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MacroAPE 1083:CNhs11840 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;218.8959757989582;31.7418990410771;0.0;272.36728492624593!2;2.6954520217284874;2.7734608570431396;215.62705519810575;301.90919168940377!3;11...")
 
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106H5;0.801173!10827-111C8;0.430721!10789-110H6;0.417689!10828-111C9;0.171964!10788-110H5;0.201043!10792-110H9;0.360801!10765-110E9;0.368931!10829-111D1;0.00451058!10830-111D2;0.359901!10831-111D3;0.0244248!10832-111D4;0.503476!10833-111D5;0.235191!10764-110E8;0.644539!10770-110F5;0.00312115!10399-106A3;0.279148!10400-106A4;0.104953!10405-106A9;0.250031!10834-111D6;0.178196!10835-111D7;0.328959!10836-111D8;0.572372!10837-111D9;0.871937!10699-109G6;0.354646!10802-111A1;0.754296!10796-110I4;0.820257!10010-101C1;0.191141!10810-111A9;0.107791!10421-106C7;0.000897891!10708-109H6;0.303897!12235-129G3;0.190215!12236-129G4;0.658449!12237-129G5;0.809884!10167-103B5;0.531235!10151-102I7;0.278161!10428-106D5;0.701356!10795-110I3;0.236792!10805-111A4;0.596907!10052-101G7;0.176963!10189-103D9;0.0515433!10589-108D4;0.000106987!10425-106D2;0.530203!10427-106D4;0.311783!10702-109G9;0.767106!10432-106D9;0.517835!10496-107C1;0.208336!10718-109I7;0.538256!10011-101C2;0.0157625!10053-101G8;0.0972708!10686-109F2;0.0959098!10084-102B3;0.164074!10012-101C3;0.227811!10085-102B4;0.151324!10482-107A5;0.781329!10419-106C5;0.440363!10080-102A8;0.759951!10760-110E4;0.331977!10709-109H7;0.974699!10710-109H8;0.655871!10703-109H1;0.801447!10719-109I8;0.545377!10642-109A3;0.0291101!10177-103C6;0.606169!10164-103B2;0.78553!10173-103C2;0.840584!10166-103B4;0.481404!10083-102B2;0.72799!10188-103D8;0.594864!10552-107I3;0.192926!10553-107I4;0.751758!10013-101C4;0.964763!10536-107G5;0.463295!10618-108G6;0.545707!10423-106C9;0.127637!10785-110H2;0.110428!12238-129G6;0.0761798!12239-129G7;0.833688!12240-129G8;0.532752!10416-106C2;0.526615!10801-110I9;0.789249!10766-110F1;0.163304!10824-111C5;0.0329877!10825-111C6;0.817807!10826-111C7;0.723712!10454-106G4;0.806252!10409-106B4;0.474532!10638-108I8;0.260107!10636-108I6;0.0445606!10513-107D9;0.366823!10420-106C6;0.25238!10082-102B1;0.488301!10014-101C5;0.153192!10070-101I7;0.00423586!10452-106G2;0.0739234!10453-106G3;0.410558!10449-106F8;0.276896!10042-101F6;0.344622!10069-101I6;0.46297!10193-103E4;0.722127!10631-108I1;0.639096!10438-106E6;0.726646!10488-107B2;0.581093!10196-103E7;0.084864!10071-101I8;0.459599!10071-101I8;0.00174975!10041-101F5;0.456702!10451-106G1;0.00449375!10450-106F9;0.0122357!10604-108F1;0.00143927!10605-108F2;0.280055!10606-108F3;0.0733915!10603-108E9;0.154335!10497-107C2;0.148711!10448-106F7;0.44943!10643-109A4;0.813155!10426-106D3;0.355554!10431-106D8;0.573421!10197-103E8;0.448134!10443-106F2;0.170949!10815-111B5;0.474754!10816-111B6;0.233873!10817-111B7;0.317521!10015-101C6;0.173507!10410-106B5;0.0113321!10054-101G9;0.0179686!10758-110E2;0.781995!10711-109H9;0.660514!10040-101F4;0.760439!10470-106I2;0.224618!10415-106C1;0.334428!10198-103E9;0.501964!10614-108G2;0.0434861!10612-108F9;0.609686!10549-107H9;0.173032!10615-108G3;0.0563113!10487-107B1;0.675475!10433-106E1;0.601555!10688-109F4;0.358861!10444-106F3;0.722187!10444-106F3;0.909526!10485-107A8;0.967063!10413-106B8;0.900445!10175-103C4;0.783122!10161-103A8;0.528814!12131-128D7;0.443804!10624-108H3;0.0496542!10712-109I1;0.679614!10205-103F7;0.244912!10206-103F8;0.323904!10207-103F9;0.199644!10050-101G5;0.853651!10051-101G6;0.652419!10016-101C7;0.840716!10046-101G1;0.80996!10778-110G4;0.596374!10633-108I3;0.842915!10818-111B8;0.433526!10819-111B9;0.200829!10820-111C1;0.234384!10484-107A7;0.21889!10808-111A7;0.410906!10169-103B7;0.751003!10153-102I9;0.319172!13425-144D5;0.704226!13433-144E4;0.221504!13437-144E8;0.164329!11904-125F5;0.259994!11905-125F6;0.0800565!10039-101F3;0.120788!10791-110H8;0.326332!10017-101C8;0.696009!10045-101F9;0.990398!10509-107D5;0.351968!10839-111E2;0.510302!10692-109F8;0.109249!10079-102A7;0.0133552!10078-102A6;0.202497!10721-110A1;0.598019!10569-108B2;0.000511782!10570-108B3;0.496146!10571-108B4;0.178157!10647-109A8;0.462438!10752-110D5;0.399163!10782-110G8;0.710682!10726-110A6;0.93066!10018-101C9;0.643878!10086-102B5;0.657081!10182-103D2;0.332998!10165-103B3;0.590422!10499-107C4;0.344881!10408-106B3;0.273674!10019-101D1;0.0446279!10068-101I5;0.444877!10075-102A3;0.955837!10077-102A5;0.427036!10727-110A7;0.00339588!10775-110G1;0.672741!10412-106B7;0.0572185!12231-129F8;0.720552!12232-129F9;0.255489!12233-129G1;0.446766!12234-129G2;0.337539!10414-106B9;0.285679!10170-103B8;0.245727!10183-103D3;0.176012!10150-102I6;0.141844!10174-103C3;0.21988!10155-103A2;0.694015!10038-101F2;0.519645!10838-111E1;0.533276!10759-110E3;0.0390746!10514-107E1;0.916933!10465-106H6;0.285047!10691-109F7;0.0817484!10843-111E6;0.0361927!10844-111E7;0.835111!11747-123G1;0.659377!11748-123G2;0.580641!11749-123G3;0.196512!11750-123G4;0.428944!11751-123G5;0.876908!11840-124H4;0.68105!11752-123G6;0.721295!11753-123G7;0.113336!11754-123G8;0.764118!11755-123G9;0.417873!11756-123H1;0.707912!11833-124G6;0.669467!11760-123H5;0.802407!11836-124G9;0.505038!11758-123H3;0.675344!11835-124G8;0.160591!11762-123H7;0.956338!11838-124H2;0.772378!11757-123H2;0.435345!11759-123H4;0.904869!11761-123H6;0.639562!11842-124H6;0.242918!11837-124H1;0.507719!10568-108B1;0.164429!13230-141I8;0.891832!13231-141I9;0.938795!10696-109G3;0.642387!10493-107B7;0.870553!10494-107B8;0.384357!10850-111F4;0.058242!10851-111F5;0.239658!10852-111F6;0.434042!10853-111F7;0.231915!10854-111F8;0.155812!10855-111F9;0.00495618!10856-111G1;0.213879!10847-111F1;0.324321!10846-111E9;0.0642741!10848-111F2;0.074425!10845-111E8;0.415846!10857-111G2;0.508424!10858-111G3;0.703151!10156-103A3;0.679111!11901-125F2;0.260814!11902-125F3;0.659715!11903-125F4;0.846667!10689-109F5;0.730576!10648-109A9;0.40486!10784-110H1;0.380446!10744-110C6;0.921692!10772-110F7;0.496136!10474-106I6;0.261125!10600-108E6;0.37426!10684-109E9;0.211452!12226-129F3;0.682301!12227-129F4;0.604746!10508-107D4;0.605134!10539-107G8;0.928369!10607-108F4;0.736088!10555-107I6;0.0107247!10774-110F9;0.997846!10637-108I7;0.0113197!10663-109C6;0.0183525!10728-110A8;0.0855977!10729-110A9;0.034312!10430-106D7;0.617751!10730-110B1;0.754167!10813-111B3;0.775301!10812-111B2;0.585558!10037-101F1;0.506536!10172-103C1;0.381111!10163-103B1;0.27568!10076-102A4;0.25205!10073-102A1;0.24765!10036-101E9;0.727234!10195-103E6;0.454056!10277-104E7;0.225043!10434-106E2;0.81195!10550-107I1;0.931387!10545-107H5;0.560892!10544-107H4;0.346312!10704-109H2;0.412147!10510-107D6;0.279122!10558-107I9;0.297416!10020-101D2;0.363504!10732-110B3;0.438025!10049-101G4;0.104702!10698-109G5;0.975793!10437-106E5;0.23895!10417-106C3;0.736736!10035-101E8;0.288664!10171-103B9;0.287913!10157-103A4;0.226872!10034-101E7;0.2009!10072-101I9;0.379435!10199-103F1;0.898374!10200-103F2;0.344776!10697-109G4;0.064025!10723-110A3;0.277763!10179-103C8;0.242211!10160-103A7;0.247924!10180-103C9;0.314268!10162-103A9;0.53034!10021-101D3;0.83966!10840-111E3;0.915012!10706-109H4;0.740571!10033-101E6;0.23464!10032-101E5;0.23572!10490-107B4;0.31831!10439-106E7;0.0278714!10022-101D4;0.437705!10176-103C5;0.719198!10469-106I1;0.482365!10067-101I4;0.132776!10411-106B6;0.813986!10471-106I3;0.377863!10030-101E3;0.295904!10475-106I7;0.623183!10787-110H4;0.0183726!10477-106I9;0.0480147!10695-109G2;0.554251!11771-123I7;0.028491!11772-123I8;0.811754!11773-123I9;0.351168!10093-102C3;0.331876!10442-106F1;0.436634!10442-106F1;0.478267!10201-103F3;0.58758!10639-108I9;0.496955!11843-124H7;0.039844!11841-124H5;0.200868!10693-109F9;0.878293!10436-106E4;0.218033!10483-107A6;0.406798!10282-104F3;0.906969!10023-101D5;0.108914!10066-101I3;0.773337!10065-101I2;0.854488!10800-110I8;0.975688!10610-108F7;0.235875!10841-111E4;0.373986!10541-107H1;0.0733728!10842-111E5;0.350589!10562-108A4;0.0335612!10024-101D6;0.514042!10064-101I1;2.59557e-05!10609-108F6;0.089942!10048-101G3;0.474929!10781-110G7;0.342463!10181-103D1;0.673926!10159-103A6;0.580717!10056-101H2;0.543512!10737-110B8;0.924863!10025-101D7;0.946226!10044-101F8;0.0773388!10424-106D1;0.107499!10463-106H4;0.697153!10616-108G4;0.765138!10486-107A9;0.933831!10062-101H8;0.915723!10202-103F4;0.035914!10158-103A5;0.379442!10441-106E9;0.366206!10031-101E4;0.485213!10063-101H9;0.505949!10063-101H9;0.576464!11763-123H8;0.00347864!11765-123I1;0.472752!11768-123I4;0.639211!10807-111A6;0.92111!10790-110H7;0.151019!10798-110I6;0.211125!10786-110H3;0.226959!10591-108D6;0.532873!10593-108D8;0.236493!10590-108D5;0.334805!10026-101D8;0.771909!10096-102C6;0.450059!10168-103B6;0.492646!10154-103A1;0.576194!10209-103G2;0.623374!10061-101H7;0.431453!10027-101D9;0.402683!10043-101F7;0.421749!10783-110G9;0.350293!10028-101E1;0.478316!10060-101H6;0.159393!10203-103F5;0.255072!10059-101H5;0.248685!10047-101G2;0.790578!10029-101E2;0.0704117!10058-101H4;0.225908!10418-106C4;0.981272!10492-107B6;0.0572227!10694-109G1;0.195697!10797-110I5;0.370175!10057-101H3;0.213941!10100-102D1;0.356139!10055-101H1;0.988609!10204-103F6;0.477485!10191-103E2;0.723565!10563-108A5;0.00141181
|name=CNhs11840_bl_f0
|name=CNhs11840_bl_f0
|tomtom_result=AZF1#MA0277.1;-3;6.51887e-05;0.0310298;0.0496743;9;TTCCTTCTTTTT;TTTCTTTTT;-!Klf4#MA0039.1;-2;0.000104384;0.0496869;0.0496743;10;TTCCTTCTTTTT;CCTTCCTTTA;-!SFL1#MA0377.1;5;0.00225431;1.07305;0.549269;12;TTCCTTCTTTTT;TTTTATTTCTTCTATTCTCTA;-!HMG-I/Y#MA0045.1;1;0.00257282;1.22466;0.549269;12;TTCCTTCTTTTT;GTTTTTCCATTTGTTG;-!Dof2#MA0020.1;-4;0.00288555;1.37352;0.549269;6;TTCCTTCTTTTT;TGCTTT;-!PEND#MA0127.1;-2;0.00831153;3.95629;0.999747;10;TTCCTTCTTTTT;ACTTCTTATT;+!MNB1A#MA0053.1;-5;0.00985204;4.68957;0.999747;5;TTCCTTCTTTTT;GCTTT;-!TBP#MA0108.2;0;0.0105296;5.0121;0.999747;12;TTCCTTCTTTTT;CCCCGCCTTTTATAC;-!TBP#MA0108.2;0;0.0105296;5.0121;0.999747;12;TTCCTTCTTTTT;CCCCGCCTTTTATAC;-!squamosa#MA0082.1;-2;0.0183269;8.72361;0.999747;10;TTCCTTCTTTTT;ATTTCCATTTTTGG;-!id1#MA0120.1;-3;0.0196768;9.36616;0.999747;9;TTCCTTCTTTTT;TTTTCCTTTTCG;+!PBF#MA0064.1;-5;0.0205026;9.75925;0.999747;5;TTCCTTCTTTTT;GCTTT;-
}}
}}

Latest revision as of 13:12, 7 September 2012

Full Name: CNhs11840_bl_f0

Motif matrix
POACGT
1218.895975798958231.74189904107710.0272.36728492624593
22.69545202172848742.7734608570431396215.62705519810575301.90919168940377
311.392597783964012339.034500335001160.0172.5780616473158
40.0371.77637827517290.0151.2287814911083
50.00.00.0523.0051597662808
60.02.942500793322553248.43108264401428271.6315763289444
70.0350.77243357999080.0172.23272618629017
80.00.00.0523.0051597662808
90.07.185007839240439537.42292204769299478.39722987934766
100.038.641058502206680.0484.3641012640745
110.016.6447868724464854.480827980126666501.87954491370783
12206.410092068347079.14505571784171254.168719034775336253.28129294531686

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AZF1#MA0277.1-36.51887e-050.03102980.04967439TTCCTTCTTTTTTTTCTTTTT-
Klf4#MA0039.1-20.0001043840.04968690.049674310TTCCTTCTTTTTCCTTCCTTTA-
SFL1#MA0377.150.002254311.073050.54926912TTCCTTCTTTTTTTTTATTTCTTCTATTCTCTA-
HMG-I/Y#MA0045.110.002572821.224660.54926912TTCCTTCTTTTTGTTTTTCCATTTGTTG-
Dof2#MA0020.1-40.002885551.373520.5492696TTCCTTCTTTTTTGCTTT-
PEND#MA0127.1-20.008311533.956290.99974710TTCCTTCTTTTTACTTCTTATT+
MNB1A#MA0053.1-50.009852044.689570.9997475TTCCTTCTTTTTGCTTT-
TBP#MA0108.200.01052965.01210.99974712TTCCTTCTTTTTCCCCGCCTTTTATAC-
TBP#MA0108.200.01052965.01210.99974712TTCCTTCTTTTTCCCCGCCTTTTATAC-
squamosa#MA0082.1-20.01832698.723610.99974710TTCCTTCTTTTTATTTCCATTTTTGG-
id1#MA0120.1-30.01967689.366160.9997479TTCCTTCTTTTTTTTTCCTTTTCG+
PBF#MA0064.1-50.02050269.759250.9997475TTCCTTCTTTTTGCTTT-
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