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MacroAPE 1083:Motif GNAATC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;3952;0!02;988;988;988;988!03;3952;0;0;0!04;3952;0;0;0!05;0;0;0;3952!06;0;3952;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.442862!1...")
 
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00876227!10828-111C9;0.0286039!10788-110H5;0.035725!10792-110H9;0.0082967!10765-110E9;0.000591975!10829-111D1;0.00232743!10830-111D2;0.0101535!10831-111D3;0.196682!10832-111D4;0.0715094!10833-111D5;0.0131302!10764-110E8;0.0221007!10770-110F5;0.0726582!10399-106A3;0.00594472!10400-106A4;0.0557887!10405-106A9;0.0436503!10834-111D6;0.0622808!10835-111D7;0.0191756!10836-111D8;0.0113834!10837-111D9;0.0156261!10699-109G6;0.00504681!10802-111A1;0.0607547!10796-110I4;0.0419241!10010-101C1;0.816659!10810-111A9;0.042835!10421-106C7;0.66323!10708-109H6;0.152008!12235-129G3;0.78239!12236-129G4;0.144194!12237-129G5;0.37323!10167-103B5;0.122228!10151-102I7;0.830612!10428-106D5;0.864929!10795-110I3;0.0491165!10805-111A4;0.23358!10052-101G7;0.784381!10189-103D9;0.0104985!10589-108D4;0.0112687!10425-106D2;0.685881!10427-106D4;0.144671!10702-109G9;0.349053!10432-106D9;0.764568!10496-107C1;0.399652!10718-109I7;0.773349!10011-101C2;0.0175064!10053-101G8;0.00294334!10686-109F2;0.330856!10084-102B3;0.646335!10012-101C3;0.885728!10085-102B4;0.854175!10482-107A5;0.980276!10419-106C5;0.636586!10080-102A8;0.43025!10760-110E4;5.8828e-06!10709-109H7;0.847813!10710-109H8;0.622977!10703-109H1;0.915418!10719-109I8;0.445024!10642-109A3;0.511521!10177-103C6;0.81845!10164-103B2;0.790006!10173-103C2;0.973648!10166-103B4;0.55208!10083-102B2;0.523724!10188-103D8;0.682328!10552-107I3;0.645616!10553-107I4;0.771383!10013-101C4;0.469436!10536-107G5;0.00534534!10618-108G6;0.709565!10423-106C9;0.665629!10785-110H2;0.705856!12238-129G6;0.497367!12239-129G7;0.00672515!12240-129G8;0.330264!10416-106C2;0.00155141!10801-110I9;0.0111857!10766-110F1;0.0220553!10824-111C5;0.0112519!10825-111C6;0.0348987!10826-111C7;0.046379!10454-106G4;0.0484628!10409-106B4;0.0262016!10638-108I8;0.050327!10636-108I6;0.894447!10513-107D9;0.722756!10420-106C6;0.882882!10082-102B1;0.306596!10014-101C5;0.0536169!10070-101I7;0.00601682!10452-106G2;0.019972!10453-106G3;0.487417!10449-106F8;0.348909!10042-101F6;0.349533!10069-101I6;0.853166!10193-103E4;0.323214!10631-108I1;0.689265!10438-106E6;0.0316638!10488-107B2;0.810777!10196-103E7;0.803177!10071-101I8;0.0874739!10071-101I8;0.175804!10041-101F5;0.938771!10451-106G1;0.0409107!10450-106F9;0.588414!10604-108F1;0.698358!10605-108F2;0.853108!10606-108F3;0.921141!10603-108E9;0.885322!10497-107C2;0.85744!10448-106F7;0.928473!10643-109A4;0.852472!10426-106D3;0.870899!10431-106D8;0.447558!10197-103E8;0.960269!10443-106F2;0.166845!10815-111B5;0.641799!10816-111B6;0.920737!10817-111B7;0.751874!10015-101C6;0.964855!10410-106B5;0.0281442!10054-101G9;0.375151!10758-110E2;0.33966!10711-109H9;0.631936!10040-101F4;0.850112!10470-106I2;0.838697!10415-106C1;0.57039!10198-103E9;0.654535!10614-108G2;0.0219183!10612-108F9;0.934208!10549-107H9;0.870453!10615-108G3;0.714806!10487-107B1;0.516021!10433-106E1;0.505706!10688-109F4;0.204541!10444-106F3;0.4811!10444-106F3;0.624255!10485-107A8;0.659673!10413-106B8;0.577442!10175-103C4;0.263853!10161-103A8;0.898262!12131-128D7;0.989326!10624-108H3;0.428168!10712-109I1;0.853221!10205-103F7;0.132888!10206-103F8;0.328081!10207-103F9;0.375804!10050-101G5;0.158886!10051-101G6;0.73405!10016-101C7;0.79838!10046-101G1;0.522547!10778-110G4;0.503753!10633-108I3;0.832244!10818-111B8;0.805848!10819-111B9;0.609428!10820-111C1;0.564945!10484-107A7;0.52213!10808-111A7;0.686717!10169-103B7;0.169651!10153-102I9;0.72863!13425-144D5;0.812898!13433-144E4;0.845436!13437-144E8;0.956475!11904-125F5;0.940792!11905-125F6;0.823674!10039-101F3;0.999986!10791-110H8;0.82786!10017-101C8;0.679566!10045-101F9;0.0648715!10509-107D5;0.0175937!10839-111E2;0.631743!10692-109F8;0.959038!10079-102A7;0.972308!10078-102A6;0.47182!10721-110A1;0.759736!10569-108B2;0.491982!10570-108B3;0.868236!10571-108B4;0.307392!10647-109A8;0.784401!10752-110D5;0.452856!10782-110G8;0.197545!10726-110A6;0.291205!10018-101C9;0.897562!10086-102B5;0.175452!10182-103D2;0.897535!10165-103B3;0.764445!10499-107C4;0.974714!10408-106B3;0.955623!10019-101D1;0.60993!10068-101I5;0.000547983!10075-102A3;0.00872708!10077-102A5;0.00798149!10727-110A7;0.118757!10775-110G1;0.17105!10412-106B7;0.0921298!12231-129F8;0.13536!12232-129F9;0.0456525!12233-129G1;0.00611695!12234-129G2;0.0110629!10414-106B9;0.0396354!10170-103B8;0.421865!10183-103D3;0.890205!10150-102I6;0.835101!10174-103C3;0.810092!10155-103A2;0.527412!10038-101F2;0.654558!10838-111E1;0.550004!10759-110E3;0.717723!10514-107E1;0.9986!10465-106H6;0.714076!10691-109F7;0.517322!10843-111E6;0.652931!10844-111E7;0.280291!11747-123G1;0.636507!11748-123G2;0.756995!11749-123G3;0.828738!11750-123G4;0.693484!11751-123G5;0.99885!11840-124H4;0.887852!11752-123G6;0.741488!11753-123G7;0.626417!11754-123G8;0.948697!11755-123G9;0.978087!11756-123H1;0.784486!11833-124G6;0.385404!11760-123H5;0.719992!11836-124G9;0.456393!11758-123H3;0.399768!11835-124G8;0.712966!11762-123H7;0.69094!11838-124H2;0.583926!11757-123H2;0.441932!11759-123H4;0.659956!11761-123H6;0.509962!11842-124H6;0.688147!11837-124H1;0.659902!10568-108B1;0.308396!13230-141I8;0.365044!13231-141I9;0.464688!10696-109G3;0.466504!10493-107B7;0.271039!10494-107B8;0.555317!10850-111F4;0.940221!10851-111F5;0.993449!10852-111F6;0.450431!10853-111F7;0.25787!10854-111F8;0.977467!10855-111F9;0.418875!10856-111G1;0.596875!10847-111F1;0.796044!10846-111E9;0.859961!10848-111F2;0.557765!10845-111E8;0.47074!10857-111G2;0.621874!10858-111G3;0.586885!10156-103A3;0.284431!11901-125F2;0.876242!11902-125F3;0.686707!11903-125F4;0.383749!10689-109F5;0.728234!10648-109A9;0.329644!10784-110H1;0.924309!10744-110C6;0.807229!10772-110F7;0.0461048!10474-106I6;0.0237039!10600-108E6;0.0301505!10684-109E9;0.716957!12226-129F3;0.19344!12227-129F4;0.510684!10508-107D4;0.16632!10539-107G8;0.866355!10607-108F4;0.538259!10555-107I6;0.528819!10774-110F9;0.940496!10637-108I7;0.236167!10663-109C6;0.307835!10728-110A8;0.840594!10729-110A9;0.253987!10430-106D7;0.702642!10730-110B1;0.173352!10813-111B3;0.227579!10812-111B2;0.721346!10037-101F1;0.425781!10172-103C1;0.832404!10163-103B1;0.831741!10076-102A4;0.799125!10073-102A1;0.922812!10036-101E9;0.991458!10195-103E6;0.927865!10277-104E7;0.892506!10434-106E2;0.809162!10550-107I1;0.995194!10545-107H5;0.860022!10544-107H4;0.435034!10704-109H2;0.155456!10510-107D6;0.312819!10558-107I9;0.568021!10020-101D2;0.790156!10732-110B3;0.00066545!10049-101G4;0.228118!10698-109G5;0.876782!10437-106E5;0.311212!10417-106C3;0.673128!10035-101E8;0.485868!10171-103B9;0.904201!10157-103A4;0.992605!10034-101E7;0.812796!10072-101I9;0.917628!10199-103F1;0.901794!10200-103F2;0.196296!10697-109G4;0.144818!10723-110A3;0.41682!10179-103C8;0.557293!10160-103A7;0.35732!10180-103C9;0.332019!10162-103A9;0.693166!10021-101D3;0.335009!10840-111E3;0.000842928!10706-109H4;0.0790455!10033-101E6;0.961182!10032-101E5;0.860322!10490-107B4;0.950337!10439-106E7;0.830997!10022-101D4;0.502358!10176-103C5;0.00452111!10469-106I1;0.87737!10067-101I4;0.454127!10411-106B6;0.0212826!10471-106I3;0.244746!10030-101E3;0.0485307!10475-106I7;0.188889!10787-110H4;0.748709!10477-106I9;0.724528!10695-109G2;0.252215!11771-123I7;0.157514!11772-123I8;0.680573!11773-123I9;0.433507!10093-102C3;0.093469!10442-106F1;0.122494!10442-106F1;0.0215319!10201-103F3;0.00908906!10639-108I9;0.0429596!11843-124H7;0.374435!11841-124H5;0.705596!10693-109F9;0.204883!10436-106E4;0.6309!10483-107A6;0.425035!10282-104F3;0.738166!10023-101D5;0.689485!10066-101I3;0.685296!10065-101I2;0.280671!10800-110I8;0.0816834!10610-108F7;0.343869!10841-111E4;0.562539!10541-107H1;0.283367!10842-111E5;0.650552!10562-108A4;0.477889!10024-101D6;0.834775!10064-101I1;0.0511634!10609-108F6;0.198312!10048-101G3;0.150505!10781-110G7;0.00818339!10181-103D1;0.485741!10159-103A6;0.583561!10056-101H2;0.70508!10737-110B8;0.655757!10025-101D7;0.946299!10044-101F8;0.0514611!10424-106D1;0.059405!10463-106H4;0.149422!10616-108G4;0.738415!10486-107A9;0.769779!10062-101H8;0.958558!10202-103F4;0.0144673!10158-103A5;0.124579!10441-106E9;0.989855!10031-101E4;0.820657!10063-101H9;0.939502!10063-101H9;0.977488!11763-123H8;0.238295!11765-123I1;0.788275!11768-123I4;0.468151!10807-111A6;0.804776!10790-110H7;0.870457!10798-110I6;0.7345!10786-110H3;0.813516!10591-108D6;0.618068!10593-108D8;0.346804!10590-108D5;0.101175!10026-101D8;0.753806!10096-102C6;0.207732!10168-103B6;0.269815!10154-103A1;0.969702!10209-103G2;0.927614!10061-101H7;0.241257!10027-101D9;0.160929!10043-101F7;0.61176!10783-110G9;0.555667!10028-101E1;0.915889!10060-101H6;0.105301!10203-103F5;0.25776!10059-101H5;0.27951!10047-101G2;0.430084!10029-101E2;0.115548!10058-101H4;0.0233602!10418-106C4;0.198473!10492-107B6;0.587862!10694-109G1;0.324096!10797-110I5;0.192049!10057-101H3;0.706825!10100-102D1;0.296698!10055-101H1;0.00330833!10204-103F6;0.0345345!10191-103E2;4.64679e-05!10563-108A5;0.198103
|name=motif_GNAATC
|name=motif_GNAATC
|tomtom_result=NFKB1#MA0105.1;2;0.00687749;3.27368;1;6;GAAATC;GGGGAATCCCC;-!SPT23#MA0388.1;0;0.00766879;3.65034;1;6;GAAATC;GAAATCAA;+!Ddit3::Cebpa#MA0019.1;4;0.00767819;3.65482;1;6;GAAATC;AGATGCAATCCC;+!onecut#MA0235.1;-1;0.00849154;4.04198;1;5;GAAATC;AAATCAA;-!dl_2#MA0023.1;1;0.00866935;4.12661;1;6;GAAATC;GGAAAACCCC;-!Gfi#MA0038.1;0;0.0109415;5.20815;1;6;GAAATC;CAAATCACTG;+!CIN5#MA0284.1;4;0.011365;5.40974;1;6;GAAATC;TTACGTAATC;+!RELA#MA0107.1;1;0.0180633;8.59812;1;6;GAAATC;GGAAATTCCC;-!NF-kappaB#MA0061.1;1;0.0196133;9.33592;1;6;GAAATC;GGAAATTCCC;-!REL#MA0101.1;1;0.0196133;9.33592;1;6;GAAATC;GGAAATCCCC;-!HLF#MA0043.1;6;0.0199196;9.48175;1;6;GAAATC;GGTTACGCAATT;+!Gsc#MA0190.1;-1;0.0208428;9.92115;1;5;GAAATC;TAATCC;+
}}
}}

Latest revision as of 13:55, 7 September 2012

Full Name: motif_GNAATC

Motif matrix
POACGT
010039520
02988988988988
033952000
043952000
050003952
060395200

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFKB1#MA0105.120.006877493.2736816GAAATCGGGGAATCCCC-
SPT23#MA0388.100.007668793.6503416GAAATCGAAATCAA+
Ddit3::Cebpa#MA0019.140.007678193.6548216GAAATCAGATGCAATCCC+
onecut#MA0235.1-10.008491544.0419815GAAATCAAATCAA-
dl_2#MA0023.110.008669354.1266116GAAATCGGAAAACCCC-
Gfi#MA0038.100.01094155.2081516GAAATCCAAATCACTG+
CIN5#MA0284.140.0113655.4097416GAAATCTTACGTAATC+
RELA#MA0107.110.01806338.5981216GAAATCGGAAATTCCC-
NF-kappaB#MA0061.110.01961339.3359216GAAATCGGAAATTCCC-
REL#MA0101.110.01961339.3359216GAAATCGGAAATCCCC-
HLF#MA0043.160.01991969.4817516GAAATCGGTTACGCAATT+
Gsc#MA0190.1-10.02084289.9211515GAAATCTAATCC+
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