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MacroAPE 1083:CNhs12625 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;105.76484325220264;84.8076068266998;219.69797225777197;128.1228247346927!2;289.9191046877575;33.23198469328392;32.4255659460219;182.81659174...")
 
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;0.251135!10429-106D6;0.0837074!10464-106H5;0.178404!10827-111C8;0.149724!10789-110H6;0.805138!10828-111C9;0.0143828!10788-110H5;0.91625!10792-110H9;0.171146!10765-110E9;0.360356!10829-111D1;0.303504!10830-111D2;0.423368!10831-111D3;0.509983!10832-111D4;0.227619!10833-111D5;0.230552!10764-110E8;0.085638!10770-110F5;0.0499482!10399-106A3;0.12415!10400-106A4;0.0147651!10405-106A9;0.0233719!10834-111D6;0.00798969!10835-111D7;0.411753!10836-111D8;0.231898!10837-111D9;0.921926!10699-109G6;0.457737!10802-111A1;0.456017!10796-110I4;0.528603!10010-101C1;0.298482!10810-111A9;0.187156!10421-106C7;0.890663!10708-109H6;0.442763!12235-129G3;0.496107!12236-129G4;0.151584!12237-129G5;0.0752148!10167-103B5;0.414619!10151-102I7;0.132082!10428-106D5;0.196297!10795-110I3;0.175812!10805-111A4;0.0526149!10052-101G7;0.751057!10189-103D9;0.146669!10589-108D4;0.72649!10425-106D2;0.798311!10427-106D4;0.149674!10702-109G9;0.0323479!10432-106D9;0.172713!10496-107C1;0.959231!10718-109I7;0.617606!10011-101C2;0.0723078!10053-101G8;0.210875!10686-109F2;0.0162432!10084-102B3;0.585725!10012-101C3;0.223765!10085-102B4;0.146762!10482-107A5;0.524668!10419-106C5;0.792203!10080-102A8;0.710197!10760-110E4;0.245056!10709-109H7;0.464651!10710-109H8;0.243539!10703-109H1;0.547091!10719-109I8;0.537546!10642-109A3;0.675843!10177-103C6;0.649446!10164-103B2;0.101614!10173-103C2;0.341194!10166-103B4;0.429473!10083-102B2;0.622759!10188-103D8;0.650809!10552-107I3;0.193177!10553-107I4;0.858773!10013-101C4;0.714126!10536-107G5;0.13324!10618-108G6;0.993113!10423-106C9;0.902316!10785-110H2;0.541712!12238-129G6;0.0863761!12239-129G7;0.334532!12240-129G8;0.937503!10416-106C2;0.169527!10801-110I9;0.296796!10766-110F1;0.384881!10824-111C5;0.293973!10825-111C6;0.480317!10826-111C7;0.509526!10454-106G4;0.243604!10409-106B4;0.655663!10638-108I8;0.77977!10636-108I6;0.348898!10513-107D9;0.533473!10420-106C6;0.218268!10082-102B1;0.482039!10014-101C5;0.121159!10070-101I7;0.0885264!10452-106G2;0.144031!10453-106G3;0.278524!10449-106F8;0.114349!10042-101F6;0.187021!10069-101I6;0.0751463!10193-103E4;0.260339!10631-108I1;0.286719!10438-106E6;0.502001!10488-107B2;0.814157!10196-103E7;0.49417!10071-101I8;0.622579!10071-101I8;0.382598!10041-101F5;0.259807!10451-106G1;0.541793!10450-106F9;0.161244!10604-108F1;0.229114!10605-108F2;0.896729!10606-108F3;0.977685!10603-108E9;0.992281!10497-107C2;0.789843!10448-106F7;0.957407!10643-109A4;0.672388!10426-106D3;0.842744!10431-106D8;0.0919336!10197-103E8;0.846862!10443-106F2;0.160256!10815-111B5;0.851934!10816-111B6;0.720078!10817-111B7;0.832502!10015-101C6;0.617216!10410-106B5;0.0161689!10054-101G9;0.621434!10758-110E2;0.218192!10711-109H9;0.599243!10040-101F4;0.0563914!10470-106I2;0.21445!10415-106C1;0.783836!10198-103E9;0.660988!10614-108G2;0.339797!10612-108F9;0.594637!10549-107H9;0.733479!10615-108G3;0.539868!10487-107B1;0.555752!10433-106E1;0.678382!10688-109F4;0.24194!10444-106F3;0.125992!10444-106F3;0.266325!10485-107A8;0.280749!10413-106B8;0.369385!10175-103C4;0.659563!10161-103A8;0.0846586!12131-128D7;0.0921375!10624-108H3;0.150273!10712-109I1;0.824322!10205-103F7;0.074679!10206-103F8;0.326486!10207-103F9;0.155078!10050-101G5;0.686805!10051-101G6;0.0360245!10016-101C7;0.512508!10046-101G1;0.406228!10778-110G4;0.115928!10633-108I3;0.38107!10818-111B8;0.0677395!10819-111B9;0.269041!10820-111C1;0.288519!10484-107A7;0.234869!10808-111A7;0.593384!10169-103B7;0.338516!10153-102I9;0.214551!13425-144D5;0.22922!13433-144E4;0.644865!13437-144E8;0.72743!11904-125F5;0.809711!11905-125F6;0.372841!10039-101F3;0.211906!10791-110H8;0.24935!10017-101C8;0.324933!10045-101F9;0.659411!10509-107D5;0.198216!10839-111E2;0.897402!10692-109F8;0.206215!10079-102A7;0.810964!10078-102A6;0.537588!10721-110A1;0.371368!10569-108B2;0.870788!10570-108B3;0.246469!10571-108B4;0.756362!10647-109A8;0.182826!10752-110D5;0.561964!10782-110G8;0.770862!10726-110A6;0.826143!10018-101C9;0.643099!10086-102B5;0.529614!10182-103D2;0.71212!10165-103B3;0.166248!10499-107C4;0.189565!10408-106B3;0.202513!10019-101D1;0.0185456!10068-101I5;0.705257!10075-102A3;0.547319!10077-102A5;0.913452!10727-110A7;0.161167!10775-110G1;0.0111701!10412-106B7;0.00756748!12231-129F8;0.587327!12232-129F9;0.577845!12233-129G1;0.374273!12234-129G2;0.39374!10414-106B9;0.352447!10170-103B8;0.404972!10183-103D3;0.356297!10150-102I6;0.198525!10174-103C3;0.283911!10155-103A2;0.167561!10038-101F2;0.426091!10838-111E1;0.113039!10759-110E3;0.4843!10514-107E1;0.382104!10465-106H6;0.896547!10691-109F7;0.662479!10843-111E6;0.524135!10844-111E7;0.374895!11747-123G1;0.705684!11748-123G2;0.137021!11749-123G3;0.156329!11750-123G4;0.0937687!11751-123G5;0.882775!11840-124H4;0.686309!11752-123G6;0.498511!11753-123G7;0.484957!11754-123G8;0.725685!11755-123G9;0.198561!11756-123H1;0.779143!11833-124G6;0.849088!11760-123H5;0.481562!11836-124G9;0.367587!11758-123H3;0.125869!11835-124G8;0.15527!11762-123H7;0.126042!11838-124H2;0.309836!11757-123H2;0.817315!11759-123H4;0.691784!11761-123H6;0.140372!11842-124H6;0.401466!11837-124H1;0.458181!10568-108B1;0.197311!13230-141I8;0.000599857!13231-141I9;0.125938!10696-109G3;0.0381222!10493-107B7;0.154225!10494-107B8;0.570983!10850-111F4;0.95651!10851-111F5;0.684692!10852-111F6;0.420415!10853-111F7;0.94757!10854-111F8;0.636742!10855-111F9;0.397537!10856-111G1;0.866789!10847-111F1;0.85093!10846-111E9;0.280414!10848-111F2;0.875858!10845-111E8;0.4664!10857-111G2;0.284368!10858-111G3;0.0991101!10156-103A3;0.683982!11901-125F2;0.211258!11902-125F3;0.0939495!11903-125F4;0.064437!10689-109F5;0.142716!10648-109A9;0.413289!10784-110H1;0.811844!10744-110C6;0.473752!10772-110F7;0.0179196!10474-106I6;0.0420775!10600-108E6;0.0828448!10684-109E9;0.48465!12226-129F3;0.730326!12227-129F4;0.804595!10508-107D4;0.391217!10539-107G8;0.397701!10607-108F4;0.534077!10555-107I6;0.513768!10774-110F9;0.739735!10637-108I7;0.384539!10663-109C6;0.697058!10728-110A8;0.288062!10729-110A9;0.521523!10430-106D7;0.206712!10730-110B1;0.457835!10813-111B3;0.297764!10812-111B2;0.694277!10037-101F1;0.661587!10172-103C1;0.230854!10163-103B1;0.411504!10076-102A4;0.272889!10073-102A1;0.317561!10036-101E9;0.400463!10195-103E6;0.282701!10277-104E7;0.172841!10434-106E2;0.0284708!10550-107I1;0.571568!10545-107H5;0.781273!10544-107H4;0.758609!10704-109H2;0.565955!10510-107D6;0.406331!10558-107I9;0.787507!10020-101D2;0.49695!10732-110B3;0.122696!10049-101G4;0.354993!10698-109G5;0.0305752!10437-106E5;0.587067!10417-106C3;0.137317!10035-101E8;0.129183!10171-103B9;0.276577!10157-103A4;0.0867934!10034-101E7;0.33977!10072-101I9;0.196297!10199-103F1;0.398394!10200-103F2;0.79139!10697-109G4;0.0528026!10723-110A3;0.838431!10179-103C8;0.341162!10160-103A7;0.410609!10180-103C9;0.643114!10162-103A9;0.681568!10021-101D3;0.299749!10840-111E3;0.364583!10706-109H4;0.0111784!10033-101E6;0.818413!10032-101E5;0.213456!10490-107B4;0.219582!10439-106E7;0.420593!10022-101D4;0.548494!10176-103C5;0.157419!10469-106I1;0.286102!10067-101I4;0.300899!10411-106B6;0.119987!10471-106I3;0.636681!10030-101E3;0.34375!10475-106I7;0.513693!10787-110H4;0.612053!10477-106I9;0.915742!10695-109G2;0.982271!11771-123I7;0.0218047!11772-123I8;0.893643!11773-123I9;0.444305!10093-102C3;0.187083!10442-106F1;0.649818!10442-106F1;0.666874!10201-103F3;0.637043!10639-108I9;0.311662!11843-124H7;0.619453!11841-124H5;0.177328!10693-109F9;0.239725!10436-106E4;0.870132!10483-107A6;0.176534!10282-104F3;0.489312!10023-101D5;0.208948!10066-101I3;0.185971!10065-101I2;0.247704!10800-110I8;0.25074!10610-108F7;0.718788!10841-111E4;0.00351147!10541-107H1;0.900534!10842-111E5;0.94397!10562-108A4;0.793335!10024-101D6;0.53248!10064-101I1;0.165761!10609-108F6;0.189348!10048-101G3;0.107572!10781-110G7;0.383901!10181-103D1;0.965527!10159-103A6;0.0903!10056-101H2;0.153928!10737-110B8;0.0194088!10025-101D7;0.271746!10044-101F8;0.515568!10424-106D1;0.455754!10463-106H4;0.0256347!10616-108G4;0.60454!10486-107A9;0.152601!10062-101H8;0.323274!10202-103F4;0.547749!10158-103A5;0.363505!10441-106E9;0.0331167!10031-101E4;0.951733!10063-101H9;0.226329!10063-101H9;0.343905!11763-123H8;0.22767!11765-123I1;0.155259!11768-123I4;0.838169!10807-111A6;0.586036!10790-110H7;0.435624!10798-110I6;0.474939!10786-110H3;0.356407!10591-108D6;0.426722!10593-108D8;0.814943!10590-108D5;0.158246!10026-101D8;0.250842!10096-102C6;0.00533968!10168-103B6;0.0577982!10154-103A1;0.0383437!10209-103G2;0.175044!10061-101H7;0.303022!10027-101D9;0.136393!10043-101F7;0.571222!10783-110G9;0.830167!10028-101E1;0.0915161!10060-101H6;0.702596!10203-103F5;0.877722!10059-101H5;0.312685!10047-101G2;0.0588491!10029-101E2;0.346042!10058-101H4;0.101695!10418-106C4;0.139614!10492-107B6;0.032686!10694-109G1;0.377542!10797-110I5;0.11487!10057-101H3;0.637127!10100-102D1;0.107011!10055-101H1;0.325949!10204-103F6;0.022183!10191-103E2;0.106838!10563-108A5;0.427787
|name=CNhs12625_bl_f1
|name=CNhs12625_bl_f1
|tomtom_result=HMG-I/Y#MA0045.1;0;8.43794e-05;0.0401646;0.0803292;12;GAAAAAAGGTAT;CAACAAATGGAAAAAC;+!Hltf#MA0109.1;-1;0.00393264;1.87194;1;10;GAAAAAAGGTAT;ATATAAGGTT;-!SFL1#MA0377.1;9;0.00595147;2.8329;1;12;GAAAAAAGGTAT;TAGAGAATAGAAGAAATAAAA;+!SUM1#MA0398.1;-2;0.00642326;3.05747;1;9;GAAAAAAGGTAT;AAAAATTTT;-!STB3#MA0390.1;7;0.00670534;3.19174;1;12;GAAAAAAGGTAT;CCAGAGTGAAAAATTTTGGAC;-!AZF1#MA0277.1;-2;0.00778538;3.70584;1;9;GAAAAAAGGTAT;AAAAAGAAA;+!pan#MA0237.1;0;0.0101456;4.82932;1;8;GAAAAAAGGTAT;GATCAAAG;-!hb#MA0049.1;3;0.0133611;6.3599;1;7;GAAAAAAGGTAT;GCATAAAAAA;+!CUP2#MA0287.1;2;0.0148975;7.09122;1;9;GAAAAAAGGTAT;CAGCAAAAATG;+!Klf4#MA0039.1;1;0.0149523;7.11729;1;9;GAAAAAAGGTAT;TAAAGGAAGG;+!SFP1#MA0378.1;3;0.0156578;7.45312;1;12;GAAAAAAGGTAT;ATTGAAAAAAATTTTCTACGG;+!FKH1#MA0296.1;8;0.0168748;8.0324;1;12;GAAAAAAGGTAT;TGAATTGTAAACAAAGAGGA;+
}}
}}

Latest revision as of 14:49, 7 September 2012

Full Name: CNhs12625_bl_f1

Motif matrix
POACGT
1105.7648432522026484.8076068266998219.69797225777197128.1228247346927
2289.919104687757533.2319846932839232.4255659460219182.81659174430368
3316.92067155979661.8564724256938236150.1742675914387369.44183549443771
4283.6976098798722171.134207613487175.716653291625927.844776286382097
5534.06056575912251.68568054998313842.3186769101738710.3283238520879802
6506.2066076150291619.20844188484026612.6027354410689780.37546213042871796
7531.64468999546070.50604927357947395.2218964543004111.0206113480267787
81.28112739780089120.15430085088225293274.3310891359023262.6267296867815
9131.9484529412965244.62600479872355294.7184432559662467.1003460753808
10105.9083915146770540.34684127705833142.26284391693249.8751703627017
11252.83760243649147139.57452075485202107.5528095084116438.42831437161204
1298.0004430866257169.5909458288718258.07376259984071312.72809555602873

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HMG-I/Y#MA0045.108.43794e-050.04016460.080329212GAAAAAAGGTATCAACAAATGGAAAAAC+
Hltf#MA0109.1-10.003932641.87194110GAAAAAAGGTATATATAAGGTT-
SFL1#MA0377.190.005951472.8329112GAAAAAAGGTATTAGAGAATAGAAGAAATAAAA+
SUM1#MA0398.1-20.006423263.0574719GAAAAAAGGTATAAAAATTTT-
STB3#MA0390.170.006705343.19174112GAAAAAAGGTATCCAGAGTGAAAAATTTTGGAC-
AZF1#MA0277.1-20.007785383.7058419GAAAAAAGGTATAAAAAGAAA+
pan#MA0237.100.01014564.8293218GAAAAAAGGTATGATCAAAG-
hb#MA0049.130.01336116.359917GAAAAAAGGTATGCATAAAAAA+
CUP2#MA0287.120.01489757.0912219GAAAAAAGGTATCAGCAAAAATG+
Klf4#MA0039.110.01495237.1172919GAAAAAAGGTATTAAAGGAAGG+
SFP1#MA0378.130.01565787.45312112GAAAAAAGGTATATTGAAAAAAATTTTCTACGG+
FKH1#MA0296.180.01687488.0324112GAAAAAAGGTATTGAATTGTAAACAAAGAGGA+
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