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MacroAPE 1083:CNhs10633 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1013.6299959557218;124.72516089178784;968.2148795286259;183.76505225411586!2;990.910051544249;18.49295882216969;1112.7895955664872;168.14248...")
 
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122H7;0.328406!11216-116B1;0.227585!12179-129A1;0.303737!12180-129A2;1.75284e-06!12181-129A3;4.12327e-06!12176-128I7;5.62931e-06!12177-128I8;1.45566e-05!12182-129A4;7.34009e-06!12183-129A5;5.3331e-06!12184-129A6;3.55768e-05!10809-111A8;2.72256e-05!10597-108E3;2.71498e-06!10717-109I6;0.0173866!10455-106G5;2.37072e-05!10534-107G3;0.478779!10429-106D6;0.146403!10464-106H5;0.966927!10827-111C8;0.561765!10789-110H6;0.268674!10828-111C9;0.0359685!10788-110H5;0.0650754!10792-110H9;0.43129!10765-110E9;0.178783!10829-111D1;0.58097!10830-111D2;0.896832!10831-111D3;0.498049!10832-111D4;0.21174!10833-111D5;0.613288!10764-110E8;0.78678!10770-110F5;0.335315!10399-106A3;0.317074!10400-106A4;0.896467!10405-106A9;0.944662!10834-111D6;0.775312!10835-111D7;0.345219!10836-111D8;0.0187304!10837-111D9;0.0954964!10699-109G6;0.695446!10802-111A1;0.676026!10796-110I4;0.783815!10010-101C1;0.0116268!10810-111A9;0.00111301!10421-106C7;4.65792e-05!10708-109H6;0.613894!12235-129G3;0.0001249!12236-129G4;0.0979698!12237-129G5;0.0100061!10167-103B5;0.0139025!10151-102I7;0.649269!10428-106D5;0.517156!10795-110I3;0.378119!10805-111A4;0.210789!10052-101G7;3.68018e-05!10189-103D9;0.262675!10589-108D4;2.91791e-05!10425-106D2;0.000675857!10427-106D4;0.000129675!10702-109G9;0.89614!10432-106D9;0.378533!10496-107C1;0.0248185!10718-109I7;0.377998!10011-101C2;0.331986!10053-101G8;0.0375785!10686-109F2;1.70376e-05!10084-102B3;0.34773!10012-101C3;0.818795!10085-102B4;0.471025!10482-107A5;0.779251!10419-106C5;0.016234!10080-102A8;0.0107096!10760-110E4;0.0305476!10709-109H7;3.69221e-05!10710-109H8;0.00373591!10703-109H1;0.00443883!10719-109I8;4.2282e-06!10642-109A3;1.62113e-06!10177-103C6;0.000195341!10164-103B2;0.693261!10173-103C2;0.67256!10166-103B4;0.955851!10083-102B2;0.920623!10188-103D8;0.969743!10552-107I3;0.573861!10553-107I4;3.15949e-05!10013-101C4;0.000603715!10536-107G5;0.0284557!10618-108G6;0.000508182!10423-106C9;0.00491222!10785-110H2;0.00203624!12238-129G6;0.0012475!12239-129G7;0.891655!12240-129G8;0.409637!10416-106C2;0.447688!10801-110I9;0.684601!10766-110F1;0.344134!10824-111C5;0.384959!10825-111C6;0.00259197!10826-111C7;0.00582961!10454-106G4;0.0255309!10409-106B4;0.000628255!10638-108I8;0.443454!10636-108I6;5.14503e-06!10513-107D9;3.26334e-05!10420-106C6;2.96884e-05!10082-102B1;1.55522e-08!10014-101C5;0.106555!10070-101I7;0.00978314!10452-106G2;0.0435278!10453-106G3;0.0747975!10449-106F8;0.108161!10042-101F6;0.100767!10069-101I6;0.387666!10193-103E4;0.554363!10631-108I1;0.826774!10438-106E6;0.300536!10488-107B2;0.0322543!10196-103E7;6.18668e-05!10071-101I8;0.249162!10071-101I8;0.00170242!10041-101F5;0.676189!10451-106G1;0.000192801!10450-106F9;0.000307252!10604-108F1;0.000947132!10605-108F2;0.028652!10606-108F3;0.0112331!10603-108E9;0.0274554!10497-107C2;0.019595!10448-106F7;0.211292!10643-109A4;7.31428e-05!10426-106D3;0.000905041!10431-106D8;0.000460113!10197-103E8;3.10308e-07!10443-106F2;0.25199!10815-111B5;0.0064918!10816-111B6;0.000271328!10817-111B7;0.000307011!10015-101C6;0.0002617!10410-106B5;0.0157247!10054-101G9;0.000294221!10758-110E2;0.786912!10711-109H9;0.209789!10040-101F4;0.0290455!10470-106I2;0.66273!10415-106C1;0.000734917!10198-103E9;0.242134!10614-108G2;0.00489047!10612-108F9;1.98484e-06!10549-107H9;0.00149171!10615-108G3;0.00147396!10487-107B1;8.45543e-05!10433-106E1;0.00328716!10688-109F4;0.179974!10444-106F3;0.149754!10444-106F3;0.000964567!10485-107A8;0.00161855!10413-106B8;0.000332638!10175-103C4;0.0539736!10161-103A8;0.649887!12131-128D7;0.380473!10624-108H3;0.0371007!10712-109I1;0.00659136!10205-103F7;0.848966!10206-103F8;0.0478123!10207-103F9;0.470261!10050-101G5;0.0036323!10051-101G6;0.88651!10016-101C7;0.587969!10046-101G1;0.0262138!10778-110G4;0.177872!10633-108I3;0.306766!10818-111B8;0.00026416!10819-111B9;0.00085874!10820-111C1;0.00131185!10484-107A7;0.00155993!10808-111A7;0.000233659!10169-103B7;0.402673!10153-102I9;0.616828!13425-144D5;0.434023!13433-144E4;4.6853e-07!13437-144E8;3.12454e-06!11904-125F5;1.59946e-06!11905-125F6;0.0719639!10039-101F3;0.105199!10791-110H8;0.629425!10017-101C8;0.000647889!10045-101F9;0.125081!10509-107D5;0.339374!10839-111E2;0.0316743!10692-109F8;9.2354e-05!10079-102A7;1.68106e-05!10078-102A6;0.00336743!10721-110A1;0.0494994!10569-108B2;1.82661e-05!10570-108B3;0.884145!10571-108B4;0.382931!10647-109A8;0.662324!10752-110D5;0.0255868!10782-110G8;0.974818!10726-110A6;0.0855381!10018-101C9;0.000236333!10086-102B5;0.0597487!10182-103D2;0.536202!10165-103B3;0.683238!10499-107C4;0.49638!10408-106B3;0.0293907!10019-101D1;0.0756838!10068-101I5;5.83419e-05!10075-102A3;0.00772168!10077-102A5;1.2296e-05!10727-110A7;2.36907e-10!10775-110G1;0.291127!10412-106B7;0.81609!12231-129F8;0.0258018!12232-129F9;0.270702!12233-129G1;0.104764!12234-129G2;0.310174!10414-106B9;0.64038!10170-103B8;0.0120754!10183-103D3;0.910294!10150-102I6;0.803653!10174-103C3;0.529853!10155-103A2;0.589471!10038-101F2;0.26414!10838-111E1;0.293292!10759-110E3;0.000199414!10514-107E1;0.0075406!10465-106H6;0.264331!10691-109F7;0.052972!10843-111E6;0.973906!10844-111E7;0.000669243!11747-123G1;3.18364e-05!11748-123G2;0.200191!11749-123G3;0.263397!11750-123G4;0.779284!11751-123G5;0.351264!11840-124H4;0.334451!11752-123G6;0.27366!11753-123G7;0.69107!11754-123G8;0.460979!11755-123G9;0.359514!11756-123H1;0.413969!11833-124G6;0.37153!11760-123H5;0.989917!11836-124G9;0.122924!11758-123H3;0.679304!11835-124G8;0.435478!11762-123H7;0.684517!11838-124H2;0.184252!11757-123H2;0.314293!11759-123H4;0.0304231!11761-123H6;0.329311!11842-124H6;0.510699!11837-124H1;0.0766721!10568-108B1;0.447026!13230-141I8;5.85992e-07!13231-141I9;0.253495!10696-109G3;0.144017!10493-107B7;0.386012!10494-107B8;4.24718e-07!10850-111F4;0.00761037!10851-111F5;2.13794e-06!10852-111F6;0.0419412!10853-111F7;0.00278852!10854-111F8;6.51388e-06!10855-111F9;0.00195569!10856-111G1;0.0688215!10847-111F1;0.00233148!10846-111E9;0.0135902!10848-111F2;0.00108404!10845-111E8;0.0133791!10857-111G2;0.000392152!10858-111G3;0.00133171!10156-103A3;0.130205!11901-125F2;0.560544!11902-125F3;0.483474!11903-125F4;0.365213!10689-109F5;0.360183!10648-109A9;5.1462e-06!10784-110H1;0.000708927!10744-110C6;0.0345974!10772-110F7;0.425618!10474-106I6;0.766039!10600-108E6;0.93957!10684-109E9;0.000115334!12226-129F3;0.0144506!12227-129F4;0.0290693!10508-107D4;0.270169!10539-107G8;0.00448378!10607-108F4;0.00355797!10555-107I6;2.0373e-05!10774-110F9;6.36375e-05!10637-108I7;0.000146777!10663-109C6;0.000235697!10728-110A8;2.34791e-05!10729-110A9;2.17741e-07!10430-106D7;0.203279!10730-110B1;0.0740565!10813-111B3;0.00353207!10812-111B2;0.230486!10037-101F1;0.506101!10172-103C1;0.625867!10163-103B1;0.947105!10076-102A4;0.476136!10073-102A1;0.761974!10036-101E9;0.497042!10195-103E6;0.722893!10277-104E7;0.79456!10434-106E2;0.7372!10550-107I1;0.0276668!10545-107H5;2.86379e-06!10544-107H4;0.000578514!10704-109H2;0.00588759!10510-107D6;0.0146894!10558-107I9;0.274064!10020-101D2;0.00240601!10732-110B3;0.0713186!10049-101G4;3.43005e-08!10698-109G5;0.446836!10437-106E5;0.0160909!10417-106C3;0.00405236!10035-101E8;0.0596276!10171-103B9;0.643837!10157-103A4;0.980721!10034-101E7;0.536253!10072-101I9;0.630311!10199-103F1;0.407732!10200-103F2;0.153862!10697-109G4;0.21969!10723-110A3;0.0197712!10179-103C8;0.00533535!10160-103A7;0.697095!10180-103C9;0.727703!10162-103A9;0.913607!10021-101D3;0.72592!10840-111E3;0.0513946!10706-109H4;0.782197!10033-101E6;0.00951465!10032-101E5;0.513079!10490-107B4;0.788381!10439-106E7;9.38476e-05!10022-101D4;0.00012308!10176-103C5;0.0386972!10469-106I1;0.828381!10067-101I4;0.000250344!10411-106B6;0.560835!10471-106I3;4.93027e-05!10030-101E3;8.77229e-05!10475-106I7;0.192244!10787-110H4;2.87602e-08!10477-106I9;7.91703e-05!10695-109G2;0.000422003!11771-123I7;0.927433!11772-123I8;0.0892079!11773-123I9;0.0143935!10093-102C3;0.122499!10442-106F1;0.00772599!10442-106F1;0.0370096!10201-103F3;0.0463086!10639-108I9;0.308109!11843-124H7;0.0933714!11841-124H5;8.60545e-06!10693-109F9;1.92877e-06!10436-106E4;3.25535e-07!10483-107A6;0.0206893!10282-104F3;0.119985!10023-101D5;0.262489!10066-101I3;0.900282!10065-101I2;0.694391!10800-110I8;0.507489!10610-108F7;0.000958479!10841-111E4;0.000187263!10541-107H1;0.000192948!10842-111E5;0.0158213!10562-108A4;2.31576e-07!10024-101D6;0.0280101!10064-101I1;0.00198586!10609-108F6;0.0777506!10048-101G3;0.0261663!10781-110G7;0.631128!10181-103D1;0.0477167!10159-103A6;0.34757!10056-101H2;0.120141!10737-110B8;0.807137!10025-101D7;0.16256!10044-101F8;9.68524e-08!10424-106D1;4.00174e-08!10463-106H4;0.473055!10616-108G4;0.00240841!10486-107A9;0.125261!10062-101H8;0.00385082!10202-103F4;0.0616586!10158-103A5;0.00715056!10441-106E9;0.131982!10031-101E4;0.00033877!10063-101H9;0.694647!10063-101H9;0.621012!11763-123H8;0.00996732!11765-123I1;0.222083!11768-123I4;0.49245!10807-111A6;0.208102!10790-110H7;0.000557774!10798-110I6;2.24559e-08!10786-110H3;5.54556e-06!10591-108D6;9.82458e-05!10593-108D8;5.10934e-05!10590-108D5;0.000560702!10026-101D8;1.79543e-11!10096-102C6;0.23328!10168-103B6;6.61652e-06!10154-103A1;0.792976!10209-103G2;0.359444!10061-101H7;0.030649!10027-101D9;0.847225!10043-101F7;0.000508263!10783-110G9;0.000181187!10028-101E1;1.62946e-05!10060-101H6;0.047811!10203-103F5;0.676558!10059-101H5;0.151878!10047-101G2;0.908297!10029-101E2;1.90561e-06!10058-101H4;0.000126536!10418-106C4;0.358204!10492-107B6;0.0012802!10694-109G1;3.99561e-05!10797-110I5;0.107724!10057-101H3;0.0772337!10100-102D1;0.876389!10055-101H1;0.0493796!10204-103F6;0.437567!10191-103E2;0.0102566!10563-108A5;4.14158e-05
|name=CNhs10633_bl_f0
|name=CNhs10633_bl_f0
|tomtom_result=SPIB#MA0081.1;-3;0.000133135;0.0633723;0.108318;7;AGGAGAGGAAGA;AGAGGAA;+!Trl#MA0205.1;0;0.000228099;0.108575;0.108318;10;AGGAGAGGAAGA;GAGAGAGCAA;-!Klf4#MA0039.1;-2;0.00125001;0.595004;0.395731;10;AGGAGAGGAAGA;TAAAGGAAGG;+!id1#MA0120.1;1;0.00196429;0.935;0.466394;11;AGGAGAGGAAGA;CGAAAAGGAAAA;-!SPI1#MA0080.2;-5;0.00292018;1.39;0.532595;7;AGGAGAGGAAGA;AGGAAGT;+!ELF5#MA0136.1;-4;0.00336465;1.60157;0.532595;8;AGGAGAGGAAGA;AAGGAAGTA;-!Gata1#MA0035.2;-1;0.0041576;1.97902;0.564096;11;AGGAGAGGAAGA;ACAGATAAGAA;+!GABPA#MA0062.1;-3;0.00501636;2.38779;0.595536;9;AGGAGAGGAAGA;ACCGGAAGAG;+!AZF1#MA0277.1;-1;0.00579486;2.75835;0.611518;9;AGGAGAGGAAGA;AAAAAGAAA;+!ETS1#MA0098.1;-5;0.0091849;4.37201;0.69233;6;AGGAGAGGAAGA;CGGAAA;-!ELK1#MA0028.1;-1;0.00937976;4.46477;0.69233;10;AGGAGAGGAAGA;GAGCCGGAAG;+!FEV#MA0156.1;-4;0.0100926;4.80409;0.69233;8;AGGAGAGGAAGA;CAGGAAAT;+!HMG-I/Y#MA0045.1;1;0.0101757;4.84364;0.69233;12;AGGAGAGGAAGA;CAACAAATGGAAAAAC;+!STB3#MA0390.1;1;0.0102055;4.8578;0.69233;12;AGGAGAGGAAGA;CCAGAGTGAAAAATTTTGGAC;-!SFL1#MA0377.1;3;0.0120828;5.7514;0.765039;12;AGGAGAGGAAGA;TAGAGAATAGAAGAAATAAAA;+!SPI1#MA0080.2;-5;0.0153212;7.29291;0.909458;6;AGGAGAGGAAGA;CGGAAG;+!PEND#MA0127.1;-2;0.0168526;8.02182;0.941512;10;AGGAGAGGAAGA;AATAAGAAGT;-!SFP1#MA0378.1;-2;0.0207579;9.88076;0.997635;10;AGGAGAGGAAGA;CCGTAGAAAATTTTTTTCAAT;-
}}
}}

Latest revision as of 13:10, 7 September 2012

Full Name: CNhs10633_bl_f0

Motif matrix
POACGT
11013.6299959557218124.72516089178784968.2148795286259183.76505225411586
2990.91005154424918.492958822169691112.7895955664872168.1424826973455
3800.4556330648894434.17864232770941035.351297276301220.349515961350743
41878.79693905950580.0403.41401399823088.124135572516005
5522.0975450206986374.772741459692841390.90372269791122.5610794519488684
62288.2301132991750.00.02.1049753310754746
70.00.02289.0097068600991.3253817701516528
8796.802074267206148.6138140582750541380.837492941528464.08170736324233
92174.98737632308592.7665993303997422.5811129767672330.0
101618.3925131237790.0662.85177808151179.090797424959742
11841.5952670628224137.31339909410891283.722198510711527.704223962609618
12925.7191612752049341.1870908825082358.1343297412291665.2945067313083

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPIB#MA0081.1-30.0001331350.06337230.1083187AGGAGAGGAAGAAGAGGAA+
Trl#MA0205.100.0002280990.1085750.10831810AGGAGAGGAAGAGAGAGAGCAA-
Klf4#MA0039.1-20.001250010.5950040.39573110AGGAGAGGAAGATAAAGGAAGG+
id1#MA0120.110.001964290.9350.46639411AGGAGAGGAAGACGAAAAGGAAAA-
SPI1#MA0080.2-50.002920181.390.5325957AGGAGAGGAAGAAGGAAGT+
ELF5#MA0136.1-40.003364651.601570.5325958AGGAGAGGAAGAAAGGAAGTA-
Gata1#MA0035.2-10.00415761.979020.56409611AGGAGAGGAAGAACAGATAAGAA+
GABPA#MA0062.1-30.005016362.387790.5955369AGGAGAGGAAGAACCGGAAGAG+
AZF1#MA0277.1-10.005794862.758350.6115189AGGAGAGGAAGAAAAAAGAAA+
ETS1#MA0098.1-50.00918494.372010.692336AGGAGAGGAAGACGGAAA-
ELK1#MA0028.1-10.009379764.464770.6923310AGGAGAGGAAGAGAGCCGGAAG+
FEV#MA0156.1-40.01009264.804090.692338AGGAGAGGAAGACAGGAAAT+
HMG-I/Y#MA0045.110.01017574.843640.6923312AGGAGAGGAAGACAACAAATGGAAAAAC+
STB3#MA0390.110.01020554.85780.6923312AGGAGAGGAAGACCAGAGTGAAAAATTTTGGAC-
SFL1#MA0377.130.01208285.75140.76503912AGGAGAGGAAGATAGAGAATAGAAGAAATAAAA+
SPI1#MA0080.2-50.01532127.292910.9094586AGGAGAGGAAGACGGAAG+
PEND#MA0127.1-20.01685268.021820.94151210AGGAGAGGAAGAAATAAGAAGT-
SFP1#MA0378.1-20.02075799.880760.99763510AGGAGAGGAAGACCGTAGAAAATTTTTTTCAAT-
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