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MacroAPE 1083:CNhs13793 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1069.331735908838;1273.2752643585895;521.2195219839474;558.8810018166083!2;952.8500485289304;1307.2680833240483;137.63792484198902;1024.9514...")
 
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0534-107G3;0.0448864!10429-106D6;0.0514672!10464-106H5;0.215416!10827-111C8;0.190461!10789-110H6;0.155637!10828-111C9;0.0188166!10788-110H5;0.0338352!10792-110H9;0.0216481!10765-110E9;0.089904!10829-111D1;0.0382797!10830-111D2;0.0390025!10831-111D3;0.0808613!10832-111D4;0.084788!10833-111D5;0.0224637!10764-110E8;0.0467588!10770-110F5;0.0149945!10399-106A3;0.119615!10400-106A4;0.00752253!10405-106A9;0.0111016!10834-111D6;0.00899051!10835-111D7;0.0301392!10836-111D8;0.0940327!10837-111D9;0.0398884!10699-109G6;0.197023!10802-111A1;0.120373!10796-110I4;0.217006!10010-101C1;0.00746707!10810-111A9;0.0755647!10421-106C7;0.184131!10708-109H6;0.0841004!12235-129G3;0.0473765!12236-129G4;0.099543!12237-129G5;0.828183!10167-103B5;0.159876!10151-102I7;0.0012338!10428-106D5;0.00138416!10795-110I3;0.62182!10805-111A4;0.00870899!10052-101G7;0.130157!10189-103D9;0.0376222!10589-108D4;0.123171!10425-106D2;0.28278!10427-106D4;0.947201!10702-109G9;0.0712449!10432-106D9;0.255159!10496-107C1;0.00679286!10718-109I7;0.0148962!10011-101C2;0.0196478!10053-101G8;0.0604506!10686-109F2;0.458763!10084-102B3;0.404914!10012-101C3;0.000996157!10085-102B4;0.000716664!10482-107A5;0.00307119!10419-106C5;0.0486391!10080-102A8;0.0122876!10760-110E4;0.265976!10709-109H7;0.0307014!10710-109H8;0.00142575!10703-109H1;0.0251503!10719-109I8;0.966956!10642-109A3;0.895001!10177-103C6;0.668756!10164-103B2;0.000938917!10173-103C2;0.00124284!10166-103B4;0.00991322!10083-102B2;0.00501744!10188-103D8;0.00259632!10552-107I3;0.00142018!10553-107I4;0.0202257!10013-101C4;0.022934!10536-107G5;0.0846646!10618-108G6;0.694912!10423-106C9;0.083597!10785-110H2;0.0103711!12238-129G6;0.00657764!12239-129G7;0.407279!12240-129G8;0.805091!10416-106C2;0.470381!10801-110I9;0.183209!10766-110F1;0.0362717!10824-111C5;0.0541908!10825-111C6;0.00526395!10826-111C7;0.00431496!10454-106G4;0.00421415!10409-106B4;0.0125569!10638-108I8;0.0645838!10636-108I6;0.00703964!10513-107D9;0.000997376!10420-106C6;0.109943!10082-102B1;0.262186!10014-101C5;0.181638!10070-101I7;0.129495!10452-106G2;0.11269!10453-106G3;0.244206!10449-106F8;0.231117!10042-101F6;0.203072!10069-101I6;0.000669396!10193-103E4;0.0345287!10631-108I1;0.000519356!10438-106E6;0.0518589!10488-107B2;0.0127922!10196-103E7;0.0214801!10071-101I8;0.157939!10071-101I8;0.0132146!10041-101F5;0.00274392!10451-106G1;0.021493!10450-106F9;0.085772!10604-108F1;0.0382376!10605-108F2;0.0615847!10606-108F3;0.0322216!10603-108E9;0.0383856!10497-107C2;0.0248514!10448-106F7;0.0190505!10643-109A4;0.232519!10426-106D3;0.0117987!10431-106D8;0.00909379!10197-103E8;0.00779002!10443-106F2;0.0604125!10815-111B5;0.0013606!10816-111B6;0.0286163!10817-111B7;0.0227811!10015-101C6;0.0286092!10410-106B5;0.141539!10054-101G9;0.365399!10758-110E2;0.00950639!10711-109H9;0.203245!10040-101F4;0.121941!10470-106I2;0.00145278!10415-106C1;0.0141842!10198-103E9;0.00772644!10614-108G2;0.047663!10612-108F9;0.306986!10549-107H9;0.00497677!10615-108G3;0.183919!10487-107B1;0.453938!10433-106E1;0.00441001!10688-109F4;0.00540988!10444-106F3;0.00638558!10444-106F3;0.493977!10485-107A8;0.543889!10413-106B8;0.193193!10175-103C4;0.603243!10161-103A8;0.000466864!12131-128D7;0.000591176!10624-108H3;0.137496!10712-109I1;0.848552!10205-103F7;0.0882694!10206-103F8;0.0203655!10207-103F9;0.0182389!10050-101G5;0.237652!10051-101G6;0.593939!10016-101C7;0.159756!10046-101G1;0.0955629!10778-110G4;0.0238763!10633-108I3;0.227056!10818-111B8;0.20684!10819-111B9;0.031315!10820-111C1;0.0336054!10484-107A7;0.0293545!10808-111A7;0.0908252!10169-103B7;0.116197!10153-102I9;0.00189343!13425-144D5;0.00128638!13433-144E4;0.590683!13437-144E8;0.807883!11904-125F5;0.766282!11905-125F6;0.116158!10039-101F3;0.037457!10791-110H8;0.00131636!10017-101C8;0.0354734!10045-101F9;0.25159!10509-107D5;0.15183!10839-111E2;0.00152031!10692-109F8;0.213246!10079-102A7;0.0127543!10078-102A6;0.0190119!10721-110A1;0.17747!10569-108B2;0.248281!10570-108B3;0.0725519!10571-108B4;0.011457!10647-109A8;0.00252662!10752-110D5;0.247735!10782-110G8;0.0332359!10726-110A6;0.379513!10018-101C9;0.0670466!10086-102B5;0.885307!10182-103D2;0.937233!10165-103B3;0.000660881!10499-107C4;0.000941265!10408-106B3;0.0568624!10019-101D1;0.00425077!10068-101I5;0.289774!10075-102A3;0.341095!10077-102A5;0.243782!10727-110A7;0.105427!10775-110G1;0.129006!10412-106B7;0.0196865!12231-129F8;0.0334679!12232-129F9;0.556264!12233-129G1;0.35777!12234-129G2;0.563719!10414-106B9;0.776945!10170-103B8;0.0606532!10183-103D3;0.002343!10150-102I6;0.00160015!10174-103C3;0.00140473!10155-103A2;0.00166539!10038-101F2;0.00177149!10838-111E1;0.000542352!10759-110E3;0.94471!10514-107E1;0.370398!10465-106H6;0.160724!10691-109F7;0.658534!10843-111E6;0.0726349!10844-111E7;0.522669!11747-123G1;0.712359!11748-123G2;0.536846!11749-123G3;0.812121!11750-123G4;0.840201!11751-123G5;0.81728!11840-124H4;0.668542!11752-123G6;0.439846!11753-123G7;0.844547!11754-123G8;0.458127!11755-123G9;0.821728!11756-123H1;0.408857!11833-124G6;0.889002!11760-123H5;0.840487!11836-124G9;0.992765!11758-123H3;0.68918!11835-124G8;0.721172!11762-123H7;0.466046!11838-124H2;0.963155!11757-123H2;0.263615!11759-123H4;0.717187!11761-123H6;0.98982!11842-124H6;0.745633!11837-124H1;0.833943!10568-108B1;0.421206!13230-141I8;0.418215!13231-141I9;0.157942!10696-109G3;0.25603!10493-107B7;0.308112!10494-107B8;0.253004!10850-111F4;0.535746!10851-111F5;0.113258!10852-111F6;0.483095!10853-111F7;0.660391!10854-111F8;0.0312656!10855-111F9;0.457487!10856-111G1;0.70196!10847-111F1;0.749623!10846-111E9;0.629781!10848-111F2;0.335728!10845-111E8;0.31829!10857-111G2;0.14869!10858-111G3;0.0935178!10156-103A3;0.255113!11901-125F2;0.00149317!11902-125F3;0.0800217!11903-125F4;0.279107!10689-109F5;0.0962394!10648-109A9;0.0301454!10784-110H1;0.934872!10744-110C6;0.0127223!10772-110F7;0.459903!10474-106I6;0.0197817!10600-108E6;0.856521!10684-109E9;0.192271!12226-129F3;0.0396809!12227-129F4;0.0134953!10508-107D4;0.110443!10539-107G8;0.223753!10607-108F4;0.162154!10555-107I6;0.275558!10774-110F9;0.273576!10637-108I7;0.0528395!10663-109C6;0.709444!10728-110A8;0.917643!10729-110A9;0.199239!10430-106D7;0.199036!10730-110B1;0.127116!10813-111B3;0.103243!10812-111B2;0.169534!10037-101F1;0.163892!10172-103C1;0.00108722!10163-103B1;0.00230407!10076-102A4;0.00134031!10073-102A1;0.00118429!10036-101E9;0.00257953!10195-103E6;0.000933246!10277-104E7;0.00123653!10434-106E2;0.000429486!10550-107I1;0.0305593!10545-107H5;0.0337283!10544-107H4;0.0217767!10704-109H2;0.0155168!10510-107D6;0.841567!10558-107I9;0.0727495!10020-101D2;0.154169!10732-110B3;0.0686679!10049-101G4;0.549037!10698-109G5;0.710992!10437-106E5;0.0235084!10417-106C3;0.0559197!10035-101E8;0.000415448!10171-103B9;0.00121689!10157-103A4;0.00129539!10034-101E7;0.00160163!10072-101I9;0.00110594!10199-103F1;0.00883789!10200-103F2;0.501505!10697-109G4;0.0368302!10723-110A3;0.551544!10179-103C8;0.0128683!10160-103A7;0.00233943!10180-103C9;0.00472116!10162-103A9;0.0180461!10021-101D3;0.0276243!10840-111E3;0.573075!10706-109H4;0.0646291!10033-101E6;0.0110162!10032-101E5;0.000340591!10490-107B4;0.00124554!10439-106E7;0.0209061!10022-101D4;0.00586969!10176-103C5;0.0424485!10469-106I1;0.00106483!10067-101I4;0.014268!10411-106B6;0.0100786!10471-106I3;0.0465113!10030-101E3;0.000271448!10475-106I7;0.00517613!10787-110H4;0.330371!10477-106I9;0.24505!10695-109G2;0.855508!11771-123I7;0.0481643!11772-123I8;0.00994048!11773-123I9;0.0219789!10093-102C3;0.179455!10442-106F1;0.604502!10442-106F1;0.00320317!10201-103F3;0.018084!10639-108I9;0.0552986!11843-124H7;0.00130959!11841-124H5;0.0445312!10693-109F9;0.157088!10436-106E4;0.000404613!10483-107A6;0.00662966!10282-104F3;0.0151018!10023-101D5;0.287147!10066-101I3;0.159569!10065-101I2;0.0339768!10800-110I8;0.0776633!10610-108F7;0.401467!10841-111E4;0.742239!10541-107H1;0.576889!10842-111E5;0.246526!10562-108A4;0.814636!10024-101D6;0.693502!10064-101I1;0.154145!10609-108F6;0.0582757!10048-101G3;0.883957!10781-110G7;0.0262792!10181-103D1;0.553262!10159-103A6;0.00128428!10056-101H2;0.0015155!10737-110B8;0.00101157!10025-101D7;0.602358!10044-101F8;0.250355!10424-106D1;0.0904696!10463-106H4;0.0945868!10616-108G4;0.0261531!10486-107A9;0.00441163!10062-101H8;0.00226776!10202-103F4;0.0762629!10158-103A5;0.115398!10441-106E9;0.00041317!10031-101E4;0.263862!10063-101H9;0.00102015!10063-101H9;0.00301792!11763-123H8;0.00724068!11765-123I1;0.409002!11768-123I4;0.581409!10807-111A6;0.51507!10790-110H7;0.461837!10798-110I6;0.481713!10786-110H3;0.43146!10591-108D6;0.0922259!10593-108D8;0.115415!10590-108D5;0.173332!10026-101D8;0.0269203!10096-102C6;0.585068!10168-103B6;0.548278!10154-103A1;0.00114522!10209-103G2;0.000930937!10061-101H7;0.182555!10027-101D9;0.0741496!10043-101F7;0.24927!10783-110G9;0.595569!10028-101E1;0.00829232!10060-101H6;0.851874!10203-103F5;0.0669679!10059-101H5;0.136343!10047-101G2;0.169821!10029-101E2;0.421602!10058-101H4;0.504079!10418-106C4;0.0790424!10492-107B6;0.0197665!10694-109G1;0.00108086!10797-110I5;0.680622!10057-101H3;0.0279876!10100-102D1;0.173443!10055-101H1;0.0589187!10204-103F6;0.10669!10191-103E2;0.119102!10563-108A5;0.0135586
|name=CNhs13793_bl_f2
|name=CNhs13793_bl_f2
|tomtom_result=CUP2#MA0287.1;-3;0.00144958;0.690002;0.756766;6;CCTCAGCAG;CAGCAAAAATG;+!SWI5#MA0402.1;0;0.00229046;1.09026;0.756766;8;CCTCAGCAG;AACCAGCA;-!NFE2L2#MA0150.1;3;0.00238477;1.13515;0.756766;8;CCTCAGCAG;ATGACTCAGCA;+!ACE2#MA0267.1;-1;0.00326037;1.55194;0.775969;7;CCTCAGCAG;ACCAGCA;+!NHLH1#MA0048.1;0;0.0068987;3.28378;0.900321;9;CCTCAGCAG;GCGCAGCTGCGT;+!Mafb#MA0117.1;1;0.00733585;3.49186;0.900321;7;CCTCAGCAG;GCGTCAGC;-!BRCA1#MA0133.1;-2;0.0086531;4.11888;0.900321;7;CCTCAGCAG;ACAACAC;+!REST#MA0138.2;-2;0.00882582;4.20109;0.900321;7;CCTCAGCAG;TCAGCACCATGGACAGCGC;-!REST#MA0138.2;-1;0.00945716;4.50161;0.900321;8;CCTCAGCAG;TTCAGCACCATGGACAGCGCC;+!Tal1::Gata1#MA0140.1;9;0.0107809;5.13172;0.933041;9;CCTCAGCAG;CTTATCTGTCCCCACCAG;-!CRZ1#MA0285.1;-1;0.0141732;6.74645;1;8;CCTCAGCAG;CTAAGCCAC;+!PHD1#MA0355.1;2;0.0146658;6.98094;1;8;CCTCAGCAG;ACCTGCAGCA;+!Myf#MA0055.1;0;0.0180962;8.61377;1;9;CCTCAGCAG;CAGCAGCTGCTG;+!SOK2#MA0385.1;2;0.0197242;9.3887;1;9;CCTCAGCAG;ACCTGCAGGCA;+
}}
}}

Latest revision as of 14:36, 7 September 2012

Full Name: CNhs13793_bl_f2

Motif matrix
POACGT
11069.3317359088381273.2752643585895521.2195219839474558.8810018166083
2952.85004852893041307.2680833240483137.637924841989021024.9514673730164
3964.4084077877412469.13230979127354883.02047013977781106.1463363491891
45.0226981223273443407.6394297010015.0226981223273445.022698122327344
53422.70752406798240.00.00.0
60.00.03422.70752406798240.0
71089.5749408044072294.390413384108310.54304062824339828.19912925121654
81965.3972587808646835.637458107997819.504577837977575602.1682293411397
91028.2013266786116939.24627018139921202.912339726506252.34758748146558

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CUP2#MA0287.1-30.001449580.6900020.7567666CCTCAGCAGCAGCAAAAATG+
SWI5#MA0402.100.002290461.090260.7567668CCTCAGCAGAACCAGCA-
NFE2L2#MA0150.130.002384771.135150.7567668CCTCAGCAGATGACTCAGCA+
ACE2#MA0267.1-10.003260371.551940.7759697CCTCAGCAGACCAGCA+
NHLH1#MA0048.100.00689873.283780.9003219CCTCAGCAGGCGCAGCTGCGT+
Mafb#MA0117.110.007335853.491860.9003217CCTCAGCAGGCGTCAGC-
BRCA1#MA0133.1-20.00865314.118880.9003217CCTCAGCAGACAACAC+
REST#MA0138.2-20.008825824.201090.9003217CCTCAGCAGTCAGCACCATGGACAGCGC-
REST#MA0138.2-10.009457164.501610.9003218CCTCAGCAGTTCAGCACCATGGACAGCGCC+
Tal1::Gata1#MA0140.190.01078095.131720.9330419CCTCAGCAGCTTATCTGTCCCCACCAG-
CRZ1#MA0285.1-10.01417326.7464518CCTCAGCAGCTAAGCCAC+
PHD1#MA0355.120.01466586.9809418CCTCAGCAGACCTGCAGCA+
Myf#MA0055.100.01809628.6137719CCTCAGCAGCAGCAGCTGCTG+
SOK2#MA0385.120.01972429.388719CCTCAGCAGACCTGCAGGCA+
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