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MacroAPE 1083:CNhs12727 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;235.485813790216;256.59703273021194;35.56373960227722;503.7560426691825!2;95.51065105773017;145.58472849235218;160.9629580511931;629.3442911...")
 
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6;0.059769!10809-111A8;0.135238!10597-108E3;0.302558!10717-109I6;0.0687577!10455-106G5;0.563274!10534-107G3;0.581637!10429-106D6;0.120094!10464-106H5;0.401216!10827-111C8;0.323772!10789-110H6;0.984239!10828-111C9;0.276738!10788-110H5;0.191942!10792-110H9;0.321005!10765-110E9;0.0852002!10829-111D1;0.314891!10830-111D2;0.800993!10831-111D3;0.110503!10832-111D4;0.523999!10833-111D5;0.586765!10764-110E8;0.23412!10770-110F5;0.204321!10399-106A3;0.103149!10400-106A4;0.672925!10405-106A9;0.66001!10834-111D6;0.748613!10835-111D7;0.990978!10836-111D8;0.88746!10837-111D9;0.409633!10699-109G6;0.784089!10802-111A1;0.659244!10796-110I4;0.649991!10010-101C1;0.327913!10810-111A9;0.284597!10421-106C7;0.243688!10708-109H6;0.414446!12235-129G3;0.18562!12236-129G4;0.0123759!12237-129G5;0.709965!10167-103B5;0.00509423!10151-102I7;0.00986024!10428-106D5;0.0585732!10795-110I3;0.785!10805-111A4;0.165137!10052-101G7;0.286401!10189-103D9;0.0524507!10589-108D4;0.0442317!10425-106D2;0.169044!10427-106D4;0.793246!10702-109G9;0.154256!10432-106D9;0.123657!10496-107C1;0.55693!10718-109I7;0.321127!10011-101C2;0.239703!10053-101G8;0.05484!10686-109F2;0.0125027!10084-102B3;0.0272198!10012-101C3;0.0942695!10085-102B4;0.0184583!10482-107A5;0.0566354!10419-106C5;0.167659!10080-102A8;0.0574097!10760-110E4;0.487427!10709-109H7;0.229759!10710-109H8;0.000673419!10703-109H1;0.410364!10719-109I8;0.728346!10642-109A3;0.245846!10177-103C6;0.818173!10164-103B2;0.0164149!10173-103C2;0.0208002!10166-103B4;0.284837!10083-102B2;0.210598!10188-103D8;0.363071!10552-107I3;0.0139305!10553-107I4;0.259574!10013-101C4;0.14076!10536-107G5;0.01894!10618-108G6;0.807948!10423-106C9;0.102418!10785-110H2;0.279042!12238-129G6;0.117252!12239-129G7;0.175801!12240-129G8;0.16991!10416-106C2;0.401164!10801-110I9;0.940453!10766-110F1;0.500442!10824-111C5;0.663075!10825-111C6;0.415266!10826-111C7;0.404127!10454-106G4;0.501878!10409-106B4;0.608497!10638-108I8;0.77537!10636-108I6;0.0847577!10513-107D9;0.229778!10420-106C6;0.755751!10082-102B1;0.342361!10014-101C5;0.228876!10070-101I7;0.0874086!10452-106G2;0.00160808!10453-106G3;0.59242!10449-106F8;0.98377!10042-101F6;0.899941!10069-101I6;0.220552!10193-103E4;0.218244!10631-108I1;0.0205067!10438-106E6;0.606268!10488-107B2;0.123729!10196-103E7;0.0691024!10071-101I8;0.338247!10071-101I8;0.00211759!10041-101F5;0.00294688!10451-106G1;0.0240534!10450-106F9;0.0255738!10604-108F1;0.603338!10605-108F2;0.494857!10606-108F3;0.267617!10603-108E9;0.229979!10497-107C2;0.108988!10448-106F7;0.0185992!10643-109A4;0.375896!10426-106D3;0.00981215!10431-106D8;0.110364!10197-103E8;0.223296!10443-106F2;0.0634191!10815-111B5;0.119234!10816-111B6;0.444059!10817-111B7;0.209789!10015-101C6;0.342408!10410-106B5;0.0340327!10054-101G9;0.0167224!10758-110E2;0.0093275!10711-109H9;0.246491!10040-101F4;0.848898!10470-106I2;0.0320454!10415-106C1;0.780065!10198-103E9;0.121863!10614-108G2;0.0172722!10612-108F9;0.717916!10549-107H9;0.207878!10615-108G3;0.346711!10487-107B1;0.0575212!10433-106E1;0.0968963!10688-109F4;0.149471!10444-106F3;0.148872!10444-106F3;0.523288!10485-107A8;0.59121!10413-106B8;0.120836!10175-103C4;0.396156!10161-103A8;0.117322!12131-128D7;0.145071!10624-108H3;0.0188781!10712-109I1;0.0151314!10205-103F7;0.609157!10206-103F8;0.177019!10207-103F9;0.111453!10050-101G5;0.49346!10051-101G6;0.338948!10016-101C7;0.310173!10046-101G1;0.394413!10778-110G4;0.146157!10633-108I3;0.186704!10818-111B8;0.108353!10819-111B9;0.545566!10820-111C1;0.507582!10484-107A7;0.582402!10808-111A7;0.299206!10169-103B7;0.702615!10153-102I9;0.0608984!13425-144D5;0.0540071!13433-144E4;0.338482!13437-144E8;0.134189!11904-125F5;0.247616!11905-125F6;0.00693449!10039-101F3;0.00123498!10791-110H8;0.0372784!10017-101C8;0.0892765!10045-101F9;0.62638!10509-107D5;0.239692!10839-111E2;0.0293011!10692-109F8;0.0706629!10079-102A7;0.0933067!10078-102A6;0.0798527!10721-110A1;0.186926!10569-108B2;0.20133!10570-108B3;0.120306!10571-108B4;0.357505!10647-109A8;0.0223152!10752-110D5;0.736146!10782-110G8;0.404415!10726-110A6;0.0145761!10018-101C9;0.829929!10086-102B5;0.697372!10182-103D2;0.759183!10165-103B3;0.0301233!10499-107C4;0.0493568!10408-106B3;0.0842681!10019-101D1;0.362473!10068-101I5;0.323735!10075-102A3;0.148995!10077-102A5;0.190502!10727-110A7;0.337561!10775-110G1;0.00380423!10412-106B7;0.203321!12231-129F8;0.520315!12232-129F9;0.555509!12233-129G1;0.533949!12234-129G2;0.437921!10414-106B9;0.156964!10170-103B8;0.0554198!10183-103D3;0.0295238!10150-102I6;0.0212898!10174-103C3;0.0256031!10155-103A2;0.071343!10038-101F2;0.0319155!10838-111E1;0.0298945!10759-110E3;0.464246!10514-107E1;0.867422!10465-106H6;0.417904!10691-109F7;0.267691!10843-111E6;0.960875!10844-111E7;0.373901!11747-123G1;0.835965!11748-123G2;0.0158424!11749-123G3;0.0436193!11750-123G4;0.0477034!11751-123G5;0.0961405!11840-124H4;0.13643!11752-123G6;0.540801!11753-123G7;0.826212!11754-123G8;0.268619!11755-123G9;0.157598!11756-123H1;0.40763!11833-124G6;0.257295!11760-123H5;0.877653!11836-124G9;0.325664!11758-123H3;0.034463!11835-124G8;0.0843393!11762-123H7;0.0600923!11838-124H2;0.131807!11757-123H2;0.278305!11759-123H4;0.141182!11761-123H6;0.188558!11842-124H6;0.658058!11837-124H1;0.453339!10568-108B1;0.0583036!13230-141I8;0.0603437!13231-141I9;0.000972554!10696-109G3;0.00416877!10493-107B7;0.146601!10494-107B8;0.0515386!10850-111F4;0.855532!10851-111F5;0.667509!10852-111F6;0.175629!10853-111F7;0.178008!10854-111F8;0.646667!10855-111F9;0.973061!10856-111G1;0.0238955!10847-111F1;0.61121!10846-111E9;0.135696!10848-111F2;0.835433!10845-111E8;0.640182!10857-111G2;0.369073!10858-111G3;0.719537!10156-103A3;0.987294!11901-125F2;0.0389912!11902-125F3;0.0549482!11903-125F4;0.00454976!10689-109F5;0.00155677!10648-109A9;0.886673!10784-110H1;0.507547!10744-110C6;0.149376!10772-110F7;0.831221!10474-106I6;0.475412!10600-108E6;0.114997!10684-109E9;0.558268!12226-129F3;0.105894!12227-129F4;0.000119833!10508-107D4;0.994883!10539-107G8;0.781759!10607-108F4;0.804138!10555-107I6;0.924858!10774-110F9;0.515865!10637-108I7;0.694852!10663-109C6;0.472717!10728-110A8;0.598668!10729-110A9;0.605412!10430-106D7;0.0639044!10730-110B1;0.125333!10813-111B3;0.336485!10812-111B2;0.0540818!10037-101F1;0.0636401!10172-103C1;0.0201332!10163-103B1;0.0378564!10076-102A4;0.0821199!10073-102A1;0.0601856!10036-101E9;0.034018!10195-103E6;0.043174!10277-104E7;0.0252161!10434-106E2;0.781894!10550-107I1;0.0399014!10545-107H5;0.235572!10544-107H4;0.546203!10704-109H2;0.1909!10510-107D6;0.0798408!10558-107I9;0.185211!10020-101D2;0.0326648!10732-110B3;0.0654292!10049-101G4;0.179037!10698-109G5;0.413622!10437-106E5;0.179544!10417-106C3;0.511624!10035-101E8;0.118768!10171-103B9;0.029733!10157-103A4;0.0300898!10034-101E7;0.0263337!10072-101I9;0.0289039!10199-103F1;0.00711242!10200-103F2;0.887491!10697-109G4;0.0639841!10723-110A3;0.718315!10179-103C8;0.892579!10160-103A7;0.626273!10180-103C9;0.506448!10162-103A9;0.728662!10021-101D3;0.72823!10840-111E3;0.716105!10706-109H4;0.159645!10033-101E6;0.614692!10032-101E5;0.0327699!10490-107B4;0.0417267!10439-106E7;0.116776!10022-101D4;0.0906089!10176-103C5;0.0269798!10469-106I1;0.0283023!10067-101I4;0.151671!10411-106B6;0.000244214!10471-106I3;0.881544!10030-101E3;0.0626495!10475-106I7;0.0475395!10787-110H4;0.376932!10477-106I9;0.923523!10695-109G2;0.980995!11771-123I7;0.558953!11772-123I8;0.0235989!11773-123I9;0.222196!10093-102C3;0.00659024!10442-106F1;0.518714!10442-106F1;0.985783!10201-103F3;0.953985!10639-108I9;0.170304!11843-124H7;0.160887!11841-124H5;0.00629177!10693-109F9;0.186631!10436-106E4;0.0117511!10483-107A6;0.323724!10282-104F3;0.119029!10023-101D5;0.787851!10066-101I3;0.870175!10065-101I2;0.196909!10800-110I8;0.0715849!10610-108F7;0.107342!10841-111E4;0.661446!10541-107H1;0.38896!10842-111E5;0.366696!10562-108A4;0.369793!10024-101D6;0.261914!10064-101I1;0.136097!10609-108F6;0.000655125!10048-101G3;0.179209!10781-110G7;0.091689!10181-103D1;0.0802035!10159-103A6;0.0430242!10056-101H2;0.125461!10737-110B8;0.00174163!10025-101D7;0.037593!10044-101F8;0.222788!10424-106D1;0.244974!10463-106H4;0.106211!10616-108G4;0.0126075!10486-107A9;0.00162838!10062-101H8;0.0117266!10202-103F4;0.192927!10158-103A5;0.748599!10441-106E9;0.309447!10031-101E4;0.848838!10063-101H9;0.0437903!10063-101H9;0.0187894!11763-123H8;0.000377651!11765-123I1;0.00290252!11768-123I4;0.0511488!10807-111A6;0.00749862!10790-110H7;0.852581!10798-110I6;0.499851!10786-110H3;0.64739!10591-108D6;0.431786!10593-108D8;0.61441!10590-108D5;0.588063!10026-101D8;0.272771!10096-102C6;0.126786!10168-103B6;0.801984!10154-103A1;0.0981715!10209-103G2;0.0670341!10061-101H7;0.103645!10027-101D9;0.0106352!10043-101F7;0.880027!10783-110G9;0.638842!10028-101E1;0.429228!10060-101H6;0.677665!10203-103F5;0.21184!10059-101H5;0.182236!10047-101G2;0.124099!10029-101E2;0.188814!10058-101H4;0.0443271!10418-106C4;0.023254!10492-107B6;0.886334!10694-109G1;0.43779!10797-110I5;0.180866!10057-101H3;0.208834!10100-102D1;0.0159837!10055-101H1;0.137585!10204-103F6;0.00292577!10191-103E2;0.737281!10563-108A5;0.0510215
|name=CNhs12727_bl_f1
|name=CNhs12727_bl_f1
|tomtom_result=pan#MA0237.1;0;0.00126655;0.602878;1;8;TTTCAAAGT;GATCAAAG;-!exd#MA0222.1;0;0.00409075;1.9472;1;8;TTTCAAAGT;TGTCAAAA;-!RME1#MA0370.1;-1;0.00412622;1.96408;1;8;TTTCAAAGT;TCCAAAGGAA;+!NR2F1#MA0017.1;2;0.00640208;3.04739;1;9;TTTCAAAGT;AGGTTCAAAGGTCA;-!slbo#MA0244.1;1;0.00693148;3.29938;1;7;TTTCAAAGT;ATTGCAAA;+!HNF4A#MA0114.1;1;0.0113938;5.42346;1;9;TTTCAAAGT;AGGCCAAAGGTCA;+!Sox2#MA0143.1;8;0.0197066;9.38035;1;7;TTTCAAAGT;CCTTTGTTATGCAAA;+!CEP3#MA0282.1;0;0.0203973;9.70912;1;8;TTTCAAAGT;TTTCCGAG;-
}}
}}

Latest revision as of 14:08, 7 September 2012

Full Name: CNhs12727_bl_f1

Motif matrix
POACGT
1235.485813790216256.5970327302119435.56373960227722503.7560426691825
295.51065105773017145.58472849235218160.9629580511931629.3442911906117
3153.94416518830155250.61543344359936204.41960755940195422.423422600585
41.10609539257997261023.5578828913180.337748420143770666.400902087845268
51028.24166246843450.00.03.160966323452874
6612.03844222039613.8651973188658606414.696057360104130.8029318925216179
71029.44885392711010.6512582882591080.6512582882591080.651258288259108
8336.72011676390304152.56526291602705526.459365886634715.657883225322662
9296.40670773301287154.7751774137551204.1646688849664376.0560747601533

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
pan#MA0237.100.001266550.60287818TTTCAAAGTGATCAAAG-
exd#MA0222.100.004090751.947218TTTCAAAGTTGTCAAAA-
RME1#MA0370.1-10.004126221.9640818TTTCAAAGTTCCAAAGGAA+
NR2F1#MA0017.120.006402083.0473919TTTCAAAGTAGGTTCAAAGGTCA-
slbo#MA0244.110.006931483.2993817TTTCAAAGTATTGCAAA+
HNF4A#MA0114.110.01139385.4234619TTTCAAAGTAGGCCAAAGGTCA+
Sox2#MA0143.180.01970669.3803517TTTCAAAGTCCTTTGTTATGCAAA+
CEP3#MA0282.100.02039739.7091218TTTCAAAGTTTTCCGAG-
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