354;7;CTGTTTCTTTAAG;TCATTAA;-!Antp#MA0166.1;-5;0.00577994;2.75125;0.711354;7;CTGTTTCTTTAAG;TCATTAA;-!Scr#MA0203.1;-5;0.006083;2.89551;0.711354;7;CTGTTTCTTTAAG;TCATTAA;-!btn#MA0215.1;-5;0.00639827;3.04558;0.711354;7;CTGTTTCTTTAAG;TCATTAA;-!ftz#MA0225.1;-5;0.00672669;3.20191;0.711354;7;CTGTTTCTTTAAG;TAATTAA;-!FKH1#MA0296.1;2;0.0105129;5.00416;0.856485;13;CTGTTTCTTTAAG;TCCTCTTTGTTTACAATTCA;-!AZF1#MA0277.1;-3;0.0106243;5.05717;0.856485;9;CTGTTTCTTTAAG;TTTCTTTTT;-!lab#MA0230.1;-5;0.0113863;5.41989;0.856485;7;CTGTTTCTTTAAG;TAATTAA;-!Ubx#MA0094.2;-5;0.0116987;5.56856;0.856485;8;CTGTTTCTTTAAG;TAATTAAA;-!abd-A#MA0206.1;-5;0.0136677;6.50583;0.89896;7;CTGTTTCTTTAAG;TAATTAA;-!ems#MA0219.1;-5;0.0142982;6.80596;0.89896;7;CTGTTTCTTTAAG;TCATTAA;-!ARID3A#MA0151.1;-7;0.0151124;7.1935;0.89896;6;CTGTTTCTTTAAG;TTTAAT;-!bap#MA0211.1;-8;0.0164035;7.80806;0.91773;5;CTGTTTCTTTAAG;TTAAGTG;+!eve#MA0221.1;-5;0.017998;8.56707;0.91773;7;CTGTTTCTTTAAG;TCATTAG;-!bsh#MA0214.1;-5;0.0206169;9.81366;0.91773;7;CTGTTTCTTTAAG;CAATTAA;-!pb#MA0238.1;-5;0.0206169;9.81366;0.91773;7;CTGTTTCTTTAAG;TAATTAA;-
}}
}}

Latest revision as of 12:48, 7 September 2012

Full Name: CTSTTTCTTTAAG,motif929,CNhs13809,T:1656.0(33.11%),B:18730.1(26.15%),P:1e-27

Motif matrix
POACGT
11.656914.112220.248519.984
2361.0081.656132.481160.856
31.656730.296922.3921.656
41.6561.6561.6561651.032
51.656125.856616.032912.456
61.656384.1921.6561268.496
7250.0561402.6321.6561.656
81.656124.21.6561528.488
91.6561.6561.6561651.032
10124.21.6561.6561528.488
111651.0321.6561.6561.656
121651.0321.6561.6561.656
13125.8561.6561402.632125.856

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPT2#MA0387.1-40.001733850.8253130.7113549CTGTTTCTTTAAGTTCTTTAATT-
fkh#MA0446.1-10.002331751.109910.71135411CTGTTTCTTTAAGTGTTTGCTTAA+
RME1#MA0370.1-30.002558041.217630.71135410CTGTTTCTTTAAGTTCCTTTGGA-
C15#MA0170.1-50.003170111.508970.7113547CTGTTTCTTTAAGTAATTAA-
Dfd#MA0186.1-50.00419921.998820.7113547CTGTTTCTTTAAGTCATTAA-
Antp#MA0166.1-50.005779942.751250.7113547CTGTTTCTTTAAGTCATTAA-
Scr#MA0203.1-50.0060832.895510.7113547CTGTTTCTTTAAGTCATTAA-
btn#MA0215.1-50.006398273.045580.7113547CTGTTTCTTTAAGTCATTAA-
ftz#MA0225.1-50.006726693.201910.7113547CTGTTTCTTTAAGTAATTAA-
FKH1#MA0296.120.01051295.004160.85648513CTGTTTCTTTAAGTCCTCTTTGTTTACAATTCA-
AZF1#MA0277.1-30.01062435.057170.8564859CTGTTTCTTTAAGTTTCTTTTT-
lab#MA0230.1-50.01138635.419890.8564857CTGTTTCTTTAAGTAATTAA-
Ubx#MA0094.2-50.01169875.568560.8564858CTGTTTCTTTAAGTAATTAAA-
abd-A#MA0206.1-50.01366776.505830.898967CTGTTTCTTTAAGTAATTAA-
ems#MA0219.1-50.01429826.805960.898967CTGTTTCTTTAAGTCATTAA-
ARID3A#MA0151.1-70.01511247.19350.898966CTGTTTCTTTAAGTTTAAT-
bap#MA0211.1-80.01640357.808060.917735CTGTTTCTTTAAGTTAAGTG+
eve#MA0221.1-50.0179988.567070.917737CTGTTTCTTTAAGTCATTAG-
bsh#MA0214.1-50.02061699.813660.917737CTGTTTCTTTAAGCAATTAA-
pb#MA0238.1-50.02061699.813660.917737CTGTTTCTTTAAGTAATTAA-
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