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MacroAPE 1083:CNhs11380 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;11.545799548641577;11.949694657590408;17.44408879862153;6.060416995146483!2;0.38281198801453564;2.619104177310227;0.46182688290573914;43.536...")
 
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I6;0.341834!10455-106G5;0.765856!10534-107G3;0.111092!10429-106D6;0.137969!10464-106H5;0.0537071!10827-111C8;0.00688232!10789-110H6;0.125315!10828-111C9;0.095995!10788-110H5;0.0522407!10792-110H9;0.201418!10765-110E9;0.0368833!10829-111D1;0.284782!10830-111D2;0.170072!10831-111D3;0.0303375!10832-111D4;0.0472867!10833-111D5;0.468997!10764-110E8;0.181693!10770-110F5;0.070332!10399-106A3;0.0365876!10400-106A4;0.0629954!10405-106A9;0.05431!10834-111D6;0.15804!10835-111D7;0.0962934!10836-111D8;0.205217!10837-111D9;0.00791354!10699-109G6;0.0814728!10802-111A1;0.0927119!10796-110I4;0.00706898!10010-101C1;0.157337!10810-111A9;0.669407!10421-106C7;0.133818!10708-109H6;0.116193!12235-129G3;0.590163!12236-129G4;0.774851!12237-129G5;0.475963!10167-103B5;0.732619!10151-102I7;0.600936!10428-106D5;0.478372!10795-110I3;0.159344!10805-111A4;0.0824861!10052-101G7;0.272915!10189-103D9;0.0339022!10589-108D4;0.781342!10425-106D2;0.790949!10427-106D4;0.15751!10702-109G9;0.317112!10432-106D9;0.200299!10496-107C1;0.180859!10718-109I7;0.223844!10011-101C2;0.0949294!10053-101G8;0.107862!10686-109F2;0.0124096!10084-102B3;0.0510954!10012-101C3;0.924639!10085-102B4;0.563214!10482-107A5;0.983652!10419-106C5;0.0924288!10080-102A8;0.0217884!10760-110E4;0.121149!10709-109H7;0.547491!10710-109H8;0.0484393!10703-109H1;0.0506504!10719-109I8;0.242915!10642-109A3;0.841937!10177-103C6;0.68662!10164-103B2;0.142064!10173-103C2;0.328117!10166-103B4;0.992066!10083-102B2;0.772892!10188-103D8;0.908049!10552-107I3;0.169361!10553-107I4;0.570349!10013-101C4;0.654809!10536-107G5;0.029088!10618-108G6;0.140137!10423-106C9;0.0299293!10785-110H2;0.385604!12238-129G6;0.0674628!12239-129G7;0.555261!12240-129G8;0.123899!10416-106C2;0.106264!10801-110I9;0.0916923!10766-110F1;0.18691!10824-111C5;0.0172804!10825-111C6;0.118982!10826-111C7;0.0796641!10454-106G4;0.144539!10409-106B4;0.0994742!10638-108I8;0.0184392!10636-108I6;0.706149!10513-107D9;0.795419!10420-106C6;0.201297!10082-102B1;0.386777!10014-101C5;0.916762!10070-101I7;0.782544!10452-106G2;0.40718!10453-106G3;0.75951!10449-106F8;0.306239!10042-101F6;0.274435!10069-101I6;0.684068!10193-103E4;0.136134!10631-108I1;0.433505!10438-106E6;0.168684!10488-107B2;0.116572!10196-103E7;0.209282!10071-101I8;0.121862!10071-101I8;0.29241!10041-101F5;0.484169!10451-106G1;0.23855!10450-106F9;0.89105!10604-108F1;0.475235!10605-108F2;0.0772643!10606-108F3;0.102503!10603-108E9;0.0401841!10497-107C2;0.0274947!10448-106F7;0.721736!10643-109A4;0.543551!10426-106D3;0.397608!10431-106D8;0.162582!10197-103E8;0.629369!10443-106F2;0.0219456!10815-111B5;0.288437!10816-111B6;0.111966!10817-111B7;0.0879885!10015-101C6;0.082016!10410-106B5;0.48732!10054-101G9;0.115426!10758-110E2;0.0582801!10711-109H9;0.686784!10040-101F4;0.319213!10470-106I2;0.570786!10415-106C1;0.512921!10198-103E9;0.0195175!10614-108G2;0.302259!10612-108F9;0.901094!10549-107H9;0.442121!10615-108G3;0.138451!10487-107B1;0.662404!10433-106E1;0.160451!10688-109F4;0.083034!10444-106F3;0.374986!10444-106F3;0.838864!10485-107A8;0.978696!10413-106B8;0.352459!10175-103C4;0.512804!10161-103A8;0.626724!12131-128D7;0.959964!10624-108H3;0.333538!10712-109I1;0.432091!10205-103F7;0.249197!10206-103F8;0.157728!10207-103F9;0.218464!10050-101G5;0.0536229!10051-101G6;0.853604!10016-101C7;0.660537!10046-101G1;0.872628!10778-110G4;0.201123!10633-108I3;0.351169!10818-111B8;0.677852!10819-111B9;0.407121!10820-111C1;0.46755!10484-107A7;0.497267!10808-111A7;0.584554!10169-103B7;0.21162!10153-102I9;0.344848!13425-144D5;0.371547!13433-144E4;0.472644!13437-144E8;0.705318!11904-125F5;0.939197!11905-125F6;0.97803!10039-101F3;0.471377!10791-110H8;0.581829!10017-101C8;0.463309!10045-101F9;0.589399!10509-107D5;0.204938!10839-111E2;0.189792!10692-109F8;0.900808!10079-102A7;0.82811!10078-102A6;0.369229!10721-110A1;0.849379!10569-108B2;0.303557!10570-108B3;0.0285379!10571-108B4;0.177732!10647-109A8;0.0197221!10752-110D5;0.511894!10782-110G8;0.0389721!10726-110A6;0.135588!10018-101C9;0.487271!10086-102B5;0.0130633!10182-103D2;0.162378!10165-103B3;0.609321!10499-107C4;0.713852!10408-106B3;0.335532!10019-101D1;0.0936061!10068-101I5;0.211363!10075-102A3;0.0542277!10077-102A5;0.913316!10727-110A7;0.201469!10775-110G1;0.0961717!10412-106B7;0.19804!12231-129F8;0.802142!12232-129F9;0.639438!12233-129G1;0.895813!12234-129G2;0.907521!10414-106B9;0.989381!10170-103B8;0.13871!10183-103D3;0.412258!10150-102I6;0.345441!10174-103C3;0.521139!10155-103A2;0.17678!10038-101F2;0.295559!10838-111E1;0.507057!10759-110E3;0.805643!10514-107E1;0.795962!10465-106H6;0.914373!10691-109F7;0.647597!10843-111E6;0.577919!10844-111E7;0.710597!11747-123G1;0.957235!11748-123G2;0.0212248!11749-123G3;0.0121523!11750-123G4;0.00925447!11751-123G5;0.00615919!11840-124H4;0.0193807!11752-123G6;0.0503688!11753-123G7;0.0236804!11754-123G8;0.0451503!11755-123G9;0.0140719!11756-123H1;0.0130833!11833-124G6;0.0287122!11760-123H5;0.0187696!11836-124G9;0.0102598!11758-123H3;0.023449!11835-124G8;0.0804437!11762-123H7;0.0217156!11838-124H2;0.00614561!11757-123H2;0.160248!11759-123H4;0.0203699!11761-123H6;0.00680771!11842-124H6;0.00450964!11837-124H1;0.074863!10568-108B1;0.0344972!13230-141I8;0.334207!13231-141I9;0.0505316!10696-109G3;0.105186!10493-107B7;0.427912!10494-107B8;0.000286698!10850-111F4;0.131418!10851-111F5;0.951439!10852-111F6;0.103694!10853-111F7;0.104722!10854-111F8;0.749951!10855-111F9;0.459354!10856-111G1;0.768419!10847-111F1;0.958645!10846-111E9;0.428824!10848-111F2;0.460804!10845-111E8;0.880681!10857-111G2;0.67031!10858-111G3;0.623586!10156-103A3;0.922235!11901-125F2;0.545992!11902-125F3;0.546161!11903-125F4;0.3005!10689-109F5;0.462264!10648-109A9;0.670008!10784-110H1;0.340216!10744-110C6;0.0438632!10772-110F7;0.0631573!10474-106I6;0.338797!10600-108E6;0.0717232!10684-109E9;0.104287!12226-129F3;0.626053!12227-129F4;0.164957!10508-107D4;0.845856!10539-107G8;0.461964!10607-108F4;0.932313!10555-107I6;0.651275!10774-110F9;0.883239!10637-108I7;0.743425!10663-109C6;0.453527!10728-110A8;0.713619!10729-110A9;0.815292!10430-106D7;0.163972!10730-110B1;0.268939!10813-111B3;0.192337!10812-111B2;0.0140097!10037-101F1;0.509627!10172-103C1;0.432399!10163-103B1;0.423368!10076-102A4;0.740559!10073-102A1;0.841145!10036-101E9;0.755181!10195-103E6;0.91393!10277-104E7;0.440912!10434-106E2;0.617089!10550-107I1;0.154517!10545-107H5;0.387863!10544-107H4;0.757051!10704-109H2;0.684406!10510-107D6;0.0423267!10558-107I9;0.872677!10020-101D2;0.13886!10732-110B3;0.0523664!10049-101G4;0.0908167!10698-109G5;0.932999!10437-106E5;0.0160933!10417-106C3;0.744428!10035-101E8;0.579192!10171-103B9;0.757236!10157-103A4;0.48181!10034-101E7;0.415703!10072-101I9;0.739731!10199-103F1;0.420782!10200-103F2;0.407114!10697-109G4;0.150458!10723-110A3;0.358229!10179-103C8;0.961092!10160-103A7;0.939839!10180-103C9;0.906398!10162-103A9;0.841147!10021-101D3;0.717658!10840-111E3;0.600556!10706-109H4;0.154639!10033-101E6;0.64653!10032-101E5;0.926335!10490-107B4;0.79472!10439-106E7;0.0933519!10022-101D4;0.104138!10176-103C5;0.137975!10469-106I1;0.359372!10067-101I4;0.558838!10411-106B6;0.209073!10471-106I3;0.562502!10030-101E3;0.547431!10475-106I7;0.0683715!10787-110H4;0.709338!10477-106I9;0.935082!10695-109G2;0.951984!11771-123I7;0.0576472!11772-123I8;0.390808!11773-123I9;0.101537!10093-102C3;0.683772!10442-106F1;0.233581!10442-106F1;0.296207!10201-103F3;0.243517!10639-108I9;0.142593!11843-124H7;0.197295!11841-124H5;0.798828!10693-109F9;0.478875!10436-106E4;0.277083!10483-107A6;0.273784!10282-104F3;0.086465!10023-101D5;0.565801!10066-101I3;0.491466!10065-101I2;0.288308!10800-110I8;0.0272686!10610-108F7;0.141269!10841-111E4;0.389259!10541-107H1;0.839864!10842-111E5;0.456266!10562-108A4;0.534588!10024-101D6;0.00788879!10064-101I1;0.304028!10609-108F6;0.413657!10048-101G3;0.295201!10781-110G7;0.156303!10181-103D1;0.135334!10159-103A6;0.480758!10056-101H2;0.698107!10737-110B8;0.235188!10025-101D7;0.0558296!10044-101F8;0.0941624!10424-106D1;0.356159!10463-106H4;0.165909!10616-108G4;0.756648!10486-107A9;0.501163!10062-101H8;0.830156!10202-103F4;0.932723!10158-103A5;0.29878!10441-106E9;0.982441!10031-101E4;0.982646!10063-101H9;0.643376!10063-101H9;0.655029!11763-123H8;0.0518461!11765-123I1;0.0175612!11768-123I4;0.0167974!10807-111A6;0.0324175!10790-110H7;0.22087!10798-110I6;0.684275!10786-110H3;0.347975!10591-108D6;0.343682!10593-108D8;0.844629!10590-108D5;0.817952!10026-101D8;0.877125!10096-102C6;0.0606878!10168-103B6;0.445828!10154-103A1;0.717926!10209-103G2;0.579289!10061-101H7;0.18292!10027-101D9;0.00729408!10043-101F7;0.16612!10783-110G9;0.697991!10028-101E1;0.415485!10060-101H6;0.864248!10203-103F5;0.13289!10059-101H5;0.15802!10047-101G2;0.0634497!10029-101E2;0.463179!10058-101H4;0.0232268!10418-106C4;0.00811215!10492-107B6;0.381643!10694-109G1;0.204621!10797-110I5;0.11979!10057-101H3;0.110025!10100-102D1;0.0474852!10055-101H1;0.0456476!10204-103F6;0.00463281!10191-103E2;0.194144!10563-108A5;0.888677
|name=CNhs11380_bu_f0
|name=CNhs11380_bu_f0
|tomtom_result=NFATC2#MA0152.1;0;0.000738256;0.35141;0.70282;7;GTTTCCAAGTC;TTTTCCA;+!CEP3#MA0282.1;-1;0.00465071;2.21374;1;8;GTTTCCAAGTC;TTTCCGAG;-!ELK1#MA0028.1;-1;0.00747986;3.56041;1;10;GTTTCCAAGTC;CTTCCGGCTC;-!NFIC#MA0161.1;-2;0.011212;5.33693;1;6;GTTTCCAAGTC;TGCCAA;-!FKH1#MA0296.1;8;0.0127928;6.08936;1;11;GTTTCCAAGTC;TCCTCTTTGTTTACAATTCA;-!RELA#MA0107.1;4;0.0146261;6.96202;1;6;GTTTCCAAGTC;GGGAATTTCC;+!GCR1#MA0304.1;1;0.0147041;6.99916;1;7;GTTTCCAAGTC;GGCTTCCA;-!REL#MA0101.1;4;0.0153185;7.29162;1;6;GTTTCCAAGTC;GGGGATTTCC;+!HSF1#MA0319.1;0;0.0169104;8.04937;1;8;GTTTCCAAGTC;TGTTCCAT;-!ETS1#MA0098.1;-1;0.0174476;8.30506;1;6;GTTTCCAAGTC;CTTCCG;+!GCR2#MA0305.1;0;0.018437;8.776;1;7;GTTTCCAAGTC;GCTTCCT;+!FOXO3#MA0157.1;1;0.0194128;9.24051;1;7;GTTTCCAAGTC;TGTTTACA;-!YRM1#MA0438.1;0;0.0203169;9.67086;1;8;GTTTCCAAGTC;ATTTCCGT;-
}}
}}

Latest revision as of 14:08, 7 September 2012

Full Name: CNhs11380_bu_f0

Motif matrix
POACGT
111.54579954864157711.94969465759040817.444088798621536.060416995146483
20.382811988014535642.6191041773102270.4618268829057391443.536256951769495
30.65416219912023249.3340633205088411.679262264509875435.33251221586105
40.00.86155755845505940.99780389217543845.140638549369505
50.4297432487680540.9435125144714865.6267442367604760.0
60.047.000000000000010.00.0
743.806099631982642.79964437558394460.00.3942559924334241
827.5771994015698851.0209129289976368.3207293419345110.081158327497969
95.50927830119808915.63454025782951422.5232332682467453.33294817272565
102.940348585405700513.71515255170732514.9921847238617615.352314139025214
119.98148201323424916.1047517211997714.8780130055583286.035753260007655

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFATC2#MA0152.100.0007382560.351410.702827GTTTCCAAGTCTTTTCCA+
CEP3#MA0282.1-10.004650712.2137418GTTTCCAAGTCTTTCCGAG-
ELK1#MA0028.1-10.007479863.56041110GTTTCCAAGTCCTTCCGGCTC-
NFIC#MA0161.1-20.0112125.3369316GTTTCCAAGTCTGCCAA-
FKH1#MA0296.180.01279286.08936111GTTTCCAAGTCTCCTCTTTGTTTACAATTCA-
RELA#MA0107.140.01462616.9620216GTTTCCAAGTCGGGAATTTCC+
GCR1#MA0304.110.01470416.9991617GTTTCCAAGTCGGCTTCCA-
REL#MA0101.140.01531857.2916216GTTTCCAAGTCGGGGATTTCC+
HSF1#MA0319.100.01691048.0493718GTTTCCAAGTCTGTTCCAT-
ETS1#MA0098.1-10.01744768.3050616GTTTCCAAGTCCTTCCG+
GCR2#MA0305.100.0184378.77617GTTTCCAAGTCGCTTCCT+
FOXO3#MA0157.110.01941289.2405117GTTTCCAAGTCTGTTTACA-
YRM1#MA0438.100.02031699.6708618GTTTCCAAGTCATTTCCGT-
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