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MacroAPE 1083:Motif TTCANG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;11152!02;0;0;0;11152!03;0;11152;0;0!04;11152;0;0;0!05;2788;2788;2788;2788!06;0;0;11152;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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5;0.376433!10792-110H9;0.415282!10765-110E9;0.150425!10829-111D1;0.170773!10830-111D2;0.231789!10831-111D3;0.351337!10832-111D4;0.40049!10833-111D5;0.490495!10764-110E8;0.370761!10770-110F5;0.629813!10399-106A3;0.539743!10400-106A4;0.136601!10405-106A9;0.101422!10834-111D6;0.204085!10835-111D7;0.563838!10836-111D8;0.640838!10837-111D9;0.366004!10699-109G6;0.960137!10802-111A1;0.160344!10796-110I4;0.514898!10010-101C1;0.378556!10810-111A9;0.944594!10421-106C7;0.921459!10708-109H6;0.632525!12235-129G3;0.57665!12236-129G4;0.747422!12237-129G5;0.285482!10167-103B5;0.823138!10151-102I7;0.586959!10428-106D5;0.395092!10795-110I3;0.856891!10805-111A4;0.67306!10052-101G7;0.317412!10189-103D9;0.952547!10589-108D4;0.421021!10425-106D2;0.959115!10427-106D4;0.766156!10702-109G9;0.637038!10432-106D9;0.994841!10496-107C1;0.366565!10718-109I7;0.754917!10011-101C2;0.502822!10053-101G8;0.971529!10686-109F2;0.92742!10084-102B3;0.383364!10012-101C3;0.47511!10085-102B4;0.429804!10482-107A5;0.78866!10419-106C5;0.466889!10080-102A8;0.802559!10760-110E4;0.985569!10709-109H7;0.491992!10710-109H8;0.724861!10703-109H1;0.754537!10719-109I8;0.408323!10642-109A3;0.516695!10177-103C6;0.717865!10164-103B2;0.57769!10173-103C2;0.336673!10166-103B4;0.21377!10083-102B2;0.28317!10188-103D8;0.283258!10552-107I3;0.320738!10553-107I4;0.768019!10013-101C4;0.185473!10536-107G5;0.64153!10618-108G6;0.284274!10423-106C9;0.318299!10785-110H2;0.656626!12238-129G6;0.631223!12239-129G7;0.527722!12240-129G8;0.499194!10416-106C2;0.864039!10801-110I9;0.524739!10766-110F1;0.234988!10824-111C5;0.701678!10825-111C6;0.92978!10826-111C7;0.815804!10454-106G4;0.775091!10409-106B4;0.646826!10638-108I8;0.410185!10636-108I6;0.668138!10513-107D9;0.738229!10420-106C6;0.374154!10082-102B1;0.858581!10014-101C5;0.365667!10070-101I7;0.511512!10452-106G2;0.678519!10453-106G3;0.347813!10449-106F8;0.4813!10042-101F6;0.52707!10069-101I6;0.544047!10193-103E4;0.910381!10631-108I1;0.502034!10438-106E6;0.623624!10488-107B2;0.91456!10196-103E7;0.979771!10071-101I8;0.742207!10071-101I8;0.491821!10041-101F5;0.571164!10451-106G1;0.628314!10450-106F9;0.953465!10604-108F1;0.363199!10605-108F2;0.58543!10606-108F3;0.906157!10603-108E9;0.792637!10497-107C2;0.81346!10448-106F7;0.605962!10643-109A4;0.621236!10426-106D3;0.835946!10431-106D8;0.525632!10197-103E8;0.896479!10443-106F2;0.497108!10815-111B5;0.276964!10816-111B6;0.757681!10817-111B7;0.832229!10015-101C6;0.821703!10410-106B5;0.491898!10054-101G9;0.100867!10758-110E2;0.744916!10711-109H9;0.0626286!10040-101F4;0.546231!10470-106I2;0.366039!10415-106C1;0.911842!10198-103E9;0.968809!10614-108G2;0.474778!10612-108F9;0.566549!10549-107H9;0.796766!10615-108G3;0.804686!10487-107B1;0.36941!10433-106E1;0.604758!10688-109F4;0.906036!10444-106F3;0.760744!10444-106F3;0.156341!10485-107A8;0.108672!10413-106B8;0.846728!10175-103C4;0.734345!10161-103A8;0.487618!12131-128D7;0.498783!10624-108H3;0.357413!10712-109I1;0.584438!10205-103F7;0.974616!10206-103F8;0.923534!10207-103F9;0.877151!10050-101G5;0.626801!10051-101G6;0.684602!10016-101C7;0.616535!10046-101G1;0.937116!10778-110G4;0.955057!10633-108I3;0.979294!10818-111B8;0.25582!10819-111B9;0.442528!10820-111C1;0.484856!10484-107A7;0.489059!10808-111A7;0.724275!10169-103B7;0.907107!10153-102I9;0.429651!13425-144D5;0.420401!13433-144E4;0.589191!13437-144E8;0.654194!11904-125F5;0.689967!11905-125F6;0.99151!10039-101F3;0.201787!10791-110H8;0.360332!10017-101C8;0.135465!10045-101F9;0.810357!10509-107D5;0.890934!10839-111E2;0.945935!10692-109F8;0.357927!10079-102A7;0.477835!10078-102A6;0.80701!10721-110A1;0.563974!10569-108B2;0.27263!10570-108B3;0.620396!10571-108B4;0.269667!10647-109A8;0.349308!10752-110D5;0.733065!10782-110G8;0.812694!10726-110A6;0.0230061!10018-101C9;0.740012!10086-102B5;0.210683!10182-103D2;0.0219359!10165-103B3;0.528325!10499-107C4;0.490187!10408-106B3;0.58441!10019-101D1;0.611441!10068-101I5;0.193395!10075-102A3;0.523659!10077-102A5;0.320986!10727-110A7;0.591679!10775-110G1;0.889382!10412-106B7;0.400695!12231-129F8;0.104712!12232-129F9;0.602589!12233-129G1;0.83396!12234-129G2;0.968327!10414-106B9;0.988457!10170-103B8;0.347936!10183-103D3;0.425642!10150-102I6;0.446274!10174-103C3;0.36694!10155-103A2;0.516501!10038-101F2;0.535811!10838-111E1;0.540275!10759-110E3;0.621336!10514-107E1;0.424617!10465-106H6;0.560483!10691-109F7;0.919654!10843-111E6;0.631124!10844-111E7;0.214561!11747-123G1;0.312422!11748-123G2;0.975416!11749-123G3;0.922608!11750-123G4;0.699305!11751-123G5;0.236494!11840-124H4;0.180734!11752-123G6;0.197683!11753-123G7;0.980059!11754-123G8;0.914593!11755-123G9;0.262199!11756-123H1;0.558413!11833-124G6;0.823011!11760-123H5;0.12684!11836-124G9;0.84525!11758-123H3;0.524975!11835-124G8;0.45338!11762-123H7;0.560455!11838-124H2;0.588041!11757-123H2;0.240286!11759-123H4;0.305137!11761-123H6;0.517115!11842-124H6;0.670586!11837-124H1;0.848316!10568-108B1;0.575064!13230-141I8;0.552896!13231-141I9;0.452783!10696-109G3;0.433125!10493-107B7;0.433665!10494-107B8;0.882653!10850-111F4;0.940936!10851-111F5;0.662362!10852-111F6;0.660773!10853-111F7;0.10009!10854-111F8;0.280331!10855-111F9;0.551772!10856-111G1;0.669947!10847-111F1;0.574467!10846-111E9;0.114442!10848-111F2;0.614694!10845-111E8;0.511435!10857-111G2;0.807854!10858-111G3;0.856642!10156-103A3;0.664919!11901-125F2;0.356556!11902-125F3;0.962474!11903-125F4;0.74846!10689-109F5;0.823495!10648-109A9;0.186193!10784-110H1;0.932409!10744-110C6;0.573877!10772-110F7;0.84921!10474-106I6;0.64454!10600-108E6;0.987062!10684-109E9;0.796126!12226-129F3;0.29455!12227-129F4;0.42796!10508-107D4;0.775017!10539-107G8;0.748427!10607-108F4;0.782679!10555-107I6;0.192706!10774-110F9;0.579398!10637-108I7;0.387614!10663-109C6;0.429504!10728-110A8;0.743541!10729-110A9;0.651252!10430-106D7;0.853597!10730-110B1;0.778297!10813-111B3;0.814165!10812-111B2;0.157065!10037-101F1;0.480138!10172-103C1;0.400989!10163-103B1;0.445786!10076-102A4;0.302054!10073-102A1;0.314935!10036-101E9;0.551023!10195-103E6;0.2494!10277-104E7;0.439154!10434-106E2;0.420148!10550-107I1;0.376344!10545-107H5;0.444396!10544-107H4;0.0663124!10704-109H2;0.526075!10510-107D6;0.118788!10558-107I9;0.723607!10020-101D2;0.761866!10732-110B3;0.935929!10049-101G4;0.754788!10698-109G5;0.30307!10437-106E5;0.936278!10417-106C3;0.62457!10035-101E8;0.662762!10171-103B9;0.343567!10157-103A4;0.446091!10034-101E7;0.368856!10072-101I9;0.351427!10199-103F1;0.444892!10200-103F2;0.799876!10697-109G4;0.698913!10723-110A3;0.545602!10179-103C8;0.545264!10160-103A7;0.490831!10180-103C9;0.473095!10162-103A9;0.747791!10021-101D3;0.429203!10840-111E3;0.781996!10706-109H4;0.664757!10033-101E6;0.963416!10032-101E5;0.530714!10490-107B4;0.344056!10439-106E7;0.680359!10022-101D4;0.917339!10176-103C5;0.957975!10469-106I1;0.44715!10067-101I4;0.409268!10411-106B6;0.662322!10471-106I3;0.915441!10030-101E3;0.637504!10475-106I7;0.416398!10787-110H4;0.521539!10477-106I9;0.351436!10695-109G2;0.723294!11771-123I7;0.0483856!11772-123I8;0.00104622!11773-123I9;0.000125316!10093-102C3;0.387775!10442-106F1;0.835618!10442-106F1;0.00387653!10201-103F3;0.008652!10639-108I9;0.633517!11843-124H7;0.386205!11841-124H5;0.985646!10693-109F9;0.77048!10436-106E4;0.710661!10483-107A6;0.985489!10282-104F3;0.466104!10023-101D5;0.530189!10066-101I3;0.688442!10065-101I2;0.836175!10800-110I8;0.544246!10610-108F7;0.599605!10841-111E4;0.255534!10541-107H1;0.627148!10842-111E5;0.738563!10562-108A4;0.706782!10024-101D6;0.989506!10064-101I1;0.286067!10609-108F6;0.597981!10048-101G3;0.767664!10781-110G7;0.92006!10181-103D1;0.776161!10159-103A6;0.914321!10056-101H2;0.84005!10737-110B8;0.869926!10025-101D7;0.592696!10044-101F8;0.441638!10424-106D1;0.437104!10463-106H4;0.683288!10616-108G4;0.554625!10486-107A9;0.843716!10062-101H8;0.899101!10202-103F4;0.388533!10158-103A5;0.801882!10441-106E9;0.674913!10031-101E4;0.718546!10063-101H9;0.305166!10063-101H9;0.459503!11763-123H8;0.392254!11765-123I1;0.180158!11768-123I4;0.0576977!10807-111A6;0.137117!10790-110H7;0.884182!10798-110I6;0.581222!10786-110H3;0.784322!10591-108D6;0.971396!10593-108D8;0.615519!10590-108D5;0.293722!10026-101D8;0.803824!10096-102C6;0.746061!10168-103B6;0.359506!10154-103A1;0.578297!10209-103G2;0.530637!10061-101H7;0.63554!10027-101D9;0.85357!10043-101F7;0.415843!10783-110G9;0.336184!10028-101E1;0.858797!10060-101H6;0.346828!10203-103F5;0.392115!10059-101H5;0.388096!10047-101G2;0.439897!10029-101E2;0.730438!10058-101H4;0.736837!10418-106C4;0.807304!10492-107B6;0.970212!10694-109G1;0.443647!10797-110I5;0.611052!10057-101H3;0.692713!10100-102D1;0.84113!10055-101H1;0.806611!10204-103F6;0.503765!10191-103E2;0.964065!10563-108A5;0.721134
|name=motif_TTCANG
|name=motif_TTCANG
|tomtom_result=ARR1#MA0274.1;1;0.00301826;1.43669;1;6;TTCAAG;ATTCAAGT;-!Pax6#MA0069.1;0;0.00354427;1.68707;1;6;TTCAAG;TTCACGCATGAGTT;+!vnd#MA0253.1;1;0.00615394;2.92928;1;6;TTCAAG;TTTCAAGTG;+!USV1#MA0413.1;6;0.00682979;3.25098;1;6;TTCAAG;CACAAATTCAGGGGGAATTT;-!ceh-22#MA0264.1;1;0.0103942;4.94763;1;6;TTCAAG;TTTCAAGTGGT;-!RXR::RAR_DR5#MA0159.1;2;0.0191005;9.09183;1;6;TTCAAG;AGGTCATGGAGAGGTCA;+!tin#MA0247.1;0;0.0208608;9.92974;1;6;TTCAAG;CTCAAGTG;+
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: motif_TTCANG

Motif matrix
POACGT
0100011152
0200011152
0301115200
0411152000
052788278827882788
0600111520

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARR1#MA0274.110.003018261.4366916TTCAAGATTCAAGT-
Pax6#MA0069.100.003544271.6870716TTCAAGTTCACGCATGAGTT+
vnd#MA0253.110.006153942.9292816TTCAAGTTTCAAGTG+
USV1#MA0413.160.006829793.2509816TTCAAGCACAAATTCAGGGGGAATTT-
ceh-22#MA0264.110.01039424.9476316TTCAAGTTTCAAGTGGT-
RXR::RAR_DR5#MA0159.120.01910059.0918316TTCAAGAGGTCATGGAGAGGTCA+
tin#MA0247.100.02086089.9297416TTCAAGCTCAAGTG+
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