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MacroAPE 1083:CNhs11332 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;108.16104929458847;288.33894398108663;71.61150043041485;138.3033597526158!2;97.82704632395598;228.19511524923706;91.1179212078355;189.274770...")
 
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798879!10534-107G3;0.00830476!10429-106D6;0.0846574!10464-106H5;0.170125!10827-111C8;0.0200067!10789-110H6;0.031761!10828-111C9;0.016212!10788-110H5;0.0594398!10792-110H9;0.0391661!10765-110E9;0.0275397!10829-111D1;0.0308527!10830-111D2;0.0111904!10831-111D3;0.0441953!10832-111D4;0.0177706!10833-111D5;0.0114897!10764-110E8;0.00971812!10770-110F5;0.0982125!10399-106A3;0.0159457!10400-106A4;0.0200991!10405-106A9;0.0196677!10834-111D6;0.0220331!10835-111D7;0.0184599!10836-111D8;0.0576255!10837-111D9;0.398178!10699-109G6;0.015667!10802-111A1;0.099149!10796-110I4;0.0695749!10010-101C1;0.238309!10810-111A9;0.114637!10421-106C7;0.12911!10708-109H6;0.0345151!12235-129G3;0.296843!12236-129G4;0.578677!12237-129G5;0.896258!10167-103B5;0.816809!10151-102I7;0.0446899!10428-106D5;0.0222218!10795-110I3;0.259831!10805-111A4;0.0253934!10052-101G7;0.303746!10189-103D9;0.0538492!10589-108D4;0.0787909!10425-106D2;0.127592!10427-106D4;0.158631!10702-109G9;0.0898448!10432-106D9;0.295873!10496-107C1;0.607867!10718-109I7;0.786641!10011-101C2;0.0121017!10053-101G8;0.057092!10686-109F2;0.443328!10084-102B3;0.231522!10012-101C3;0.0459854!10085-102B4;0.0422444!10482-107A5;0.0470485!10419-106C5;0.752938!10080-102A8;0.448207!10760-110E4;0.0839031!10709-109H7;0.446479!10710-109H8;0.261697!10703-109H1;0.100099!10719-109I8;0.284303!10642-109A3;0.521841!10177-103C6;0.548987!10164-103B2;0.0407946!10173-103C2;0.0302962!10166-103B4;0.0675221!10083-102B2;0.0333106!10188-103D8;0.0862526!10552-107I3;0.0264072!10553-107I4;0.0121691!10013-101C4;0.49845!10536-107G5;0.0760715!10618-108G6;0.934867!10423-106C9;0.139593!10785-110H2;0.0653079!12238-129G6;0.229222!12239-129G7;0.596933!12240-129G8;0.192629!10416-106C2;0.542223!10801-110I9;0.0296064!10766-110F1;0.0159351!10824-111C5;0.0247363!10825-111C6;0.0219392!10826-111C7;0.0233214!10454-106G4;0.0304785!10409-106B4;0.0230501!10638-108I8;0.0424053!10636-108I6;0.0642315!10513-107D9;0.465849!10420-106C6;0.202708!10082-102B1;0.566792!10014-101C5;0.147612!10070-101I7;0.0569363!10452-106G2;0.0305762!10453-106G3;0.132062!10449-106F8;0.0307303!10042-101F6;0.028683!10069-101I6;0.0475978!10193-103E4;0.442522!10631-108I1;0.0596535!10438-106E6;0.0146409!10488-107B2;0.617154!10196-103E7;0.0659422!10071-101I8;0.0377691!10071-101I8;0.0349938!10041-101F5;0.0566227!10451-106G1;0.0233946!10450-106F9;0.11982!10604-108F1;0.293169!10605-108F2;0.682448!10606-108F3;0.153141!10603-108E9;0.654461!10497-107C2;0.968597!10448-106F7;0.708541!10643-109A4;0.154591!10426-106D3;0.58167!10431-106D8;0.27854!10197-103E8;0.226844!10443-106F2;0.14297!10815-111B5;0.207754!10816-111B6;0.0106189!10817-111B7;0.0239231!10015-101C6;0.0116055!10410-106B5;0.231712!10054-101G9;0.618677!10758-110E2;0.127095!10711-109H9;0.973307!10040-101F4;0.28555!10470-106I2;0.0328248!10415-106C1;0.151254!10198-103E9;0.780574!10614-108G2;0.0176751!10612-108F9;0.177396!10549-107H9;0.596875!10615-108G3;0.580832!10487-107B1;0.555245!10433-106E1;0.0215354!10688-109F4;0.902789!10444-106F3;0.835484!10444-106F3;0.239201!10485-107A8;0.203793!10413-106B8;0.888688!10175-103C4;0.394881!10161-103A8;0.052642!12131-128D7;0.0345578!10624-108H3;0.331006!10712-109I1;0.143698!10205-103F7;0.0127366!10206-103F8;0.0465337!10207-103F9;0.0846028!10050-101G5;0.0179359!10051-101G6;0.536605!10016-101C7;0.427456!10046-101G1;0.203291!10778-110G4;0.0768724!10633-108I3;0.0601333!10818-111B8;0.377244!10819-111B9;0.227981!10820-111C1;0.211246!10484-107A7;0.23866!10808-111A7;0.640393!10169-103B7;0.0389205!10153-102I9;0.0481255!13425-144D5;0.0247352!13433-144E4;0.681816!13437-144E8;0.664287!11904-125F5;0.300038!11905-125F6;0.942246!10039-101F3;0.461497!10791-110H8;0.0349461!10017-101C8;0.128724!10045-101F9;0.158104!10509-107D5;0.0431431!10839-111E2;0.715992!10692-109F8;0.00187196!10079-102A7;0.797933!10078-102A6;0.175534!10721-110A1;0.595757!10569-108B2;0.103754!10570-108B3;0.934982!10571-108B4;0.681394!10647-109A8;0.992137!10752-110D5;0.59151!10782-110G8;0.068361!10726-110A6;0.210048!10018-101C9;0.614869!10086-102B5;0.597752!10182-103D2;0.519766!10165-103B3;0.0497726!10499-107C4;0.0372311!10408-106B3;0.901052!10019-101D1;0.708069!10068-101I5;0.104116!10075-102A3;0.0121545!10077-102A5;0.119479!10727-110A7;0.835643!10775-110G1;0.0109609!10412-106B7;0.10161!12231-129F8;0.985723!12232-129F9;0.0467718!12233-129G1;0.0790287!12234-129G2;0.0779177!10414-106B9;0.0818743!10170-103B8;0.967612!10183-103D3;0.0345847!10150-102I6;0.0463044!10174-103C3;0.0194612!10155-103A2;0.0694918!10038-101F2;0.027712!10838-111E1;0.0534987!10759-110E3;0.630637!10514-107E1;0.652593!10465-106H6;0.169636!10691-109F7;0.342351!10843-111E6;0.983081!10844-111E7;0.868794!11747-123G1;0.949269!11748-123G2;0.359744!11749-123G3;0.912539!11750-123G4;0.250127!11751-123G5;0.382382!11840-124H4;0.434162!11752-123G6;0.78257!11753-123G7;0.476907!11754-123G8;0.530717!11755-123G9;0.822557!11756-123H1;0.669405!11833-124G6;0.141744!11760-123H5;0.460352!11836-124G9;0.243025!11758-123H3;0.725211!11835-124G8;0.437749!11762-123H7;0.527257!11838-124H2;0.541145!11757-123H2;0.461697!11759-123H4;0.797919!11761-123H6;0.327023!11842-124H6;0.125379!11837-124H1;0.508975!10568-108B1;0.271915!13230-141I8;0.0342305!13231-141I9;0.455333!10696-109G3;0.597335!10493-107B7;0.0401532!10494-107B8;0.239954!10850-111F4;0.947818!10851-111F5;0.000327838!10852-111F6;0.174541!10853-111F7;0.37501!10854-111F8;0.0042903!10855-111F9;0.807233!10856-111G1;0.400231!10847-111F1;0.0379227!10846-111E9;0.969624!10848-111F2;0.904788!10845-111E8;0.0133008!10857-111G2;0.865248!10858-111G3;0.00332021!10156-103A3;0.0806506!11901-125F2;0.024666!11902-125F3;0.165728!11903-125F4;0.422261!10689-109F5;0.209004!10648-109A9;0.0232554!10784-110H1;0.176352!10744-110C6;0.31044!10772-110F7;0.0220622!10474-106I6;0.0171923!10600-108E6;0.073288!10684-109E9;0.147114!12226-129F3;0.746464!12227-129F4;0.503094!10508-107D4;0.0482046!10539-107G8;0.551571!10607-108F4;0.658927!10555-107I6;0.214662!10774-110F9;0.956379!10637-108I7;0.126646!10663-109C6;0.414334!10728-110A8;0.295207!10729-110A9;0.884147!10430-106D7;0.212135!10730-110B1;0.0922747!10813-111B3;0.649695!10812-111B2;0.134531!10037-101F1;0.667063!10172-103C1;0.0365517!10163-103B1;0.0509859!10076-102A4;0.0215214!10073-102A1;0.0412792!10036-101E9;0.0548254!10195-103E6;0.0481058!10277-104E7;0.0327666!10434-106E2;0.096256!10550-107I1;0.580882!10545-107H5;0.245177!10544-107H4;0.261487!10704-109H2;0.715822!10510-107D6;0.601127!10558-107I9;0.107274!10020-101D2;0.44305!10732-110B3;0.0709736!10049-101G4;0.505197!10698-109G5;0.658062!10437-106E5;0.0867974!10417-106C3;0.0288209!10035-101E8;0.910298!10171-103B9;0.0372967!10157-103A4;0.0430216!10034-101E7;0.0214008!10072-101I9;0.0350974!10199-103F1;0.0632023!10200-103F2;0.392096!10697-109G4;0.24439!10723-110A3;0.3849!10179-103C8;0.319062!10160-103A7;0.0252142!10180-103C9;0.0207227!10162-103A9;0.100404!10021-101D3;0.0365101!10840-111E3;0.0730545!10706-109H4;0.0294167!10033-101E6;0.48303!10032-101E5;0.0751137!10490-107B4;0.0431618!10439-106E7;0.0386401!10022-101D4;0.621055!10176-103C5;0.0351522!10469-106I1;0.0322293!10067-101I4;0.425315!10411-106B6;0.0361596!10471-106I3;0.421674!10030-101E3;0.0141502!10475-106I7;0.0423472!10787-110H4;0.531904!10477-106I9;0.135722!10695-109G2;0.693686!11771-123I7;0.00197604!11772-123I8;0.868925!11773-123I9;0.478958!10093-102C3;0.0337389!10442-106F1;0.298123!10442-106F1;0.121893!10201-103F3;0.173274!10639-108I9;0.0620417!11843-124H7;0.133997!11841-124H5;0.372386!10693-109F9;0.292308!10436-106E4;0.776633!10483-107A6;0.204807!10282-104F3;0.753206!10023-101D5;0.44805!10066-101I3;0.724744!10065-101I2;0.832437!10800-110I8;0.0898304!10610-108F7;0.890274!10841-111E4;0.794416!10541-107H1;0.22293!10842-111E5;0.877579!10562-108A4;0.574577!10024-101D6;0.733866!10064-101I1;0.0251478!10609-108F6;0.0796948!10048-101G3;0.614217!10781-110G7;0.0443509!10181-103D1;0.183713!10159-103A6;0.0485343!10056-101H2;0.0313738!10737-110B8;0.0674736!10025-101D7;0.0849864!10044-101F8;0.818557!10424-106D1;0.211933!10463-106H4;0.0513382!10616-108G4;0.948326!10486-107A9;0.820003!10062-101H8;0.0727919!10202-103F4;0.0200517!10158-103A5;0.352651!10441-106E9;0.0462164!10031-101E4;0.933658!10063-101H9;0.0472655!10063-101H9;0.055888!11763-123H8;0.0904746!11765-123I1;0.50055!11768-123I4;0.720135!10807-111A6;0.731676!10790-110H7;0.356345!10798-110I6;0.697258!10786-110H3;0.548067!10591-108D6;0.769615!10593-108D8;0.463686!10590-108D5;0.3768!10026-101D8;0.10326!10096-102C6;0.614911!10168-103B6;0.565976!10154-103A1;0.0720918!10209-103G2;0.034774!10061-101H7;0.658624!10027-101D9;0.105158!10043-101F7;0.183468!10783-110G9;0.377652!10028-101E1;0.280312!10060-101H6;0.106423!10203-103F5;0.0279566!10059-101H5;0.680036!10047-101G2;0.75202!10029-101E2;0.579001!10058-101H4;0.169542!10418-106C4;0.122646!10492-107B6;0.881471!10694-109G1;0.0768812!10797-110I5;1.60137e-05!10057-101H3;0.627024!10100-102D1;0.220104!10055-101H1;0.0479293!10204-103F6;0.043259!10191-103E2;0.0108744!10563-108A5;0.262603
|name=CNhs11332_bl_f1
|name=CNhs11332_bl_f1
|tomtom_result=abi4#MA0123.1;-1;0.00670149;3.18991;1;10;CCGGCTCCTCC;CGGTGCCCCC;+!DOT6#MA0351.1;1;0.00706486;3.36287;1;11;CCGGCTCCTCC;TTCTGCACCTCATCGCATCCT;+!CHA4#MA0283.1;-3;0.00755188;3.5947;1;8;CCGGCTCCTCC;TCTCCGCC;-!ZNF354C#MA0130.1;-4;0.0146281;6.96298;1;6;CCGGCTCCTCC;ATCCAC;+!SPIB#MA0081.1;-4;0.0152294;7.24917;1;7;CCGGCTCCTCC;TTCCTCT;-
}}
}}

Latest revision as of 13:09, 7 September 2012

Full Name: CNhs11332_bl_f1

Motif matrix
POACGT
1108.16104929458847288.3389439810866371.61150043041485138.3033597526158
297.82704632395598228.1951152492370691.1179212078355189.27477067767686
349.19727059609772450.540384241737318.2357566198752188.4414420009958
412.872096629180668185.57671760261593392.471393697307915.494645529600646
515.01065182052968559.00341546865892.78175995792741129.619026211589723
60.00.00.0606.4148534587058
78.402372677576876586.19472469429430.011.817756086834391
836.68099249039904560.12730683664821.78529346648155127.821260665176571
9101.5261452076281961.84626196561707491.82727732240905351.2151689630512
1024.643787476304116378.8466412166609130.684637332983372.23978743275737
1184.18343617369463287.0239820605281760.704856945770125174.50257827871275

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
abi4#MA0123.1-10.006701493.18991110CCGGCTCCTCCCGGTGCCCCC+
DOT6#MA0351.110.007064863.36287111CCGGCTCCTCCTTCTGCACCTCATCGCATCCT+
CHA4#MA0283.1-30.007551883.594718CCGGCTCCTCCTCTCCGCC-
ZNF354C#MA0130.1-40.01462816.9629816CCGGCTCCTCCATCCAC+
SPIB#MA0081.1-40.01522947.2491717CCGGCTCCTCCTTCCTCT-
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