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MacroAPE 1083:YTGGTCCTGVT,motif924: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.168;95.256;0.168;72.408!2;0.168;44.352;0.168;123.312!3;47.544;15.12;93.576;11.76!4;0.168;20.328;142.632;4.872!5;0.168;20.328;21.336;126.16...")
 
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10827-111C8;0.0309129!10789-110H6;0.248937!10828-111C9;0.491934!10788-110H5;0.270411!10792-110H9;0.283726!10765-110E9;0.384128!10829-111D1;0.364258!10830-111D2;0.340337!10831-111D3;0.583156!10832-111D4;0.268711!10833-111D5;0.45574!10764-110E8;0.794359!10770-110F5;0.842844!10399-106A3;0.351408!10400-106A4;0.549819!10405-106A9;0.468391!10834-111D6;0.521722!10835-111D7;0.442017!10836-111D8;0.0955503!10837-111D9;0.464031!10699-109G6;0.296115!10802-111A1;0.148259!10796-110I4;0.384106!10010-101C1;0.14951!10810-111A9;0.0420278!10421-106C7;0.0759801!10708-109H6;0.471384!12235-129G3;0.411439!12236-129G4;0.532803!12237-129G5;0.317567!10167-103B5;0.214781!10151-102I7;0.552985!10428-106D5;0.298123!10795-110I3;0.245917!10805-111A4;0.32288!10052-101G7;0.0776488!10189-103D9;0.0927857!10589-108D4;0.0589351!10425-106D2;0.123192!10427-106D4;0.137089!10702-109G9;0.215985!10432-106D9;0.524855!10496-107C1;0.773014!10718-109I7;0.439445!10011-101C2;0.741051!10053-101G8;0.0876532!10686-109F2;0.393116!10084-102B3;0.512884!10012-101C3;0.471058!10085-102B4;0.375388!10482-107A5;0.897629!10419-106C5;0.394924!10080-102A8;0.0373135!10760-110E4;0.0725641!10709-109H7;0.672526!10710-109H8;0.395099!10703-109H1;0.582021!10719-109I8;0.102306!10642-109A3;0.242233!10177-103C6;0.318043!10164-103B2;0.430378!10173-103C2;0.424439!10166-103B4;0.659038!10083-102B2;0.425818!10188-103D8;0.452668!10552-107I3;0.494677!10553-107I4;0.369376!10013-101C4;0.968557!10536-107G5;0.0706075!10618-108G6;0.0178703!10423-106C9;0.412557!10785-110H2;0.352352!12238-129G6;0.266792!12239-129G7;0.946765!12240-129G8;0.780678!10416-106C2;0.925661!10801-110I9;0.0807574!10766-110F1;0.468682!10824-111C5;0.591754!10825-111C6;0.330378!10826-111C7;0.298938!10454-106G4;0.325717!10409-106B4;0.591256!10638-108I8;0.332449!10636-108I6;0.166233!10513-107D9;0.30392!10420-106C6;0.245615!10082-102B1;0.361818!10014-101C5;0.185398!10070-101I7;0.110641!10452-106G2;0.141171!10453-106G3;0.118904!10449-106F8;0.116675!10042-101F6;0.11573!10069-101I6;0.186214!10193-103E4;0.557938!10631-108I1;0.507432!10438-106E6;0.179132!10488-107B2;0.759161!10196-103E7;0.212252!10071-101I8;0.0135633!10071-101I8;0.175118!10041-101F5;0.746187!10451-106G1;0.0801161!10450-106F9;0.148768!10604-108F1;0.125989!10605-108F2;0.458928!10606-108F3;0.244317!10603-108E9;0.596226!10497-107C2;0.32141!10448-106F7;0.309262!10643-109A4;0.197502!10426-106D3;0.439165!10431-106D8;0.804759!10197-103E8;0.711803!10443-106F2;0.106758!10815-111B5;0.516107!10816-111B6;0.270503!10817-111B7;0.344507!10015-101C6;0.260408!10410-106B5;0.257857!10054-101G9;0.251898!10758-110E2;0.156097!10711-109H9;0.169637!10040-101F4;0.182538!10470-106I2;0.439436!10415-106C1;0.251767!10198-103E9;0.331431!10614-108G2;0.064007!10612-108F9;0.242174!10549-107H9;0.398268!10615-108G3;0.0556207!10487-107B1;0.0454613!10433-106E1;0.0731979!10688-109F4;0.42405!10444-106F3;0.36984!10444-106F3;0.76839!10485-107A8;0.888297!10413-106B8;0.690842!10175-103C4;0.295629!10161-103A8;0.375133!12131-128D7;0.213966!10624-108H3;0.685691!10712-109I1;0.171608!10205-103F7;0.0506304!10206-103F8;0.219951!10207-103F9;0.356021!10050-101G5;0.662441!10051-101G6;0.30321!10016-101C7;0.376913!10046-101G1;0.451817!10778-110G4;0.628182!10633-108I3;0.281997!10818-111B8;0.217711!10819-111B9;0.0953871!10820-111C1;0.105205!10484-107A7;0.117608!10808-111A7;0.254315!10169-103B7;0.187311!10153-102I9;0.524553!13425-144D5;0.260878!13433-144E4;0.355421!13437-144E8;0.476503!11904-125F5;0.29738!11905-125F6;0.578978!10039-101F3;0.645722!10791-110H8;0.413417!10017-101C8;0.555658!10045-101F9;0.0305315!10509-107D5;0.343956!10839-111E2;0.0323548!10692-109F8;0.957951!10079-102A7;0.50876!10078-102A6;0.446925!10721-110A1;0.486113!10569-108B2;0.457714!10570-108B3;0.669295!10571-108B4;0.725197!10647-109A8;0.988323!10752-110D5;0.769287!10782-110G8;0.535106!10726-110A6;0.580364!10018-101C9;0.311793!10086-102B5;0.544673!10182-103D2;0.659581!10165-103B3;0.335404!10499-107C4;0.270668!10408-106B3;0.704669!10019-101D1;0.646324!10068-101I5;0.119318!10075-102A3;0.319126!10077-102A5;0.101535!10727-110A7;0.0246672!10775-110G1;0.0712552!10412-106B7;0.251586!12231-129F8;0.854612!12232-129F9;0.41027!12233-129G1;0.285417!12234-129G2;0.328292!10414-106B9;0.377289!10170-103B8;0.774795!10183-103D3;0.62053!10150-102I6;0.44082!10174-103C3;0.313536!10155-103A2;0.206378!10038-101F2;0.20114!10838-111E1;0.166258!10759-110E3;0.709318!10514-107E1;0.178543!10465-106H6;0.492747!10691-109F7;0.425833!10843-111E6;0.959605!10844-111E7;0.217561!11747-123G1;0.194749!11748-123G2;0.787139!11749-123G3;0.130682!11750-123G4;0.228817!11751-123G5;0.51858!11840-124H4;0.409713!11752-123G6;0.26387!11753-123G7;0.495347!11754-123G8;0.356385!11755-123G9;0.710203!11756-123H1;0.0710218!11833-124G6;0.409175!11760-123H5;0.796128!11836-124G9;0.25517!11758-123H3;0.101569!11835-124G8;0.354013!11762-123H7;0.26165!11838-124H2;0.71199!11757-123H2;0.534012!11759-123H4;0.016826!11761-123H6;0.816542!11842-124H6;0.673976!11837-124H1;0.768116!10568-108B1;0.48778!13230-141I8;0.0987457!13231-141I9;0.19225!10696-109G3;0.198043!10493-107B7;0.737288!10494-107B8;0.103369!10850-111F4;0.0115623!10851-111F5;0.0542262!10852-111F6;0.684292!10853-111F7;0.832221!10854-111F8;0.0457391!10855-111F9;0.197738!10856-111G1;0.934343!10847-111F1;0.998756!10846-111E9;0.496863!10848-111F2;0.830525!10845-111E8;0.226886!10857-111G2;0.0700917!10858-111G3;0.308567!10156-103A3;0.437084!11901-125F2;0.331042!11902-125F3;0.385965!11903-125F4;0.569535!10689-109F5;0.534599!10648-109A9;0.319592!10784-110H1;0.702792!10744-110C6;0.774603!10772-110F7;0.09781!10474-106I6;0.704914!10600-108E6;0.895388!10684-109E9;0.482981!12226-129F3;0.00221834!12227-129F4;0.553008!10508-107D4;0.134731!10539-107G8;0.416962!10607-108F4;0.367785!10555-107I6;0.0868503!10774-110F9;0.310516!10637-108I7;0.283915!10663-109C6;0.116019!10728-110A8;0.0873454!10729-110A9;0.438302!10430-106D7;0.0969746!10730-110B1;0.367513!10813-111B3;0.455509!10812-111B2;0.255329!10037-101F1;0.0453312!10172-103C1;0.407829!10163-103B1;0.59472!10076-102A4;0.286485!10073-102A1;0.482675!10036-101E9;0.943896!10195-103E6;0.45129!10277-104E7;0.388182!10434-106E2;0.225692!10550-107I1;0.570304!10545-107H5;0.345093!10544-107H4;0.895117!10704-109H2;0.682667!10510-107D6;0.229727!10558-107I9;0.45549!10020-101D2;0.85415!10732-110B3;0.315239!10049-101G4;0.782178!10698-109G5;0.872057!10437-106E5;0.202297!10417-106C3;0.122674!10035-101E8;0.987977!10171-103B9;0.44992!10157-103A4;0.533568!10034-101E7;0.360753!10072-101I9;0.413822!10199-103F1;0.898784!10200-103F2;0.0393493!10697-109G4;0.148683!10723-110A3;0.549893!10179-103C8;0.879489!10160-103A7;0.651872!10180-103C9;0.543394!10162-103A9;0.522554!10021-101D3;0.56988!10840-111E3;0.164917!10706-109H4;0.129583!10033-101E6;0.606008!10032-101E5;0.328967!10490-107B4;0.461216!10439-106E7;0.23571!10022-101D4;0.402786!10176-103C5;0.144347!10469-106I1;0.536116!10067-101I4;0.232139!10411-106B6;0.549871!10471-106I3;0.023029!10030-101E3;0.476227!10475-106I7;0.149338!10787-110H4;0.239779!10477-106I9;0.105242!10695-109G2;0.288709!11771-123I7;0.406773!11772-123I8;0.75371!11773-123I9;0.916559!10093-102C3;0.433498!10442-106F1;0.135026!10442-106F1;0.192086!10201-103F3;0.299633!10639-108I9;0.0148308!11843-124H7;0.757315!11841-124H5;0.455103!10693-109F9;0.535459!10436-106E4;0.426229!10483-107A6;0.154832!10282-104F3;0.19648!10023-101D5;0.874008!10066-101I3;0.939575!10065-101I2;0.803115!10800-110I8;0.186083!10610-108F7;0.228841!10841-111E4;0.83378!10541-107H1;0.202562!10842-111E5;0.412653!10562-108A4;0.267218!10024-101D6;0.666721!10064-101I1;0.136592!10609-108F6;0.388132!10048-101G3;0.653535!10781-110G7;0.16286!10181-103D1;0.882155!10159-103A6;0.139922!10056-101H2;0.112672!10737-110B8;0.300344!10025-101D7;0.561945!10044-101F8;0.119638!10424-106D1;0.131669!10463-106H4;0.206519!10616-108G4;0.602387!10486-107A9;0.664653!10062-101H8;0.0920451!10202-103F4;0.279117!10158-103A5;0.0552092!10441-106E9;0.144976!10031-101E4;0.273101!10063-101H9;0.412564!10063-101H9;0.890464!11763-123H8;0.179566!11765-123I1;0.141095!11768-123I4;0.0839838!10807-111A6;0.0786669!10790-110H7;0.459373!10798-110I6;0.331237!10786-110H3;0.0236601!10591-108D6;0.670719!10593-108D8;0.256318!10590-108D5;0.212014!10026-101D8;0.132718!10096-102C6;0.703836!10168-103B6;0.198823!10154-103A1;0.222785!10209-103G2;0.197237!10061-101H7;0.145179!10027-101D9;0.423406!10043-101F7;0.257925!10783-110G9;0.747382!10028-101E1;0.0795913!10060-101H6;0.468919!10203-103F5;0.267244!10059-101H5;0.341974!10047-101G2;0.562494!10029-101E2;0.143434!10058-101H4;0.0788701!10418-106C4;0.146173!10492-107B6;0.623627!10694-109G1;0.184652!10797-110I5;0.465206!10057-101H3;0.217887!10100-102D1;0.327338!10055-101H1;0.180033!10204-103F6;0.343541!10191-103E2;0.0820819!10563-108A5;0.0561492
|name=YTGGTCCTGVT,motif924,CNhs11995,T:168.0(6.68%),B:1759.9(2.56%),P:1e-27
|name=YTGGTCCTGVT,motif924,CNhs11995,T:168.0(6.68%),B:1759.9(2.56%),P:1e-27
|tomtom_result=Zfx#MA0146.1;5;0.00348521;1.65896;1;9;CTGGTCCTGGT;GGGGCCGAGGCCTG;+!REST#MA0138.2;9;0.0112304;5.34567;1;10;CTGGTCCTGGT;GCGCTGTCCATGGTGCTGA;+!REST#MA0138.2;10;0.0112546;5.35718;1;11;CTGGTCCTGGT;GGCGCTGTCCATGGTGCTGAA;-!NFE2L1::MafG#MA0089.1;-3;0.0163596;7.78716;1;6;CTGGTCCTGGT;GTCATG;-!HAP4#MA0315.1;0;0.0166499;7.92535;1;11;CTGGTCCTGGT;TCGCCTCTGATTGGT;-
}}
}}

Latest revision as of 14:08, 7 September 2012

Full Name: YTGGTCCTGVT,motif924,CNhs11995,T:168.0(6.68%),B:1759.9(2.56%),P:1e-27

Motif matrix
POACGT
10.16895.2560.16872.408
20.16844.3520.168123.312
347.54415.1293.57611.76
40.16820.328142.6324.872
50.16820.32821.336126.168
60.168150.02417.640.168
70.168167.4960.1680.168
80.1680.1680.168167.496
931.41652.75283.6640.168
1048.7256.95262.160.168
1117.30448.720.168101.808

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Zfx#MA0146.150.003485211.6589619CTGGTCCTGGTGGGGCCGAGGCCTG+
REST#MA0138.290.01123045.34567110CTGGTCCTGGTGCGCTGTCCATGGTGCTGA+
REST#MA0138.2100.01125465.35718111CTGGTCCTGGTGGCGCTGTCCATGGTGCTGAA-
NFE2L1::MafG#MA0089.1-30.01635967.7871616CTGGTCCTGGTGTCATG-
HAP4#MA0315.100.01664997.92535111CTGGTCCTGGTTCGCCTCTGATTGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:YTGGTCCTGVT,motif924&oldid=2134252"