MacroAPE 1083:Motif359: Difference between revisions
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06D6;0.0523242!10464-106H5;0.0525876!10827-111C8;0.0714653!10789-110H6;0.0505459!10828-111C9;0.05954!10788-110H5;0.0329111!10792-110H9;0.0360273!10765-110E9;0.0577901!10829-111D1;0.0326171!10830-111D2;0.0374685!10831-111D3;0.0349178!10832-111D4;0.0426201!10833-111D5;0.0421352!10764-110E8;0.0272985!10770-110F5;0.0853688!10399-106A3;0.0314075!10400-106A4;0.0225684!10405-106A9;0.0245462!10834-111D6;0.0219316!10835-111D7;0.0436587!10836-111D8;0.0945165!10837-111D9;0.0289797!10699-109G6;0.0714113!10802-111A1;0.0371832!10796-110I4;0.0616013!10010-101C1;0.180189!10810-111A9;0.147168!10421-106C7;0.173248!10708-109H6;0.115405!12235-129G3;0.941496!12236-129G4;0.0445304!12237-129G5;0.0893954!10167-103B5;0.0365726!10151-102I7;0.463696!10428-106D5;0.911832!10795-110I3;0.55231!10805-111A4;0.0337404!10052-101G7;0.143886!10189-103D9;0.0580779!10589-108D4;0.0563639!10425-106D2;0.53489!10427-106D4;0.130051!10702-109G9;0.0610324!10432-106D9;0.0862062!10496-107C1;0.00577638!10718-109I7;0.386603!10011-101C2;0.028907!10053-101G8;0.0535927!10686-109F2;0.709573!10084-102B3;0.813771!10012-101C3;0.83611!10085-102B4;0.703016!10482-107A5;0.849309!10419-106C5;0.178521!10080-102A8;0.177885!10760-110E4;0.0599636!10709-109H7;0.0375058!10710-109H8;0.0128157!10703-109H1;0.0153129!10719-109I8;0.550152!10642-109A3;0.172687!10177-103C6;0.188118!10164-103B2;0.359643!10173-103C2;0.757558!10166-103B4;0.271123!10083-102B2;0.720923!10188-103D8;0.535356!10552-107I3;0.74885!10553-107I4;0.118762!10013-101C4;0.0394636!10536-107G5;0.0255405!10618-108G6;0.246161!10423-106C9;0.13179!10785-110H2;0.821257!12238-129G6;0.467846!12239-129G7;0.0871294!12240-129G8;0.271884!10416-106C2;0.331257!10801-110I9;0.0814589!10766-110F1;0.0258087!10824-111C5;0.0637382!10825-111C6;0.119048!10826-111C7;0.109527!10454-106G4;0.101095!10409-106B4;0.0865155!10638-108I8;0.110789!10636-108I6;0.872904!10513-107D9;0.299001!10420-106C6;0.0781175!10082-102B1;0.132378!10014-101C5;0.0108896!10070-101I7;0.0141502!10452-106G2;0.00606286!10453-106G3;0.0577312!10449-106F8;0.0476424!10042-101F6;0.0534213!10069-101I6;0.496118!10193-103E4;0.365595!10631-108I1;0.423357!10438-106E6;0.0540507!10488-107B2;0.0331714!10196-103E7;0.432966!10071-101I8;0.0692465!10071-101I8;0.00412116!10041-101F5;0.259144!10451-106G1;0.60254!10450-106F9;0.0390832!10604-108F1;0.0688045!10605-108F2;0.127395!10606-108F3;0.106022!10603-108E9;0.0808421!10497-107C2;0.0635754!10448-106F7;0.4212!10643-109A4;0.805461!10426-106D3;0.0315832!10431-106D8;0.0446158!10197-103E8;0.00887081!10443-106F2;0.134546!10815-111B5;0.839112!10816-111B6;0.231498!10817-111B7;0.215514!10015-101C6;0.229986!10410-106B5;0.0239911!10054-101G9;0.0792066!10758-110E2;0.0745757!10711-109H9;0.123903!10040-101F4;0.0925034!10470-106I2;0.751063!10415-106C1;0.016686!10198-103E9;0.0362614!10614-108G2;0.0350291!10612-108F9;0.0344609!10549-107H9;0.0569421!10615-108G3;0.214594!10487-107B1;0.130296!10433-106E1;0.165792!10688-109F4;0.0939759!10444-106F3;0.0614986!10444-106F3;0.399169!10485-107A8;0.416648!10413-106B8;0.391579!10175-103C4;0.0176518!10161-103A8;0.759147!12131-128D7;0.852264!10624-108H3;0.666975!10712-109I1;0.481558!10205-103F7;0.0672325!10206-103F8;0.14736!10207-103F9;0.199324!10050-101G5;0.122075!10051-101G6;0.0428689!10016-101C7;0.134434!10046-101G1;0.110972!10778-110G4;0.182325!10633-108I3;0.373042!10818-111B8;0.89503!10819-111B9;0.058318!10820-111C1;0.0887834!10484-107A7;0.0599542!10808-111A7;0.236359!10169-103B7;0.0862448!10153-102I9;0.572242!13425-144D5;0.815746!13433-144E4;0.328066!13437-144E8;0.406453!11904-125F5;0.522426!11905-125F6;0.945768!10039-101F3;0.104931!10791-110H8;0.856418!10017-101C8;0.0574047!10045-101F9;0.0256816!10509-107D5;0.0359708!10839-111E2;0.200758!10692-109F8;0.411757!10079-102A7;0.0133445!10078-102A6;0.385499!10721-110A1;0.248787!10569-108B2;0.264994!10570-108B3;0.889076!10571-108B4;0.783872!10647-109A8;0.41806!10752-110D5;0.478309!10782-110G8;0.0568583!10726-110A6;0.149511!10018-101C9;0.161406!10086-102B5;0.390102!10182-103D2;0.467083!10165-103B3;0.439782!10499-107C4;0.709249!10408-106B3;0.345651!10019-101D1;0.0423855!10068-101I5;0.0442071!10075-102A3;0.0191893!10077-102A5;0.0471307!10727-110A7;0.980218!10775-110G1;0.0503201!10412-106B7;0.0755521!12231-129F8;0.785835!12232-129F9;0.109663!12233-129G1;0.110148!12234-129G2;0.140666!10414-106B9;0.188359!10170-103B8;0.692213!10183-103D3;0.317431!10150-102I6;0.382911!10174-103C3;0.844783!10155-103A2;0.261512!10038-101F2;0.519752!10838-111E1;0.234097!10759-110E3;0.174548!10514-107E1;0.0875177!10465-106H6;0.8214!10691-109F7;0.903231!10843-111E6;0.074347!10844-111E7;0.043433!11747-123G1;0.220009!11748-123G2;0.109531!11749-123G3;0.189844!11750-123G4;0.146804!11751-123G5;0.802956!11840-124H4;0.725663!11752-123G6;0.597488!11753-123G7;0.585081!11754-123G8;0.656316!11755-123G9;0.24044!11756-123H1;0.356606!11833-124G6;0.854243!11760-123H5;0.0996118!11836-124G9;0.782554!11758-123H3;0.237898!11835-124G8;0.307527!11762-123H7;0.226419!11838-124H2;0.21032!11757-123H2;0.118245!11759-123H4;0.365487!11761-123H6;0.162844!11842-124H6;0.0774829!11837-124H1;0.369628!10568-108B1;0.447081!13230-141I8;0.658528!13231-141I9;0.331597!10696-109G3;0.818916!10493-107B7;0.130036!10494-107B8;0.0506505!10850-111F4;0.238288!10851-111F5;0.0621412!10852-111F6;0.11266!10853-111F7;0.0566428!10854-111F8;0.532879!10855-111F9;0.396705!10856-111G1;0.0641741!10847-111F1;0.162902!10846-111E9;0.0576881!10848-111F2;0.0961111!10845-111E8;0.795875!10857-111G2;0.455375!10858-111G3;0.808736!10156-103A3;0.59264!11901-125F2;0.91384!11902-125F3;0.512362!11903-125F4;0.181971!10689-109F5;0.544872!10648-109A9;0.371193!10784-110H1;0.817343!10744-110C6;0.0704276!10772-110F7;0.102625!10474-106I6;0.0190319!10600-108E6;0.0846226!10684-109E9;0.548602!12226-129F3;0.183821!12227-129F4;0.0299036!10508-107D4;0.0815876!10539-107G8;0.0883756!10607-108F4;0.0488047!10555-107I6;0.0607652!10774-110F9;0.0573153!10637-108I7;0.0314921!10663-109C6;0.0475282!10728-110A8;0.0616254!10729-110A9;0.0267044!10430-106D7;0.141601!10730-110B1;0.0926522!10813-111B3;0.306265!10812-111B2;0.442805!10037-101F1;0.444134!10172-103C1;0.874417!10163-103B1;0.282154!10076-102A4;0.945335!10073-102A1;0.568028!10036-101E9;0.305981!10195-103E6;0.824956!10277-104E7;0.747215!10434-106E2;0.467755!10550-107I1;0.0664194!10545-107H5;0.0387739!10544-107H4;0.0517894!10704-109H2;0.152505!10510-107D6;0.333007!10558-107I9;0.839321!10020-101D2;0.556564!10732-110B3;0.144613!10049-101G4;0.282703!10698-109G5;0.117079!10437-106E5;0.917056!10417-106C3;0.484774!10035-101E8;0.0129618!10171-103B9;0.966139!10157-103A4;0.364665!10034-101E7;0.774833!10072-101I9;0.889301!10199-103F1;0.246274!10200-103F2;0.0628811!10697-109G4;0.171953!10723-110A3;0.0654055!10179-103C8;0.052259!10160-103A7;0.326998!10180-103C9;0.174524!10162-103A9;0.19568!10021-101D3;0.720294!10840-111E3;0.0885839!10706-109H4;0.0771113!10033-101E6;0.172169!10032-101E5;0.876233!10490-107B4;0.949924!10439-106E7;0.0401838!10022-101D4;0.0382035!10176-103C5;0.0461783!10469-106I1;0.573572!10067-101I4;0.0235409!10411-106B6;0.0195731!10471-106I3;0.032698!10030-101E3;0.123806!10475-106I7;0.0593535!10787-110H4;0.128654!10477-106I9;0.0841121!10695-109G2;0.0344186!11771-123I7;0.463349!11772-123I8;0.105929!11773-123I9;0.0704874!10093-102C3;0.0663633!10442-106F1;0.0295826!10442-106F1;0.0603996!10201-103F3;0.0431745!10639-108I9;0.144842!11843-124H7;0.0237233!11841-124H5;0.0251601!10693-109F9;0.610323!10436-106E4;0.0559132!10483-107A6;0.134846!10282-104F3;0.011861!10023-101D5;0.0656878!10066-101I3;0.763451!10065-101I2;0.806862!10800-110I8;0.0830688!10610-108F7;0.644586!10841-111E4;0.82438!10541-107H1;0.0643206!10842-111E5;0.261471!10562-108A4;0.197296!10024-101D6;0.50891!10064-101I1;0.00701406!10609-108F6;0.00495197!10048-101G3;0.996103!10781-110G7;0.109983!10181-103D1;0.565818!10159-103A6;0.900027!10056-101H2;0.675878!10737-110B8;0.834628!10025-101D7;0.14538!10044-101F8;0.642492!10424-106D1;0.250277!10463-106H4;0.0932667!10616-108G4;0.0455246!10486-107A9;0.242917!10062-101H8;0.94946!10202-103F4;0.028435!10158-103A5;0.0489163!10441-106E9;0.683233!10031-101E4;0.0853896!10063-101H9;0.776449!10063-101H9;0.350458!11763-123H8;0.0180299!11765-123I1;0.956973!11768-123I4;0.330409!10807-111A6;0.42432!10790-110H7;0.265355!10798-110I6;0.12196!10786-110H3;0.114208!10591-108D6;0.209914!10593-108D8;0.260214!10590-108D5;0.400757!10026-101D8;0.924083!10096-102C6;0.995628!10168-103B6;0.231669!10154-103A1;0.768804!10209-103G2;0.814505!10061-101H7;0.0839835!10027-101D9;0.148411!10043-101F7;0.0685441!10783-110G9;0.307117!10028-101E1;0.962514!10060-101H6;0.0893064!10203-103F5;0.0849415!10059-101H5;0.0455018!10047-101G2;0.0703687!10029-101E2;0.0293304!10058-101H4;0.0403708!10418-106C4;0.106162!10492-107B6;0.101066!10694-109G1;0.84458!10797-110I5;0.660551!10057-101H3;0.0472692!10100-102D1;0.184103!10055-101H1;0.0474169!10204-103F6;0.0185004!10191-103E2;0.0554887!10563-108A5;0.44949 | ||
|name=motif359 | |name=motif359 | ||
|tomtom_result=SP1#MA0079.2;2;1.53771e-05;0.00731951;0.0145735;8;GGGAGGGG;GGGGGCGGGG;-!Klf4#MA0039.2;1;0.00039584;0.18842;0.187576;8;GGGAGGGG;TGGGTGGGGC;+!YML081W#MA0431.1;0;0.00114961;0.547214;0.299091;8;GGGAGGGG;GTGCGGGGT;-!SP1#MA0079.2;1;0.00126233;0.600871;0.299091;8;GGGAGGGG;GGGGCGGGGT;+!RGM1#MA0366.1;-3;0.00216778;1.03186;0.356496;5;GGGAGGGG;AGGGG;+!MSN4#MA0342.1;-3;0.00260934;1.24204;0.356496;5;GGGAGGGG;AGGGG;+!MZF1_5-13#MA0057.1;-1;0.00263308;1.25335;0.356496;7;GGGAGGGG;GGAGGGGGAA;+!YGR067C#MA0425.1;5;0.00362676;1.72634;0.418397;8;GGGAGGGG;TGAAAAAGTGGGGT;-!MSN2#MA0341.1;-3;0.00397322;1.89125;0.418397;5;GGGAGGGG;AGGGG;+!RREB1#MA0073.1;1;0.00532555;2.53496;0.504723;8;GGGAGGGG;TGGGGGGGGGTGGTTTGGGG;-!IXR1#MA0323.1;5;0.00733689;3.49236;0.573648;8;GGGAGGGG;AAGCCGGAAGCGGGG;+!MIG2#MA0338.1;-1;0.00786864;3.74547;0.573648;7;GGGAGGGG;TGCGGGG;-!YPR022C#MA0436.1;-1;0.00786864;3.74547;0.573648;7;GGGAGGGG;CGTGGGG;-!btd#MA0443.1;3;0.00934302;4.44728;0.611457;7;GGGAGGGG;AGGGGGCGGA;+!MIG3#MA0339.1;-1;0.00967762;4.60655;0.611457;7;GGGAGGGG;TGCGGGG;-!CHA4#MA0283.1;-1;0.0109264;5.20094;0.647208;7;GGGAGGGG;GGCGGAGA;+!Pax4#MA0068.1;0;0.0130397;6.20688;0.707553;8;GGGAGGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!INSM1#MA0155.1;1;0.0134383;6.39661;0.707553;8;GGGAGGGG;TGTCAGGGGGCG;+!GABPA#MA0062.2;2;0.0185808;8.84446;0.849574;8;GGGAGGGG;CCGGAAGTGGC;+!Macho-1#MA0118.1;1;0.018843;8.96926;0.849574;8;GGGAGGGG;TGGGGGGTC;+!SPI1#MA0080.1;0;0.0198462;9.44681;0.849574;6;GGGAGGGG;CGGAAG;+!Klf4#MA0039.2;3;0.0208289;9.91455;0.849574;7;GGGAGGGG;TAAAGGAAGG;+ | |||
}} | }} |
Latest revision as of 14:10, 7 September 2012
Full Name: motif359
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
SP1#MA0079.2 | 2 | 1.53771e-05 | 0.00731951 | 0.0145735 | 8 | GGGAGGGG | GGGGGCGGGG | - |
Klf4#MA0039.2 | 1 | 0.00039584 | 0.18842 | 0.187576 | 8 | GGGAGGGG | TGGGTGGGGC | + |
YML081W#MA0431.1 | 0 | 0.00114961 | 0.547214 | 0.299091 | 8 | GGGAGGGG | GTGCGGGGT | - |
SP1#MA0079.2 | 1 | 0.00126233 | 0.600871 | 0.299091 | 8 | GGGAGGGG | GGGGCGGGGT | + |
RGM1#MA0366.1 | -3 | 0.00216778 | 1.03186 | 0.356496 | 5 | GGGAGGGG | AGGGG | + |
MSN4#MA0342.1 | -3 | 0.00260934 | 1.24204 | 0.356496 | 5 | GGGAGGGG | AGGGG | + |
MZF1_5-13#MA0057.1 | -1 | 0.00263308 | 1.25335 | 0.356496 | 7 | GGGAGGGG | GGAGGGGGAA | + |
YGR067C#MA0425.1 | 5 | 0.00362676 | 1.72634 | 0.418397 | 8 | GGGAGGGG | TGAAAAAGTGGGGT | - |
MSN2#MA0341.1 | -3 | 0.00397322 | 1.89125 | 0.418397 | 5 | GGGAGGGG | AGGGG | + |
RREB1#MA0073.1 | 1 | 0.00532555 | 2.53496 | 0.504723 | 8 | GGGAGGGG | TGGGGGGGGGTGGTTTGGGG | - |
IXR1#MA0323.1 | 5 | 0.00733689 | 3.49236 | 0.573648 | 8 | GGGAGGGG | AAGCCGGAAGCGGGG | + |
MIG2#MA0338.1 | -1 | 0.00786864 | 3.74547 | 0.573648 | 7 | GGGAGGGG | TGCGGGG | - |
YPR022C#MA0436.1 | -1 | 0.00786864 | 3.74547 | 0.573648 | 7 | GGGAGGGG | CGTGGGG | - |
btd#MA0443.1 | 3 | 0.00934302 | 4.44728 | 0.611457 | 7 | GGGAGGGG | AGGGGGCGGA | + |
MIG3#MA0339.1 | -1 | 0.00967762 | 4.60655 | 0.611457 | 7 | GGGAGGGG | TGCGGGG | - |
CHA4#MA0283.1 | -1 | 0.0109264 | 5.20094 | 0.647208 | 7 | GGGAGGGG | GGCGGAGA | + |
Pax4#MA0068.1 | 0 | 0.0130397 | 6.20688 | 0.707553 | 8 | GGGAGGGG | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
INSM1#MA0155.1 | 1 | 0.0134383 | 6.39661 | 0.707553 | 8 | GGGAGGGG | TGTCAGGGGGCG | + |
GABPA#MA0062.2 | 2 | 0.0185808 | 8.84446 | 0.849574 | 8 | GGGAGGGG | CCGGAAGTGGC | + |
Macho-1#MA0118.1 | 1 | 0.018843 | 8.96926 | 0.849574 | 8 | GGGAGGGG | TGGGGGGTC | + |
SPI1#MA0080.1 | 0 | 0.0198462 | 9.44681 | 0.849574 | 6 | GGGAGGGG | CGGAAG | + |
Klf4#MA0039.2 | 3 | 0.0208289 | 9.91455 | 0.849574 | 7 | GGGAGGGG | TAAAGGAAGG | + |