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MacroAPE 1083:CNhs12105 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;83.56486594148492;111.55363748299;341.83727670503646;142.14230933753234!2;74.2482856002483;372.55410086396864;105.99863865605954;126.2970643...")
 
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11C9;0.84533!10788-110H5;0.857721!10792-110H9;0.584335!10765-110E9;0.829514!10829-111D1;0.779782!10830-111D2;0.721912!10831-111D3;0.576592!10832-111D4;0.437998!10833-111D5;0.745806!10764-110E8;0.852653!10770-110F5;0.992805!10399-106A3;0.942239!10400-106A4;0.323978!10405-106A9;0.41186!10834-111D6;0.387702!10835-111D7;0.71934!10836-111D8;0.0449698!10837-111D9;0.261178!10699-109G6;0.132199!10802-111A1;0.610459!10796-110I4;0.314554!10010-101C1;0.231276!10810-111A9;0.232011!10421-106C7;0.168843!10708-109H6;0.717508!12235-129G3;0.0916359!12236-129G4;0.376642!12237-129G5;0.235684!10167-103B5;0.405594!10151-102I7;0.728569!10428-106D5;0.683907!10795-110I3;0.854858!10805-111A4;0.622685!10052-101G7;0.063358!10189-103D9;0.238156!10589-108D4;0.0753833!10425-106D2;0.147907!10427-106D4;0.241944!10702-109G9;0.414805!10432-106D9;0.87671!10496-107C1;0.0468715!10718-109I7;0.295089!10011-101C2;0.966498!10053-101G8;0.259153!10686-109F2;0.145298!10084-102B3;0.967148!10012-101C3;0.58091!10085-102B4;0.456478!10482-107A5;0.71144!10419-106C5;0.0877108!10080-102A8;0.0941304!10760-110E4;0.654041!10709-109H7;0.145701!10710-109H8;0.146041!10703-109H1;0.335786!10719-109I8;0.57636!10642-109A3;0.588183!10177-103C6;0.990071!10164-103B2;0.734535!10173-103C2;0.707523!10166-103B4;0.55297!10083-102B2;0.575909!10188-103D8;0.516365!10552-107I3;0.611932!10553-107I4;0.0805146!10013-101C4;0.360861!10536-107G5;0.360801!10618-108G6;0.529578!10423-106C9;0.115987!10785-110H2;0.0697871!12238-129G6;0.00852055!12239-129G7;0.688435!12240-129G8;0.822121!10416-106C2;0.930134!10801-110I9;0.48736!10766-110F1;0.434623!10824-111C5;0.382524!10825-111C6;0.061155!10826-111C7;0.0517387!10454-106G4;0.046819!10409-106B4;0.0619394!10638-108I8;0.282356!10636-108I6;0.0694407!10513-107D9;0.0280146!10420-106C6;0.0739437!10082-102B1;0.164133!10014-101C5;0.226725!10070-101I7;0.0912443!10452-106G2;0.309144!10453-106G3;0.156481!10449-106F8;0.206823!10042-101F6;0.202189!10069-101I6;0.674375!10193-103E4;0.528068!10631-108I1;0.635746!10438-106E6;0.488643!10488-107B2;0.326352!10196-103E7;0.511882!10071-101I8;0.418073!10071-101I8;0.341809!10041-101F5;0.627978!10451-106G1;0.142029!10450-106F9;0.0899363!10604-108F1;0.0792192!10605-108F2;0.370323!10606-108F3;0.0920143!10603-108E9;0.335651!10497-107C2;0.147529!10448-106F7;0.0363908!10643-109A4;0.651673!10426-106D3;0.302063!10431-106D8;0.0771522!10197-103E8;0.070811!10443-106F2;0.761536!10815-111B5;0.467944!10816-111B6;0.398922!10817-111B7;0.401299!10015-101C6;0.337222!10410-106B5;0.386309!10054-101G9;0.29782!10758-110E2;0.530055!10711-109H9;0.567998!10040-101F4;0.0632958!10470-106I2;0.589696!10415-106C1;0.293814!10198-103E9;0.240403!10614-108G2;0.353014!10612-108F9;0.740688!10549-107H9;0.0717898!10615-108G3;0.0413454!10487-107B1;0.135856!10433-106E1;0.262522!10688-109F4;0.319177!10444-106F3;0.492043!10444-106F3;0.422571!10485-107A8;0.43942!10413-106B8;0.517354!10175-103C4;0.777081!10161-103A8;0.680169!12131-128D7;0.57921!10624-108H3;0.400903!10712-109I1;0.533887!10205-103F7;0.963691!10206-103F8;0.310805!10207-103F9;0.55457!10050-101G5;0.358403!10051-101G6;0.665982!10016-101C7;0.472943!10046-101G1;0.618279!10778-110G4;0.736896!10633-108I3;0.896963!10818-111B8;0.196763!10819-111B9;0.0540214!10820-111C1;0.0685466!10484-107A7;0.0573407!10808-111A7;0.169739!10169-103B7;0.368949!10153-102I9;0.8161!13425-144D5;0.680948!13433-144E4;0.254046!13437-144E8;0.422148!11904-125F5;0.37813!11905-125F6;0.725769!10039-101F3;0.74727!10791-110H8;0.586256!10017-101C8;0.261062!10045-101F9;0.546519!10509-107D5;0.584331!10839-111E2;0.29467!10692-109F8;0.201171!10079-102A7;0.0164247!10078-102A6;0.326122!10721-110A1;0.350069!10569-108B2;0.199928!10570-108B3;0.160184!10571-108B4;0.518077!10647-109A8;0.263598!10752-110D5;0.589162!10782-110G8;0.177504!10726-110A6;0.695904!10018-101C9;0.624195!10086-102B5;0.659093!10182-103D2;0.919851!10165-103B3;0.489185!10499-107C4;0.6029!10408-106B3;0.120798!10019-101D1;0.189426!10068-101I5;0.170168!10075-102A3;0.435075!10077-102A5;0.212533!10727-110A7;0.0612242!10775-110G1;0.414887!10412-106B7;0.329203!12231-129F8;0.111479!12232-129F9;0.649043!12233-129G1;0.912643!12234-129G2;0.645294!10414-106B9;0.850071!10170-103B8;0.0225141!10183-103D3;0.546156!10150-102I6;0.561055!10174-103C3;0.590787!10155-103A2;0.908935!10038-101F2;0.632963!10838-111E1;0.46906!10759-110E3;0.120231!10514-107E1;0.948316!10465-106H6;0.00887193!10691-109F7;0.129219!10843-111E6;0.0536549!10844-111E7;0.929164!11747-123G1;0.802001!11748-123G2;0.525606!11749-123G3;0.91874!11750-123G4;0.304941!11751-123G5;0.281139!11840-124H4;0.234901!11752-123G6;0.610479!11753-123G7;0.360754!11754-123G8;0.255133!11755-123G9;0.349763!11756-123H1;0.669459!11833-124G6;0.803802!11760-123H5;0.623088!11836-124G9;0.984209!11758-123H3;0.422365!11835-124G8;0.591296!11762-123H7;0.678736!11838-124H2;0.511718!11757-123H2;0.915742!11759-123H4;0.637189!11761-123H6;0.724465!11842-124H6;0.581737!11837-124H1;0.63134!10568-108B1;0.599282!13230-141I8;0.236231!13231-141I9;0.705551!10696-109G3;0.639792!10493-107B7;0.560968!10494-107B8;0.0380913!10850-111F4;0.180625!10851-111F5;0.0321639!10852-111F6;0.166458!10853-111F7;0.339699!10854-111F8;0.841186!10855-111F9;0.576999!10856-111G1;0.305842!10847-111F1;0.947448!10846-111E9;0.793677!10848-111F2;0.336108!10845-111E8;0.869421!10857-111G2;0.740877!10858-111G3;0.516227!10156-103A3;0.475626!11901-125F2;0.58826!11902-125F3;0.555617!11903-125F4;0.414093!10689-109F5;0.690731!10648-109A9;0.00100848!10784-110H1;0.525542!10744-110C6;0.0432814!10772-110F7;0.750464!10474-106I6;0.428437!10600-108E6;0.70145!10684-109E9;0.903341!12226-129F3;0.600442!12227-129F4;0.255271!10508-107D4;0.440844!10539-107G8;0.871382!10607-108F4;0.847788!10555-107I6;0.30339!10774-110F9;0.850297!10637-108I7;0.186496!10663-109C6;0.952458!10728-110A8;0.432664!10729-110A9;0.322506!10430-106D7;0.703672!10730-110B1;0.720923!10813-111B3;0.676732!10812-111B2;0.690633!10037-101F1;0.94291!10172-103C1;0.583031!10163-103B1;0.721376!10076-102A4;0.575328!10073-102A1;0.549121!10036-101E9;0.677335!10195-103E6;0.502925!10277-104E7;0.623577!10434-106E2;0.584802!10550-107I1;0.20445!10545-107H5;0.443592!10544-107H4;0.460654!10704-109H2;0.202193!10510-107D6;0.310863!10558-107I9;0.0266672!10020-101D2;0.10933!10732-110B3;0.392812!10049-101G4;0.571277!10698-109G5;0.679373!10437-106E5;0.117879!10417-106C3;0.932137!10035-101E8;0.214231!10171-103B9;0.546562!10157-103A4;0.665572!10034-101E7;0.534603!10072-101I9;0.547855!10199-103F1;0.680189!10200-103F2;0.65006!10697-109G4;0.203103!10723-110A3;0.947886!10179-103C8;0.613396!10160-103A7;0.501823!10180-103C9;0.727869!10162-103A9;0.599442!10021-101D3;0.773003!10840-111E3;0.849545!10706-109H4;0.777214!10033-101E6;0.375991!10032-101E5;0.488225!10490-107B4;0.504135!10439-106E7;0.339628!10022-101D4;0.06068!10176-103C5;0.383174!10469-106I1;0.698721!10067-101I4;0.00457604!10411-106B6;0.647753!10471-106I3;0.669878!10030-101E3;0.960113!10475-106I7;0.567644!10787-110H4;0.303661!10477-106I9;0.110271!10695-109G2;0.416978!11771-123I7;0.710077!11772-123I8;0.858735!11773-123I9;0.866041!10093-102C3;0.924032!10442-106F1;0.935509!10442-106F1;0.360203!10201-103F3;0.58144!10639-108I9;0.312419!11843-124H7;0.224231!11841-124H5;0.677947!10693-109F9;0.961687!10436-106E4;0.827146!10483-107A6;0.0843887!10282-104F3;0.164359!10023-101D5;0.745971!10066-101I3;0.70035!10065-101I2;0.772083!10800-110I8;0.790386!10610-108F7;0.243067!10841-111E4;0.783857!10541-107H1;0.244399!10842-111E5;0.0935203!10562-108A4;0.449191!10024-101D6;0.337362!10064-101I1;0.011313!10609-108F6;0.281205!10048-101G3;0.204115!10781-110G7;0.221334!10181-103D1;0.1871!10159-103A6;0.511271!10056-101H2;0.606224!10737-110B8;0.644828!10025-101D7;0.948765!10044-101F8;0.0136141!10424-106D1;0.145892!10463-106H4;0.679517!10616-108G4;0.0663981!10486-107A9;0.280614!10062-101H8;0.199371!10202-103F4;0.352562!10158-103A5;0.413359!10441-106E9;0.439034!10031-101E4;0.0741063!10063-101H9;0.541514!10063-101H9;0.782385!11763-123H8;0.129758!11765-123I1;0.535879!11768-123I4;0.803686!10807-111A6;0.998552!10790-110H7;0.0759091!10798-110I6;0.114225!10786-110H3;0.156713!10591-108D6;0.0310222!10593-108D8;0.188615!10590-108D5;0.216756!10026-101D8;0.0598396!10096-102C6;0.632519!10168-103B6;0.797864!10154-103A1;0.621364!10209-103G2;0.585422!10061-101H7;0.417614!10027-101D9;0.75212!10043-101F7;0.348839!10783-110G9;0.262658!10028-101E1;0.308824!10060-101H6;0.943461!10203-103F5;0.733016!10059-101H5;0.464165!10047-101G2;0.771367!10029-101E2;0.209881!10058-101H4;0.332107!10418-106C4;0.560475!10492-107B6;0.588212!10694-109G1;0.187831!10797-110I5;0.786846!10057-101H3;0.211934!10100-102D1;0.769879!10055-101H1;0.520363!10204-103F6;0.616135!10191-103E2;0.388773!10563-108A5;0.0533748
|name=CNhs12105_bl_f2
|name=CNhs12105_bl_f2
|tomtom_result=PHD1#MA0355.1;-2;0.00513112;2.44241;0.75512;10;GCCTGTGCATCT;TGCTGCAGGT;-!HIF1A::ARNT#MA0259.1;0;0.0071099;3.38431;0.75512;8;GCCTGTGCATCT;GGACGTGC;+!TP53#MA0106.1;8;0.00747541;3.5583;0.75512;12;GCCTGTGCATCT;CCGGACATGCCCGGGCATGT;+!PHO4#MA0357.1;0;0.00752759;3.58313;0.75512;8;GCCTGTGCATCT;GCACGTGC;+!Zfx#MA0146.1;3;0.0082011;3.90372;0.75512;11;GCCTGTGCATCT;GGGGCCGAGGCCTG;+!h#MA0449.1;1;0.00836445;3.98148;0.75512;9;GCCTGTGCATCT;GGCACGTGCC;+!SOK2#MA0385.1;-1;0.00873885;4.15969;0.75512;11;GCCTGTGCATCT;TGCCTGCAGGT;-!RTG3#MA0376.1;6;0.0112288;5.34491;0.865634;12;GCCTGTGCATCT;ATATTAGCACGTGCTTAGTC;+!MET28#MA0332.1;-2;0.0118392;5.63547;0.865634;6;GCCTGTGCATCT;CTGTGG;+!INO2#MA0321.1;0;0.0130555;6.2144;0.886377;9;GCCTGTGCATCT;GCATGTGAA;+!RUNX1#MA0002.2;0;0.0157687;7.5059;0.919175;11;GCCTGTGCATCT;GTCTGTGGTTT;+!INO4#MA0322.1;0;0.0160409;7.63548;0.919175;9;GCCTGTGCATCT;GCATGTGAA;+!Ar#MA0007.1;9;0.0186248;8.86541;0.919175;12;GCCTGTGCATCT;ATAAGAACACCCTGTACCCGCC;+!CBF1#MA0281.1;0;0.0190643;9.07461;0.919175;8;GCCTGTGCATCT;TCACGTGC;-!HNF4A#MA0114.1;2;0.0193408;9.20621;0.919175;11;GCCTGTGCATCT;TGACCTTTGGCCT;-!abi4#MA0123.1;-2;0.0206804;9.84388;0.936041;10;GCCTGTGCATCT;CGGTGCCCCC;+
}}
}}

Latest revision as of 13:53, 7 September 2012

Full Name: CNhs12105_bl_f2

Motif matrix
POACGT
183.56486594148492111.55363748299341.83727670503646142.14230933753234
274.2482856002483372.55410086396864105.99863865605954126.29706434676739
327.58447477786908546.972412058077725.86943493700166778.67176769409483
445.68494466094768236.5792533045540243.752193308873544353.0816981926687
510.50736086118179117.144201975941247634.190127958767417.256398671153367
650.7284040404067628.3581065660571192.3372056775419507.674373183038
714.55720710238596319.069269011807506620.214248046399925.257365306450538
8109.9177149697519517.813359030602230.08881594023960621.278199526449384
9331.3148126089872284.4296105885989627.27586210012225436.077804169335344
1057.414510009796934.26904430689038247.6961289428278339.7184062075285
1146.78434570282528550.719863442812446.4084708696043435.18540945180137
12272.171310994516940.16746723490082639.75326922427157327.0060420133546

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PHD1#MA0355.1-20.005131122.442410.7551210GCCTGTGCATCTTGCTGCAGGT-
HIF1A::ARNT#MA0259.100.00710993.384310.755128GCCTGTGCATCTGGACGTGC+
TP53#MA0106.180.007475413.55830.7551212GCCTGTGCATCTCCGGACATGCCCGGGCATGT+
PHO4#MA0357.100.007527593.583130.755128GCCTGTGCATCTGCACGTGC+
Zfx#MA0146.130.00820113.903720.7551211GCCTGTGCATCTGGGGCCGAGGCCTG+
h#MA0449.110.008364453.981480.755129GCCTGTGCATCTGGCACGTGCC+
SOK2#MA0385.1-10.008738854.159690.7551211GCCTGTGCATCTTGCCTGCAGGT-
RTG3#MA0376.160.01122885.344910.86563412GCCTGTGCATCTATATTAGCACGTGCTTAGTC+
MET28#MA0332.1-20.01183925.635470.8656346GCCTGTGCATCTCTGTGG+
INO2#MA0321.100.01305556.21440.8863779GCCTGTGCATCTGCATGTGAA+
RUNX1#MA0002.200.01576877.50590.91917511GCCTGTGCATCTGTCTGTGGTTT+
INO4#MA0322.100.01604097.635480.9191759GCCTGTGCATCTGCATGTGAA+
Ar#MA0007.190.01862488.865410.91917512GCCTGTGCATCTATAAGAACACCCTGTACCCGCC+
CBF1#MA0281.100.01906439.074610.9191758GCCTGTGCATCTTCACGTGC-
HNF4A#MA0114.120.01934089.206210.91917511GCCTGTGCATCTTGACCTTTGGCCT-
abi4#MA0123.1-20.02068049.843880.93604110GCCTGTGCATCTCGGTGCCCCC+
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