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MacroAPE 1083:CNhs12838 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;365.1544045621496;143.06246405286765;436.99961177247826;596.5558576321837!2;503.1919326677644;88.06668740699016;588.1819563160325;362.331761...")
 
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4855!10597-108E3;0.0383295!10717-109I6;0.00766961!10455-106G5;0.00345409!10534-107G3;0.666691!10429-106D6;0.199355!10464-106H5;0.730456!10827-111C8;0.508178!10789-110H6;0.4543!10828-111C9;0.854207!10788-110H5;0.67602!10792-110H9;0.760542!10765-110E9;0.284065!10829-111D1;0.713609!10830-111D2;0.917861!10831-111D3;0.756852!10832-111D4;0.750543!10833-111D5;0.463173!10764-110E8;0.766208!10770-110F5;0.615311!10399-106A3;0.538492!10400-106A4;0.596898!10405-106A9;0.554556!10834-111D6;0.49588!10835-111D7;0.473547!10836-111D8;0.0719294!10837-111D9;0.0828534!10699-109G6;0.715692!10802-111A1;0.10475!10796-110I4;0.075701!10010-101C1;0.00996134!10810-111A9;0.0589634!10421-106C7;0.00250342!10708-109H6;0.903706!12235-129G3;0.0129693!12236-129G4;0.653283!12237-129G5;0.887509!10167-103B5;0.397091!10151-102I7;0.130644!10428-106D5;0.0673244!10795-110I3;0.043491!10805-111A4;0.569674!10052-101G7;0.0481902!10189-103D9;0.195968!10589-108D4;0.095363!10425-106D2;0.208312!10427-106D4;0.165017!10702-109G9;0.61654!10432-106D9;0.963677!10496-107C1;0.00652097!10718-109I7;0.0977556!10011-101C2;0.292993!10053-101G8;0.14074!10686-109F2;0.00138689!10084-102B3;0.17675!10012-101C3;0.0412147!10085-102B4;0.0260354!10482-107A5;0.769525!10419-106C5;0.00987275!10080-102A8;0.00140797!10760-110E4;0.76963!10709-109H7;0.051777!10710-109H8;0.039577!10703-109H1;0.0930421!10719-109I8;0.0532186!10642-109A3;0.12009!10177-103C6;0.0342031!10164-103B2;0.0450009!10173-103C2;0.0252058!10166-103B4;0.319771!10083-102B2;0.249712!10188-103D8;0.152508!10552-107I3;0.0943077!10553-107I4;0.028384!10013-101C4;0.00853604!10536-107G5;0.0990018!10618-108G6;0.0604316!10423-106C9;0.00610243!10785-110H2;0.0451517!12238-129G6;0.0275987!12239-129G7;0.268601!12240-129G8;0.842069!10416-106C2;0.0960993!10801-110I9;0.237948!10766-110F1;0.5698!10824-111C5;0.881219!10825-111C6;0.00869476!10826-111C7;0.0121658!10454-106G4;0.00872127!10409-106B4;0.0102914!10638-108I8;0.209717!10636-108I6;0.012747!10513-107D9;0.0242889!10420-106C6;0.0095001!10082-102B1;0.0102575!10014-101C5;0.407867!10070-101I7;0.154084!10452-106G2;0.103862!10453-106G3;0.128331!10449-106F8;0.374666!10042-101F6;0.279883!10069-101I6;0.0484473!10193-103E4;0.0287883!10631-108I1;0.0647712!10438-106E6;0.389979!10488-107B2;0.133962!10196-103E7;0.0280816!10071-101I8;0.397374!10071-101I8;0.120534!10041-101F5;0.708489!10451-106G1;0.00830967!10450-106F9;0.0251274!10604-108F1;0.00744034!10605-108F2;0.00399811!10606-108F3;0.00346371!10603-108E9;0.00406837!10497-107C2;0.0118073!10448-106F7;0.207941!10643-109A4;0.00182615!10426-106D3;0.0372616!10431-106D8;0.0394471!10197-103E8;0.00795071!10443-106F2;0.00599944!10815-111B5;0.0023015!10816-111B6;0.0327254!10817-111B7;0.0258559!10015-101C6;0.0256897!10410-106B5;0.0180249!10054-101G9;0.017466!10758-110E2;0.0184593!10711-109H9;0.0312065!10040-101F4;0.00504424!10470-106I2;0.0763459!10415-106C1;0.0413821!10198-103E9;0.0173874!10614-108G2;0.059138!10612-108F9;0.0253883!10549-107H9;0.0223391!10615-108G3;0.00337893!10487-107B1;0.108271!10433-106E1;0.0506945!10688-109F4;0.0019535!10444-106F3;0.116277!10444-106F3;0.0828404!10485-107A8;0.09561!10413-106B8;0.00637056!10175-103C4;5.84544e-05!10161-103A8;0.124095!12131-128D7;0.0344676!10624-108H3;0.510441!10712-109I1;0.0858676!10205-103F7;0.938984!10206-103F8;0.109342!10207-103F9;0.194345!10050-101G5;0.626873!10051-101G6;0.133674!10016-101C7;0.0359099!10046-101G1;0.0538212!10778-110G4;0.244955!10633-108I3;0.770726!10818-111B8;0.0174261!10819-111B9;0.00571009!10820-111C1;0.00350593!10484-107A7;0.00604255!10808-111A7;0.00662291!10169-103B7;0.491718!10153-102I9;0.0827377!13425-144D5;0.0395537!13433-144E4;0.025972!13437-144E8;0.0200573!11904-125F5;0.029976!11905-125F6;0.72436!10039-101F3;0.714285!10791-110H8;0.0488152!10017-101C8;0.221171!10045-101F9;0.104285!10509-107D5;0.454321!10839-111E2;0.0188017!10692-109F8;0.271997!10079-102A7;0.000196896!10078-102A6;0.0205595!10721-110A1;0.040938!10569-108B2;0.055024!10570-108B3;0.0594515!10571-108B4;0.332207!10647-109A8;0.249073!10752-110D5;0.00916489!10782-110G8;0.227632!10726-110A6;0.0385042!10018-101C9;0.000547952!10086-102B5;0.0429949!10182-103D2;0.138517!10165-103B3;0.139148!10499-107C4;0.0218257!10408-106B3;0.00638296!10019-101D1;0.0620108!10068-101I5;0.0509176!10075-102A3;0.417037!10077-102A5;0.0629077!10727-110A7;0.00664607!10775-110G1;0.722571!10412-106B7;0.846784!12231-129F8;0.0503997!12232-129F9;0.10761!12233-129G1;0.198003!12234-129G2;0.135811!10414-106B9;0.018183!10170-103B8;0.0284539!10183-103D3;0.123869!10150-102I6;0.075308!10174-103C3;0.0403538!10155-103A2;0.101725!10038-101F2;0.025464!10838-111E1;0.0155756!10759-110E3;0.00655526!10514-107E1;8.04464e-05!10465-106H6;0.0208655!10691-109F7;0.0387551!10843-111E6;0.0142208!10844-111E7;0.131841!11747-123G1;0.143165!11748-123G2;0.395352!11749-123G3;0.257951!11750-123G4;0.95259!11751-123G5;0.935891!11840-124H4;0.36912!11752-123G6;0.157823!11753-123G7;0.808332!11754-123G8;0.658863!11755-123G9;0.628984!11756-123H1;0.938356!11833-124G6;0.106999!11760-123H5;0.363188!11836-124G9;0.384961!11758-123H3;0.729305!11835-124G8;0.867269!11762-123H7;0.756224!11838-124H2;0.859796!11757-123H2;0.998262!11759-123H4;0.530533!11761-123H6;0.411169!11842-124H6;0.540522!11837-124H1;0.731357!10568-108B1;0.94191!13230-141I8;0.574344!13231-141I9;0.760133!10696-109G3;0.720461!10493-107B7;0.0317251!10494-107B8;0.000445424!10850-111F4;0.0106178!10851-111F5;0.00483477!10852-111F6;0.00790683!10853-111F7;0.0303887!10854-111F8;0.00359794!10855-111F9;0.0408587!10856-111G1;0.274781!10847-111F1;0.02771!10846-111E9;0.00396895!10848-111F2;0.0051605!10845-111E8;9.93111e-05!10857-111G2;0.0252433!10858-111G3;0.0651099!10156-103A3;0.00805438!11901-125F2;0.0489754!11902-125F3;0.887907!11903-125F4;0.698967!10689-109F5;0.860203!10648-109A9;0.00210481!10784-110H1;0.0645338!10744-110C6;0.028683!10772-110F7;0.434794!10474-106I6;0.518249!10600-108E6;0.322224!10684-109E9;0.0342919!12226-129F3;0.436354!12227-129F4;0.162892!10508-107D4;0.402694!10539-107G8;0.255858!10607-108F4;0.0296444!10555-107I6;0.129059!10774-110F9;0.10572!10637-108I7;0.0425794!10663-109C6;0.0634457!10728-110A8;0.182556!10729-110A9;0.0286604!10430-106D7;0.38816!10730-110B1;0.0441951!10813-111B3;0.238181!10812-111B2;0.169928!10037-101F1;0.590618!10172-103C1;0.0341423!10163-103B1;0.0890417!10076-102A4;0.0454014!10073-102A1;0.101532!10036-101E9;0.905826!10195-103E6;0.0517456!10277-104E7;0.0470835!10434-106E2;0.378296!10550-107I1;0.00938755!10545-107H5;0.00737658!10544-107H4;0.119083!10704-109H2;0.0325136!10510-107D6;0.0282618!10558-107I9;0.025553!10020-101D2;0.0154262!10732-110B3;0.317439!10049-101G4;0.022147!10698-109G5;0.0407613!10437-106E5;0.0204301!10417-106C3;0.0240682!10035-101E8;0.0164761!10171-103B9;0.0629436!10157-103A4;0.118729!10034-101E7;0.0627947!10072-101I9;0.065326!10199-103F1;0.919144!10200-103F2;0.0180846!10697-109G4;0.0186334!10723-110A3;0.20095!10179-103C8;0.00183133!10160-103A7;0.091502!10180-103C9;0.0275889!10162-103A9;0.0686702!10021-101D3;0.141098!10840-111E3;0.133834!10706-109H4;0.821649!10033-101E6;0.00150793!10032-101E5;0.0327618!10490-107B4;0.0455696!10439-106E7;0.0117737!10022-101D4;0.00420532!10176-103C5;0.191309!10469-106I1;0.0746286!10067-101I4;0.00970708!10411-106B6;0.891529!10471-106I3;0.35514!10030-101E3;0.0221648!10475-106I7;0.0619604!10787-110H4;0.0431551!10477-106I9;0.004437!10695-109G2;0.0737189!11771-123I7;0.434702!11772-123I8;0.00094139!11773-123I9;0.00450706!10093-102C3;0.0298337!10442-106F1;0.0280153!10442-106F1;0.0166514!10201-103F3;0.0158994!10639-108I9;0.145775!11843-124H7;0.117983!11841-124H5;0.00530598!10693-109F9;0.00164164!10436-106E4;0.0464653!10483-107A6;0.253255!10282-104F3;0.205692!10023-101D5;0.0581501!10066-101I3;0.00678251!10065-101I2;0.117809!10800-110I8;0.0389473!10610-108F7;0.0707519!10841-111E4;0.0667469!10541-107H1;0.0153797!10842-111E5;0.036008!10562-108A4;0.0559172!10024-101D6;0.842089!10064-101I1;0.0991214!10609-108F6;0.164692!10048-101G3;0.990561!10781-110G7;0.237804!10181-103D1;0.487338!10159-103A6;0.135629!10056-101H2;0.0359251!10737-110B8;0.143314!10025-101D7;0.0842227!10044-101F8;0.0345794!10424-106D1;0.0876971!10463-106H4;0.483924!10616-108G4;0.0171948!10486-107A9;0.060108!10062-101H8;0.235386!10202-103F4;0.555355!10158-103A5;0.0263747!10441-106E9;0.036991!10031-101E4;0.00815351!10063-101H9;0.0430353!10063-101H9;0.904591!11763-123H8;0.0457954!11765-123I1;0.235528!11768-123I4;0.116459!10807-111A6;0.69011!10790-110H7;0.0066673!10798-110I6;0.00376649!10786-110H3;0.00703727!10591-108D6;0.00638545!10593-108D8;0.00278343!10590-108D5;0.00197303!10026-101D8;0.0129745!10096-102C6;0.0420762!10168-103B6;0.923934!10154-103A1;0.111809!10209-103G2;0.0350186!10061-101H7;0.00709047!10027-101D9;0.0575713!10043-101F7;0.00549169!10783-110G9;0.00472627!10028-101E1;0.00775462!10060-101H6;0.21582!10203-103F5;0.406185!10059-101H5;0.00775814!10047-101G2;0.0161932!10029-101E2;0.00156442!10058-101H4;0.0362873!10418-106C4;0.0693024!10492-107B6;0.000178583!10694-109G1;0.00247056!10797-110I5;0.10155!10057-101H3;0.010759!10100-102D1;0.0332058!10055-101H1;0.32755!10204-103F6;0.449159!10191-103E2;0.94978!10563-108A5;0.00816109
|name=CNhs12838_bl_f1
|name=CNhs12838_bl_f1
|tomtom_result=IXR1#MA0323.1;-2;0.00683895;3.25534;1;10;TGGAGCAGGGAG;AAGCCGGAAGCGGGG;+!PHD1#MA0355.1;0;0.00794557;3.78209;1;10;TGGAGCAGGGAG;TGCTGCAGGT;-!PPARG::RXRA#MA0065.2;1;0.00866341;4.12378;1;12;TGGAGCAGGGAG;GTAGGGCAAAGGTCA;+!Ar#MA0007.1;3;0.00946869;4.50709;1;12;TGGAGCAGGGAG;GGCGGGTACACGATGTTCTTAT;-!Tal1::Gata1#MA0140.1;5;0.010854;5.1665;1;12;TGGAGCAGGGAG;CTGGTGGGGACAGATAAG;+!HMG-I/Y#MA0045.1;-2;0.013823;6.57975;1;10;TGGAGCAGGGAG;CAACAAATGGAAAAAC;+!TAL1::TCF3#MA0091.1;-3;0.0147355;7.01408;1;9;TGGAGCAGGGAG;AACAGATGGTCG;-!Tcfcp2l1#MA0145.1;5;0.0165809;7.89251;1;9;TGGAGCAGGGAG;CTGGTTTGAACTGG;-!ELK1#MA0028.1;-2;0.0186981;8.9003;1;10;TGGAGCAGGGAG;GAGCCGGAAG;+!Klf4#MA0039.1;-3;0.0186981;8.9003;1;9;TGGAGCAGGGAG;TAAAGGAAGG;+!YGR067C#MA0425.1;0;0.0205398;9.77697;1;12;TGGAGCAGGGAG;TGAAAAAGTGGGGT;-
}}
}}

Latest revision as of 14:41, 7 September 2012

Full Name: CNhs12838_bl_f1

Motif matrix
POACGT
1365.1544045621496143.06246405286765436.99961177247826596.5558576321837
2503.191932667764488.06668740699016588.1819563160325362.3317616288924
3499.34081893331256216.21033760560385608.5536488084438217.66753267231869
41211.2797544140631.6602546956475992166.95812136771522161.8742075422521
5728.32570042823333.5571995787391124798.456783903741111.432654108963787
67.9224102859297021468.761615993881462.429776155849572.6585355840187264
71539.80006940805220.79567882130556690.91726622107325430.25932356924730093
828.9546353500840824.3738835153127271465.566688985451322.877130168830544
9657.8407900254698104.82174661351984720.724868027540458.38493335314793
10329.4980418732539165.1610475820624688.5006072397955358.61264132456625
11755.929737967426338.55085113568955658.80286755609788.4888813604649
12287.1896696369176197.58085258070372906.1926200431643150.809195758892

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
IXR1#MA0323.1-20.006838953.25534110TGGAGCAGGGAGAAGCCGGAAGCGGGG+
PHD1#MA0355.100.007945573.78209110TGGAGCAGGGAGTGCTGCAGGT-
PPARG::RXRA#MA0065.210.008663414.12378112TGGAGCAGGGAGGTAGGGCAAAGGTCA+
Ar#MA0007.130.009468694.50709112TGGAGCAGGGAGGGCGGGTACACGATGTTCTTAT-
Tal1::Gata1#MA0140.150.0108545.1665112TGGAGCAGGGAGCTGGTGGGGACAGATAAG+
HMG-I/Y#MA0045.1-20.0138236.57975110TGGAGCAGGGAGCAACAAATGGAAAAAC+
TAL1::TCF3#MA0091.1-30.01473557.0140819TGGAGCAGGGAGAACAGATGGTCG-
Tcfcp2l1#MA0145.150.01658097.8925119TGGAGCAGGGAGCTGGTTTGAACTGG-
ELK1#MA0028.1-20.01869818.9003110TGGAGCAGGGAGGAGCCGGAAG+
Klf4#MA0039.1-30.01869818.900319TGGAGCAGGGAGTAAAGGAAGG+
YGR067C#MA0425.100.02053989.77697112TGGAGCAGGGAGTGAAAAAGTGGGGT-
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