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MacroAPE 1083:Motif517: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;11065;0;22229;70747!02;0;104041;0;0!03;0;95515;0;8526!04;0;0;0;104041!05;2472;83441;9889;8239!06;12856;0;5889;85296!07;0;0;104041;0 |macro...")
 
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!10717-109I6;0.355312!10455-106G5;0.00606399!10534-107G3;0.235045!10429-106D6;0.0525755!10464-106H5;0.192018!10827-111C8;0.120083!10789-110H6;0.587172!10828-111C9;0.865823!10788-110H5;0.357153!10792-110H9;0.0980522!10765-110E9;0.319289!10829-111D1;0.591958!10830-111D2;0.177736!10831-111D3;0.54826!10832-111D4;0.879243!10833-111D5;0.263533!10764-110E8;0.157138!10770-110F5;0.611626!10399-106A3;0.64896!10400-106A4;0.221636!10405-106A9;0.402042!10834-111D6;0.277686!10835-111D7;0.372542!10836-111D8;0.0652284!10837-111D9;0.10398!10699-109G6;0.102611!10802-111A1;0.791213!10796-110I4;0.366235!10010-101C1;0.031664!10810-111A9;0.0140196!10421-106C7;0.0484895!10708-109H6;0.19886!12235-129G3;0.17758!12236-129G4;0.381024!12237-129G5;0.101917!10167-103B5;0.202293!10151-102I7;0.6509!10428-106D5;0.552379!10795-110I3;0.756212!10805-111A4;0.646382!10052-101G7;0.0454577!10189-103D9;0.0918489!10589-108D4;0.0094215!10425-106D2;0.0201879!10427-106D4;0.0145181!10702-109G9;0.644704!10432-106D9;0.209695!10496-107C1;0.125831!10718-109I7;0.0471115!10011-101C2;0.270747!10053-101G8;0.0688297!10686-109F2;0.0373309!10084-102B3;0.0289798!10012-101C3;0.443541!10085-102B4;0.379808!10482-107A5;0.970361!10419-106C5;0.0133871!10080-102A8;0.00140837!10760-110E4;0.0777186!10709-109H7;0.00855052!10710-109H8;0.0365328!10703-109H1;0.0457959!10719-109I8;0.0013639!10642-109A3;0.278242!10177-103C6;0.242901!10164-103B2;0.518463!10173-103C2;0.52126!10166-103B4;0.431314!10083-102B2;0.360084!10188-103D8;0.276238!10552-107I3;0.318486!10553-107I4;0.0862967!10013-101C4;0.00119725!10536-107G5;0.30988!10618-108G6;0.691015!10423-106C9;0.025904!10785-110H2;0.061871!12238-129G6;0.0687223!12239-129G7;0.563!12240-129G8;0.625401!10416-106C2;0.41642!10801-110I9;0.363708!10766-110F1;0.668401!10824-111C5;0.29314!10825-111C6;0.177136!10826-111C7;0.196663!10454-106G4;0.276045!10409-106B4;0.0511477!10638-108I8;0.201846!10636-108I6;0.0090944!10513-107D9;0.0194752!10420-106C6;0.116299!10082-102B1;0.0949804!10014-101C5;0.0779596!10070-101I7;0.0539848!10452-106G2;0.0930733!10453-106G3;0.222752!10449-106F8;0.168254!10042-101F6;0.14371!10069-101I6;0.222688!10193-103E4;0.219454!10631-108I1;0.399138!10438-106E6;0.111911!10488-107B2;0.00269125!10196-103E7;0.064535!10071-101I8;0.656615!10071-101I8;0.164517!10041-101F5;0.971374!10451-106G1;0.0166968!10450-106F9;0.0150137!10604-108F1;0.0134507!10605-108F2;0.0492695!10606-108F3;0.101431!10603-108E9;0.0925201!10497-107C2;0.169126!10448-106F7;0.00973052!10643-109A4;0.107932!10426-106D3;0.0304233!10431-106D8;0.00553648!10197-103E8;0.0142289!10443-106F2;0.247801!10815-111B5;0.976755!10816-111B6;0.0894698!10817-111B7;0.0692363!10015-101C6;0.0920022!10410-106B5;0.127059!10054-101G9;0.13599!10758-110E2;0.261475!10711-109H9;0.536928!10040-101F4;0.175487!10470-106I2;0.499946!10415-106C1;0.00570462!10198-103E9;0.255496!10614-108G2;0.10154!10612-108F9;0.0360364!10549-107H9;0.00314856!10615-108G3;0.0810314!10487-107B1;0.0415406!10433-106E1;0.0577771!10688-109F4;0.291183!10444-106F3;0.0335034!10444-106F3;0.370574!10485-107A8;0.30064!10413-106B8;0.187118!10175-103C4;0.58714!10161-103A8;0.449519!12131-128D7;0.274023!10624-108H3;0.842775!10712-109I1;6.65108e-05!10205-103F7;0.258946!10206-103F8;0.0600672!10207-103F9;0.0611169!10050-101G5;0.00553718!10051-101G6;0.563665!10016-101C7;0.122159!10046-101G1;0.0485379!10778-110G4;0.145599!10633-108I3;0.0505299!10818-111B8;0.249002!10819-111B9;0.207288!10820-111C1;0.235245!10484-107A7;0.230819!10808-111A7;0.0172817!10169-103B7;0.247601!10153-102I9;0.520483!13425-144D5;0.458001!13433-144E4;0.0115309!13437-144E8;0.0152468!11904-125F5;0.0239684!11905-125F6;0.133874!10039-101F3;0.844359!10791-110H8;0.516854!10017-101C8;0.000401414!10045-101F9;0.308353!10509-107D5;0.48373!10839-111E2;0.354012!10692-109F8;0.0192648!10079-102A7;0.0212377!10078-102A6;0.100254!10721-110A1;0.0729986!10569-108B2;0.0994334!10570-108B3;0.907649!10571-108B4;0.441929!10647-109A8;0.753071!10752-110D5;0.110806!10782-110G8;0.0467443!10726-110A6;0.614983!10018-101C9;0.0492079!10086-102B5;0.106026!10182-103D2;0.177794!10165-103B3;0.3119!10499-107C4;0.296242!10408-106B3;0.115285!10019-101D1;0.0285262!10068-101I5;0.0274957!10075-102A3;0.0503315!10077-102A5;0.0483548!10727-110A7;0.0027209!10775-110G1;0.296713!10412-106B7;0.514845!12231-129F8;0.000196095!12232-129F9;0.686972!12233-129G1;0.32261!12234-129G2;0.438159!10414-106B9;0.925353!10170-103B8;0.0110541!10183-103D3;0.619219!10150-102I6;0.554965!10174-103C3;0.491295!10155-103A2;0.188677!10038-101F2;0.149774!10838-111E1;0.223859!10759-110E3;0.0367239!10514-107E1;0.00983934!10465-106H6;0.221134!10691-109F7;0.30469!10843-111E6;0.259457!10844-111E7;0.0213546!11747-123G1;0.0300276!11748-123G2;0.850789!11749-123G3;0.836686!11750-123G4;0.562709!11751-123G5;0.147663!11840-124H4;0.0847892!11752-123G6;0.228042!11753-123G7;0.380968!11754-123G8;0.468784!11755-123G9;0.23413!11756-123H1;0.221046!11833-124G6;0.375443!11760-123H5;0.661799!11836-124G9;0.875967!11758-123H3;0.763924!11835-124G8;0.466772!11762-123H7;0.609803!11838-124H2;0.559101!11757-123H2;0.627584!11759-123H4;0.341868!11761-123H6;0.161725!11842-124H6;0.519643!11837-124H1;0.902709!10568-108B1;0.483947!13230-141I8;0.718434!13231-141I9;0.30796!10696-109G3;0.395203!10493-107B7;0.849485!10494-107B8;0.297934!10850-111F4;0.215389!10851-111F5;0.0210412!10852-111F6;0.0240023!10853-111F7;0.012572!10854-111F8;0.1294!10855-111F9;0.0757833!10856-111G1;0.925381!10847-111F1;0.169637!10846-111E9;0.416587!10848-111F2;0.289192!10845-111E8;0.0836321!10857-111G2;0.0826485!10858-111G3;0.105109!10156-103A3;0.0235288!11901-125F2;0.495202!11902-125F3;0.346273!11903-125F4;0.45915!10689-109F5;0.503953!10648-109A9;0.00656335!10784-110H1;0.136098!10744-110C6;0.10655!10772-110F7;0.646893!10474-106I6;0.0787755!10600-108E6;0.805746!10684-109E9;0.669855!12226-129F3;0.890529!12227-129F4;0.00485818!10508-107D4;0.771859!10539-107G8;0.299232!10607-108F4;0.212618!10555-107I6;0.0915511!10774-110F9;0.322078!10637-108I7;0.0660177!10663-109C6;0.370235!10728-110A8;0.329843!10729-110A9;0.0850987!10430-106D7;0.263669!10730-110B1;0.103205!10813-111B3;0.126364!10812-111B2;0.544269!10037-101F1;0.284581!10172-103C1;0.450469!10163-103B1;0.594272!10076-102A4;0.437683!10073-102A1;0.480682!10036-101E9;0.953706!10195-103E6;0.471355!10277-104E7;0.414409!10434-106E2;0.271646!10550-107I1;0.00978851!10545-107H5;0.00448434!10544-107H4;0.00183448!10704-109H2;0.0172737!10510-107D6;0.949136!10558-107I9;0.201722!10020-101D2;0.0450242!10732-110B3;0.0655775!10049-101G4;0.20682!10698-109G5;0.335155!10437-106E5;0.0800811!10417-106C3;0.0763376!10035-101E8;0.104205!10171-103B9;0.449311!10157-103A4;0.591328!10034-101E7;0.473737!10072-101I9;0.468806!10199-103F1;0.953927!10200-103F2;0.947591!10697-109G4;0.118115!10723-110A3;0.214386!10179-103C8;0.00233801!10160-103A7;0.153263!10180-103C9;0.188596!10162-103A9;0.665045!10021-101D3;0.553986!10840-111E3;0.138622!10706-109H4;0.645722!10033-101E6;0.387509!10032-101E5;0.265468!10490-107B4;0.464243!10439-106E7;0.0981094!10022-101D4;0.0110699!10176-103C5;0.118805!10469-106I1;0.551698!10067-101I4;0.066536!10411-106B6;0.212894!10471-106I3;0.669953!10030-101E3;0.0179714!10475-106I7;0.104265!10787-110H4;0.203193!10477-106I9;0.102828!10695-109G2;0.114119!11771-123I7;0.429898!11772-123I8;0.0109943!11773-123I9;0.0262335!10093-102C3;0.109039!10442-106F1;0.866162!10442-106F1;0.23709!10201-103F3;0.226799!10639-108I9;0.912577!11843-124H7;0.0143932!11841-124H5;0.0397897!10693-109F9;0.0104963!10436-106E4;0.023167!10483-107A6;0.0335578!10282-104F3;0.113748!10023-101D5;0.338652!10066-101I3;0.0839264!10065-101I2;0.233303!10800-110I8;0.304206!10610-108F7;0.0269194!10841-111E4;0.0176419!10541-107H1;0.063175!10842-111E5;0.0146312!10562-108A4;0.0914554!10024-101D6;0.0030566!10064-101I1;0.0457114!10609-108F6;0.0524983!10048-101G3;0.0168908!10781-110G7;0.0956781!10181-103D1;0.0480109!10159-103A6;0.223438!10056-101H2;0.182209!10737-110B8;0.341212!10025-101D7;0.185105!10044-101F8;0.00171221!10424-106D1;0.013875!10463-106H4;0.488018!10616-108G4;0.00195357!10486-107A9;0.0658976!10062-101H8;0.0739306!10202-103F4;0.263112!10158-103A5;0.385621!10441-106E9;0.175359!10031-101E4;0.180232!10063-101H9;0.433573!10063-101H9;0.878547!11763-123H8;0.153881!11765-123I1;0.48067!11768-123I4;0.144914!10807-111A6;0.3384!10790-110H7;0.262519!10798-110I6;0.0610604!10786-110H3;0.15864!10591-108D6;0.0321618!10593-108D8;0.0339738!10590-108D5;0.149094!10026-101D8;0.0147564!10096-102C6;0.504024!10168-103B6;0.0811671!10154-103A1;0.382035!10209-103G2;0.381551!10061-101H7;0.241997!10027-101D9;0.291096!10043-101F7;0.0977202!10783-110G9;0.0573604!10028-101E1;0.239554!10060-101H6;0.503868!10203-103F5;0.461443!10059-101H5;0.252711!10047-101G2;0.339461!10029-101E2;0.121496!10058-101H4;0.0857697!10418-106C4;0.296647!10492-107B6;0.00272432!10694-109G1;0.0458711!10797-110I5;0.488176!10057-101H3;0.160953!10100-102D1;0.276892!10055-101H1;0.133712!10204-103F6;0.568288!10191-103E2;0.108441!10563-108A5;0.0151835
|name=motif517
|name=motif517
|tomtom_result=TEAD1#MA0090.1;5;0.00164694;0.783944;0.725619;7;TCCTCTG;CACATTCCTCCG;+!RME1#MA0370.1;1;0.00228556;1.08793;0.725619;7;TCCTCTG;TTCCTTTGGA;-!SPIB#MA0081.1;1;0.00228662;1.08843;0.725619;6;TCCTCTG;TTCCTCT;-!REI1#MA0364.1;-1;0.00929274;4.42334;1;6;TCCTCTG;CCCCTGA;+!PPARG::RXRA#MA0065.2;2;0.018594;8.85075;1;7;TCCTCTG;TGACCTTTGCCCTAC;-
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: motif517

Motif matrix
POACGT
011106502222970747
02010404100
0309551508526
04000104041
0524728344198898239
06128560588985296
07001040410

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TEAD1#MA0090.150.001646940.7839440.7256197TCCTCTGCACATTCCTCCG+
RME1#MA0370.110.002285561.087930.7256197TCCTCTGTTCCTTTGGA-
SPIB#MA0081.110.002286621.088430.7256196TCCTCTGTTCCTCT-
REI1#MA0364.1-10.009292744.4233416TCCTCTGCCCCTGA+
PPARG::RXRA#MA0065.220.0185948.8507517TCCTCTGTGACCTTTGCCCTAC-
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