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MacroAPE 1083:CNhs11986 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;208.68174411923903;132.73471899752178;24.02129788213573;93.53243674295169!2;272.97072585039643;96.31190658502858;70.58610087022255;19.101464...")
 
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10H6;0.420088!10828-111C9;0.970761!10788-110H5;0.892615!10792-110H9;0.614835!10765-110E9;0.932364!10829-111D1;0.42117!10830-111D2;0.148209!10831-111D3;0.729572!10832-111D4;0.730516!10833-111D5;0.141045!10764-110E8;0.237167!10770-110F5;0.359289!10399-106A3;0.314403!10400-106A4;0.376065!10405-106A9;0.243431!10834-111D6;0.261257!10835-111D7;0.222165!10836-111D8;0.0757026!10837-111D9;0.136989!10699-109G6;0.289682!10802-111A1;0.554169!10796-110I4;0.398362!10010-101C1;0.536808!10810-111A9;0.302025!10421-106C7;0.31793!10708-109H6;0.208743!12235-129G3;0.814564!12236-129G4;0.484723!12237-129G5;0.0968285!10167-103B5;0.637561!10151-102I7;0.361471!10428-106D5;0.215997!10795-110I3;0.442022!10805-111A4;0.458699!10052-101G7;0.47008!10189-103D9;0.227717!10589-108D4;0.658036!10425-106D2;0.0130477!10427-106D4;0.985063!10702-109G9;0.181065!10432-106D9;0.734047!10496-107C1;0.554024!10718-109I7;0.591079!10011-101C2;0.320338!10053-101G8;0.466245!10686-109F2;0.547069!10084-102B3;0.657028!10012-101C3;0.0430282!10085-102B4;0.096383!10482-107A5;0.362724!10419-106C5;0.207526!10080-102A8;0.58146!10760-110E4;0.435187!10709-109H7;0.278187!10710-109H8;0.856855!10703-109H1;0.2243!10719-109I8;0.214454!10642-109A3;0.410204!10177-103C6;0.662321!10164-103B2;0.397458!10173-103C2;0.349676!10166-103B4;0.399967!10083-102B2;0.327649!10188-103D8;0.337985!10552-107I3;0.314511!10553-107I4;0.0343395!10013-101C4;0.0663244!10536-107G5;0.376155!10618-108G6;0.635594!10423-106C9;0.56084!10785-110H2;0.810478!12238-129G6;0.388632!12239-129G7;0.973773!12240-129G8;0.19063!10416-106C2;0.720862!10801-110I9;0.586889!10766-110F1;0.677924!10824-111C5;0.13456!10825-111C6;0.371886!10826-111C7;0.216099!10454-106G4;0.301028!10409-106B4;0.12437!10638-108I8;0.0471115!10636-108I6;0.442271!10513-107D9;0.0537887!10420-106C6;0.869204!10082-102B1;0.497128!10014-101C5;0.871519!10070-101I7;0.536416!10452-106G2;0.481113!10453-106G3;0.813309!10449-106F8;0.889265!10042-101F6;0.991535!10069-101I6;0.107707!10193-103E4;0.200634!10631-108I1;0.308336!10438-106E6;0.452618!10488-107B2;0.156165!10196-103E7;0.739352!10071-101I8;0.55147!10071-101I8;0.09568!10041-101F5;0.845506!10451-106G1;0.925678!10450-106F9;0.0394104!10604-108F1;0.0640417!10605-108F2;0.929082!10606-108F3;0.686259!10603-108E9;0.637162!10497-107C2;0.869742!10448-106F7;0.208544!10643-109A4;0.319408!10426-106D3;0.191501!10431-106D8;0.180159!10197-103E8;0.436737!10443-106F2;0.284395!10815-111B5;0.611684!10816-111B6;0.023619!10817-111B7;0.0285289!10015-101C6;0.0232406!10410-106B5;0.401522!10054-101G9;0.0361907!10758-110E2;0.00904991!10711-109H9;0.698208!10040-101F4;0.940575!10470-106I2;0.182941!10415-106C1;0.0835846!10198-103E9;0.878863!10614-108G2;0.961551!10612-108F9;0.648274!10549-107H9;0.338875!10615-108G3;0.677451!10487-107B1;0.841373!10433-106E1;0.0855675!10688-109F4;0.566812!10444-106F3;0.0175643!10444-106F3;0.779351!10485-107A8;0.835554!10413-106B8;0.968859!10175-103C4;0.628266!10161-103A8;0.18821!12131-128D7;0.219066!10624-108H3;0.229465!10712-109I1;0.99392!10205-103F7;0.883722!10206-103F8;0.0608209!10207-103F9;0.166021!10050-101G5;0.212765!10051-101G6;0.210774!10016-101C7;0.123491!10046-101G1;0.246493!10778-110G4;0.0863396!10633-108I3;0.628112!10818-111B8;0.0985385!10819-111B9;0.100199!10820-111C1;0.105905!10484-107A7;0.0949901!10808-111A7;0.883344!10169-103B7;0.124458!10153-102I9;0.394268!13425-144D5;0.251461!13433-144E4;0.604135!13437-144E8;0.629996!11904-125F5;0.839178!11905-125F6;0.0559316!10039-101F3;0.141059!10791-110H8;0.120063!10017-101C8;0.443558!10045-101F9;0.582283!10509-107D5;0.299104!10839-111E2;0.951271!10692-109F8;0.715703!10079-102A7;0.742612!10078-102A6;0.00935061!10721-110A1;0.297508!10569-108B2;0.571067!10570-108B3;0.672752!10571-108B4;0.587424!10647-109A8;0.681956!10752-110D5;0.752801!10782-110G8;0.209634!10726-110A6;0.716881!10018-101C9;0.773132!10086-102B5;0.312686!10182-103D2;0.291173!10165-103B3;0.0273592!10499-107C4;0.0802785!10408-106B3;0.695597!10019-101D1;0.936259!10068-101I5;0.597591!10075-102A3;0.447317!10077-102A5;0.614322!10727-110A7;0.385654!10775-110G1;0.229132!10412-106B7;0.433104!12231-129F8;0.94551!12232-129F9;0.998623!12233-129G1;0.946707!12234-129G2;0.692241!10414-106B9;0.717682!10170-103B8;0.985038!10183-103D3;0.322898!10150-102I6;0.129578!10174-103C3;0.146865!10155-103A2;0.0193888!10038-101F2;0.0514145!10838-111E1;0.0307746!10759-110E3;0.341942!10514-107E1;0.964638!10465-106H6;0.899139!10691-109F7;0.799525!10843-111E6;0.608756!10844-111E7;0.10734!11747-123G1;0.0227016!11748-123G2;0.771815!11749-123G3;0.599483!11750-123G4;0.723063!11751-123G5;0.660222!11840-124H4;0.554168!11752-123G6;0.869284!11753-123G7;0.462828!11754-123G8;0.219169!11755-123G9;0.744291!11756-123H1;0.878516!11833-124G6;0.942974!11760-123H5;0.430604!11836-124G9;0.852448!11758-123H3;0.778773!11835-124G8;0.797233!11762-123H7;0.990995!11838-124H2;0.582368!11757-123H2;0.833819!11759-123H4;0.845372!11761-123H6;0.864619!11842-124H6;0.57609!11837-124H1;0.303649!10568-108B1;0.665065!13230-141I8;0.568626!13231-141I9;0.531802!10696-109G3;0.488888!10493-107B7;0.310006!10494-107B8;0.8051!10850-111F4;0.649341!10851-111F5;0.687554!10852-111F6;0.683639!10853-111F7;0.482629!10854-111F8;0.988628!10855-111F9;0.623792!10856-111G1;0.885075!10847-111F1;0.981538!10846-111E9;0.751044!10848-111F2;0.692474!10845-111E8;0.722473!10857-111G2;0.403808!10858-111G3;0.534153!10156-103A3;0.277524!11901-125F2;0.178838!11902-125F3;0.365191!11903-125F4;0.195259!10689-109F5;0.278639!10648-109A9;0.104136!10784-110H1;0.779685!10744-110C6;0.504236!10772-110F7;0.262184!10474-106I6;0.384114!10600-108E6;0.261998!10684-109E9;0.692651!12226-129F3;0.733286!12227-129F4;0.53846!10508-107D4;0.529026!10539-107G8;0.715258!10607-108F4;0.780645!10555-107I6;0.384996!10774-110F9;0.37051!10637-108I7;0.184413!10663-109C6;0.226435!10728-110A8;0.734141!10729-110A9;0.458427!10430-106D7;0.321266!10730-110B1;0.754051!10813-111B3;0.832992!10812-111B2;0.666697!10037-101F1;0.260637!10172-103C1;0.170145!10163-103B1;0.171056!10076-102A4;0.161076!10073-102A1;0.224394!10036-101E9;0.516818!10195-103E6;0.0633999!10277-104E7;0.232401!10434-106E2;0.151259!10550-107I1;0.33624!10545-107H5;0.0693999!10544-107H4;0.455354!10704-109H2;0.521621!10510-107D6;0.429775!10558-107I9;0.733768!10020-101D2;0.224541!10732-110B3;0.652172!10049-101G4;0.916384!10698-109G5;0.276357!10437-106E5;0.982971!10417-106C3;0.76545!10035-101E8;0.227993!10171-103B9;0.120354!10157-103A4;0.0445215!10034-101E7;0.236231!10072-101I9;0.14428!10199-103F1;0.458106!10200-103F2;0.318045!10697-109G4;0.177926!10723-110A3;0.0839832!10179-103C8;0.19872!10160-103A7;0.00141929!10180-103C9;1.57803e-05!10162-103A9;0.638474!10021-101D3;0.565984!10840-111E3;0.574642!10706-109H4;0.223254!10033-101E6;0.82268!10032-101E5;0.0350795!10490-107B4;0.12134!10439-106E7;0.619044!10022-101D4;0.487799!10176-103C5;0.499791!10469-106I1;0.478734!10067-101I4;0.663965!10411-106B6;0.509524!10471-106I3;0.184514!10030-101E3;0.373443!10475-106I7;0.000505007!10787-110H4;0.609739!10477-106I9;0.64759!10695-109G2;0.923742!11771-123I7;0.714913!11772-123I8;0.228073!11773-123I9;0.749362!10093-102C3;0.850898!10442-106F1;0.140943!10442-106F1;0.554608!10201-103F3;0.621976!10639-108I9;0.891831!11843-124H7;0.684925!11841-124H5;0.708422!10693-109F9;0.753686!10436-106E4;0.0315625!10483-107A6;0.400277!10282-104F3;0.121875!10023-101D5;0.0522081!10066-101I3;0.229927!10065-101I2;0.119272!10800-110I8;0.545297!10610-108F7;0.774289!10841-111E4;0.9676!10541-107H1;0.076454!10842-111E5;0.317842!10562-108A4;0.709709!10024-101D6;0.988088!10064-101I1;0.447611!10609-108F6;0.515891!10048-101G3;0.621808!10781-110G7;0.24642!10181-103D1;0.0997356!10159-103A6;0.0608133!10056-101H2;0.193002!10737-110B8;0.33291!10025-101D7;0.994659!10044-101F8;0.41025!10424-106D1;0.865543!10463-106H4;0.0639714!10616-108G4;0.358097!10486-107A9;0.57516!10062-101H8;0.618529!10202-103F4;0.77604!10158-103A5;0.195918!10441-106E9;0.231512!10031-101E4;0.697331!10063-101H9;0.0651128!10063-101H9;0.87096!11763-123H8;0.484636!11765-123I1;0.9299!11768-123I4;0.951234!10807-111A6;0.753389!10790-110H7;0.315288!10798-110I6;0.370891!10786-110H3;0.498111!10591-108D6;0.216704!10593-108D8;0.206149!10590-108D5;0.0497199!10026-101D8;0.831348!10096-102C6;0.913556!10168-103B6;0.633884!10154-103A1;0.0299721!10209-103G2;0.164786!10061-101H7;0.455348!10027-101D9;0.289975!10043-101F7;0.44205!10783-110G9;0.708713!10028-101E1;0.727254!10060-101H6;0.822422!10203-103F5;0.567313!10059-101H5;0.172814!10047-101G2;0.0965715!10029-101E2;0.607737!10058-101H4;0.237127!10418-106C4;0.251078!10492-107B6;0.61992!10694-109G1;0.582985!10797-110I5;0.40111!10057-101H3;0.562692!10100-102D1;0.213431!10055-101H1;0.353357!10204-103F6;0.820489!10191-103E2;0.67441!10563-108A5;0.232555
|name=CNhs11986_bu_f1
|name=CNhs11986_bu_f1
|tomtom_result=YPR015C#MA0435.1;2;0.0077727;3.6998;1;12;AAAGGATTTGCT;TGTAAGGATTTACGTCTTCA;-!SUM1#MA0398.1;-1;0.00948036;4.51265;1;9;AAAGGATTTGCT;AAAAATTTT;-!SFP1#MA0378.1;5;0.00953517;4.53874;1;12;AAAGGATTTGCT;ATTGAAAAAAATTTTCTACGG;+!oc#MA0234.1;-3;0.0107339;5.10933;1;6;AAAGGATTTGCT;GGATTA;-!bcd#MA0212.1;-3;0.0115777;5.511;1;6;AAAGGATTTGCT;GGATTA;-!Gsc#MA0190.1;-3;0.0205912;9.8014;1;6;AAAGGATTTGCT;GGATTA;-!Pax4#MA0068.1;8;0.0209434;9.96907;1;12;AAAGGATTTGCT;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-
}}
}}

Latest revision as of 14:26, 7 September 2012

Full Name: CNhs11986_bu_f1

Motif matrix
POACGT
1208.68174411923903132.7347189975217824.0212978821357393.53243674295169
2272.9707258503964396.3119065850285870.5861008702225519.101464436200636
3195.849061400113350.3488113235090880.5369931727679132.2353318454578
47.2587922498120237.617148747436657423.3755972146082620.71865952999131
5198.0605438308630812.142426216781267239.855081656329938.912146037873853
6271.2535452344018130.83922015698647.53825835317449649.33917399728537
712.20788787478675618.55276651313847210.57555101073276417.63399234319047
879.800327109346748.489384347289766.991646295825662363.68883998938645
9103.7661555879804412.46735407148397118.80496395528084323.93172412710317
1073.762820972492713.73629689911765206.97484397988185164.49623589035588
1163.9940536237204186.54885906508324138.5874892772871869.83979577575732
127.27834852024292331.663061249045796112.11670915987078307.9120788126889

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YPR015C#MA0435.120.00777273.6998112AAAGGATTTGCTTGTAAGGATTTACGTCTTCA-
SUM1#MA0398.1-10.009480364.5126519AAAGGATTTGCTAAAAATTTT-
SFP1#MA0378.150.009535174.53874112AAAGGATTTGCTATTGAAAAAAATTTTCTACGG+
oc#MA0234.1-30.01073395.1093316AAAGGATTTGCTGGATTA-
bcd#MA0212.1-30.01157775.51116AAAGGATTTGCTGGATTA-
Gsc#MA0190.1-30.02059129.801416AAAGGATTTGCTGGATTA-
Pax4#MA0068.180.02094349.96907112AAAGGATTTGCTGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
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