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MacroAPE 1083:9-CTSASTCACTG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;4.302;513.372;183.552;15.774!2;16.491;258.837;4.302;437.37!3;124.758;172.08;276.045;144.117!4;526.278;17.925;154.872;17.925!5;10.038;387.18;...")
 
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205!10809-111A8;0.516637!10597-108E3;8.11641e-05!10717-109I6;0.00171365!10455-106G5;0.526221!10534-107G3;0.00829292!10429-106D6;0.0272717!10464-106H5;0.324106!10827-111C8;0.000750362!10789-110H6;0.0494629!10828-111C9;0.00720306!10788-110H5;0.172033!10792-110H9;0.0214594!10765-110E9;0.0223884!10829-111D1;0.0140696!10830-111D2;0.00236745!10831-111D3;0.0756387!10832-111D4;0.0213002!10833-111D5;0.00606438!10764-110E8;0.00320378!10770-110F5;0.00130312!10399-106A3;0.141814!10400-106A4;0.0143496!10405-106A9;0.00987432!10834-111D6;0.00467867!10835-111D7;0.0203172!10836-111D8;0.023227!10837-111D9;0.037002!10699-109G6;0.0321331!10802-111A1;0.0274958!10796-110I4;0.00614003!10010-101C1;0.0925187!10810-111A9;0.0332058!10421-106C7;3.19187e-05!10708-109H6;0.0936515!12235-129G3;0.0310874!12236-129G4;0.131832!12237-129G5;0.725129!10167-103B5;0.157292!10151-102I7;0.0718369!10428-106D5;0.0360435!10795-110I3;0.381546!10805-111A4;0.00299234!10052-101G7;0.0173694!10189-103D9;0.0352264!10589-108D4;0.201532!10425-106D2;0.0140777!10427-106D4;0.96667!10702-109G9;0.163127!10432-106D9;0.633821!10496-107C1;0.204631!10718-109I7;0.905825!10011-101C2;0.00130166!10053-101G8;0.0012058!10686-109F2;0.593371!10084-102B3;0.929204!10012-101C3;0.395391!10085-102B4;0.0736355!10482-107A5;0.800212!10419-106C5;0.0197572!10080-102A8;0.00382406!10760-110E4;0.120406!10709-109H7;0.000385916!10710-109H8;0.122089!10703-109H1;0.0340185!10719-109I8;0.00414436!10642-109A3;0.141698!10177-103C6;0.0249327!10164-103B2;0.0639254!10173-103C2;0.0463224!10166-103B4;0.0919055!10083-102B2;0.0220897!10188-103D8;0.379302!10552-107I3;0.0763349!10553-107I4;0.00501859!10013-101C4;0.538428!10536-107G5;0.00138956!10618-108G6;0.212237!10423-106C9;0.400119!10785-110H2;0.0807633!12238-129G6;0.269834!12239-129G7;0.0227711!12240-129G8;0.917247!10416-106C2;0.0871142!10801-110I9;0.00255154!10766-110F1;0.0187884!10824-111C5;0.0331478!10825-111C6;0.0929251!10826-111C7;0.0537868!10454-106G4;0.116427!10409-106B4;0.0123927!10638-108I8;0.00428628!10636-108I6;0.0228485!10513-107D9;0.0139305!10420-106C6;0.00207175!10082-102B1;0.00133267!10014-101C5;0.767353!10070-101I7;0.0406019!10452-106G2;0.144666!10453-106G3;0.282545!10449-106F8;0.0303192!10042-101F6;0.0248728!10069-101I6;0.121041!10193-103E4;0.522472!10631-108I1;0.222529!10438-106E6;0.0167031!10488-107B2;0.139495!10196-103E7;0.00757849!10071-101I8;0.200805!10071-101I8;0.274994!10041-101F5;0.232939!10451-106G1;0.000160661!10450-106F9;0.00250985!10604-108F1;0.0131782!10605-108F2;0.252441!10606-108F3;0.214561!10603-108E9;0.296128!10497-107C2;0.613757!10448-106F7;0.0233988!10643-109A4;0.202121!10426-106D3;0.0876543!10431-106D8;0.937974!10197-103E8;0.539139!10443-106F2;0.188036!10815-111B5;0.206686!10816-111B6;0.0541001!10817-111B7;0.090974!10015-101C6;0.0414299!10410-106B5;0.0225287!10054-101G9;0.527191!10758-110E2;0.0976905!10711-109H9;0.129064!10040-101F4;0.000571548!10470-106I2;0.137272!10415-106C1;0.0826501!10198-103E9;0.885154!10614-108G2;0.019944!10612-108F9;0.0273709!10549-107H9;0.0133404!10615-108G3;0.00144944!10487-107B1;0.673472!10433-106E1;0.94745!10688-109F4;0.176383!10444-106F3;0.986588!10444-106F3;0.784929!10485-107A8;0.97401!10413-106B8;0.0959104!10175-103C4;0.549991!10161-103A8;0.0521858!12131-128D7;0.0183675!10624-108H3;0.839159!10712-109I1;0.93679!10205-103F7;0.0221274!10206-103F8;0.021707!10207-103F9;0.0879294!10050-101G5;0.00287549!10051-101G6;0.792723!10016-101C7;0.441469!10046-101G1;0.280282!10778-110G4;0.105019!10633-108I3;0.304582!10818-111B8;0.33052!10819-111B9;0.279226!10820-111C1;0.227367!10484-107A7;0.344325!10808-111A7;0.0758035!10169-103B7;0.00162772!10153-102I9;0.0350898!13425-144D5;0.0326057!13433-144E4;0.0762364!13437-144E8;0.0556251!11904-125F5;0.0439672!11905-125F6;0.0677406!10039-101F3;0.057059!10791-110H8;0.16267!10017-101C8;0.000141134!10045-101F9;0.338865!10509-107D5;0.0264068!10839-111E2;0.351759!10692-109F8;0.898995!10079-102A7;0.207723!10078-102A6;0.583393!10721-110A1;0.823547!10569-108B2;0.000720359!10570-108B3;0.37266!10571-108B4;0.685541!10647-109A8;0.942282!10752-110D5;0.877207!10782-110G8;0.0485827!10726-110A6;0.28935!10018-101C9;0.290072!10086-102B5;0.630269!10182-103D2;0.895086!10165-103B3;0.0129035!10499-107C4;0.0160369!10408-106B3;0.0268434!10019-101D1;0.708084!10068-101I5;0.00690467!10075-102A3;0.0149928!10077-102A5;0.0321495!10727-110A7;0.721531!10775-110G1;0.243711!10412-106B7;0.000116549!12231-129F8;0.432525!12232-129F9;0.159797!12233-129G1;0.0526491!12234-129G2;0.206181!10414-106B9;0.329596!10170-103B8;0.0102229!10183-103D3;0.132269!10150-102I6;0.0727982!10174-103C3;0.0419513!10155-103A2;0.0507626!10038-101F2;0.0185204!10838-111E1;0.042558!10759-110E3;0.163909!10514-107E1;0.233466!10465-106H6;0.057531!10691-109F7;0.91434!10843-111E6;0.841252!10844-111E7;0.0962995!11747-123G1;0.504541!11748-123G2;0.143155!11749-123G3;0.826421!11750-123G4;0.850826!11751-123G5;0.399374!11840-124H4;0.83438!11752-123G6;0.239567!11753-123G7;0.830703!11754-123G8;0.0572331!11755-123G9;0.442506!11756-123H1;0.755002!11833-124G6;0.104627!11760-123H5;0.179896!11836-124G9;0.195306!11758-123H3;0.181385!11835-124G8;0.757113!11762-123H7;0.0738712!11838-124H2;0.0285589!11757-123H2;0.00851982!11759-123H4;0.167903!11761-123H6;0.759197!11842-124H6;0.0458958!11837-124H1;0.0383087!10568-108B1;0.0171524!13230-141I8;0.112848!13231-141I9;0.96862!10696-109G3;0.860683!10493-107B7;0.188286!10494-107B8;0.381501!10850-111F4;0.811326!10851-111F5;0.0728398!10852-111F6;0.383692!10853-111F7;0.0532294!10854-111F8;0.0351797!10855-111F9;0.536442!10856-111G1;0.440713!10847-111F1;0.24362!10846-111E9;0.311319!10848-111F2;0.737322!10845-111E8;0.379101!10857-111G2;0.00752401!10858-111G3;0.016659!10156-103A3;0.290189!11901-125F2;0.026552!11902-125F3;0.828889!11903-125F4;0.548794!10689-109F5;0.318237!10648-109A9;0.00889178!10784-110H1;0.280092!10744-110C6;0.705094!10772-110F7;0.00765093!10474-106I6;0.0121727!10600-108E6;0.0594042!10684-109E9;0.843748!12226-129F3;0.763977!12227-129F4;0.411753!10508-107D4;0.181159!10539-107G8;0.0505314!10607-108F4;0.0217621!10555-107I6;0.0044762!10774-110F9;0.322135!10637-108I7;0.000217768!10663-109C6;0.752596!10728-110A8;0.109998!10729-110A9;0.674548!10430-106D7;0.563309!10730-110B1;0.198356!10813-111B3;0.00916975!10812-111B2;0.401816!10037-101F1;0.923701!10172-103C1;0.114967!10163-103B1;0.158019!10076-102A4;0.0255297!10073-102A1;0.286681!10036-101E9;0.620689!10195-103E6;0.24758!10277-104E7;0.0549351!10434-106E2;0.102144!10550-107I1;0.107619!10545-107H5;0.0018122!10544-107H4;0.652554!10704-109H2;0.46124!10510-107D6;0.909725!10558-107I9;0.866157!10020-101D2;0.704101!10732-110B3;0.00159894!10049-101G4;0.610553!10698-109G5;0.88161!10437-106E5;0.21108!10417-106C3;0.259417!10035-101E8;0.599594!10171-103B9;0.183676!10157-103A4;0.0936376!10034-101E7;0.0343922!10072-101I9;0.155117!10199-103F1;0.39176!10200-103F2;0.864733!10697-109G4;0.135402!10723-110A3;0.403187!10179-103C8;0.0248338!10160-103A7;0.0109552!10180-103C9;0.0195455!10162-103A9;0.00120586!10021-101D3;0.00288864!10840-111E3;0.0625368!10706-109H4;0.260374!10033-101E6;0.362111!10032-101E5;0.0470674!10490-107B4;0.248585!10439-106E7;0.357518!10022-101D4;0.479243!10176-103C5;0.0124325!10469-106I1;0.0595519!10067-101I4;0.379898!10411-106B6;0.23016!10471-106I3;0.405122!10030-101E3;0.260962!10475-106I7;0.0327092!10787-110H4;0.00548802!10477-106I9;0.0307358!10695-109G2;0.582112!11771-123I7;0.0130276!11772-123I8;0.146032!11773-123I9;0.149031!10093-102C3;0.0491315!10442-106F1;0.842959!10442-106F1;0.116328!10201-103F3;0.251846!10639-108I9;0.040688!11843-124H7;0.482496!11841-124H5;0.22649!10693-109F9;0.0206061!10436-106E4;0.419803!10483-107A6;0.0442208!10282-104F3;0.286878!10023-101D5;0.68705!10066-101I3;0.323337!10065-101I2;0.934318!10800-110I8;0.278675!10610-108F7;0.0247199!10841-111E4;0.893174!10541-107H1;0.000769126!10842-111E5;0.0116163!10562-108A4;0.350363!10024-101D6;0.112175!10064-101I1;0.0869994!10609-108F6;0.455637!10048-101G3;0.214504!10781-110G7;0.0313003!10181-103D1;0.0274343!10159-103A6;0.00501178!10056-101H2;0.00688078!10737-110B8;0.172329!10025-101D7;0.699381!10044-101F8;0.0814183!10424-106D1;0.0797014!10463-106H4;0.0871338!10616-108G4;0.883495!10486-107A9;0.310092!10062-101H8;0.0631711!10202-103F4;0.0296574!10158-103A5;0.555607!10441-106E9;0.0123381!10031-101E4;0.534479!10063-101H9;0.19511!10063-101H9;0.579528!11763-123H8;0.156018!11765-123I1;0.738514!11768-123I4;0.318365!10807-111A6;0.802647!10790-110H7;0.0310608!10798-110I6;0.0565289!10786-110H3;0.365134!10591-108D6;0.153256!10593-108D8;0.88717!10590-108D5;0.609251!10026-101D8;0.203093!10096-102C6;0.74334!10168-103B6;0.309797!10154-103A1;0.0371258!10209-103G2;0.0186596!10061-101H7;0.499804!10027-101D9;0.588835!10043-101F7;0.823077!10783-110G9;0.135798!10028-101E1;0.0352014!10060-101H6;0.0865208!10203-103F5;0.0561334!10059-101H5;0.277706!10047-101G2;0.624431!10029-101E2;0.291101!10058-101H4;0.0252896!10418-106C4;0.358735!10492-107B6;0.371205!10694-109G1;0.57156!10797-110I5;0.0352804!10057-101H3;0.249919!10100-102D1;0.224728!10055-101H1;0.00518525!10204-103F6;0.10109!10191-103E2;0.000636215!10563-108A5;0.170589
|name=9-CTSASTCACTG,CNhs13543,BestGuess:NFE2.p2.SwissRegulon.nucfreq(0.727267229928719),T:717.0(9.78%),B:1675.4(4.03%),P:1e-100
|name=9-CTSASTCACTG,CNhs13543,BestGuess:NFE2.p2.SwissRegulon.nucfreq(0.727267229928719),T:717.0(9.78%),B:1675.4(4.03%),P:1e-100
|tomtom_result=Fos#MA0099.1;-1;0.000109912;0.052318;0.104361;8;CTGACTCACTG;TGACTCAC;-!NFE2L2#MA0150.1;2;0.00083732;0.398564;0.397515;9;CTGACTCACTG;TGCTGAGTCAT;-!AP1#MA0099.2;-1;0.00310178;1.47645;0.676732;7;CTGACTCACTG;TGACTCA;+!Mafb#MA0117.1;1;0.00356364;1.69629;0.676732;7;CTGACTCACTG;GCTGACGG;+!Tal1::Gata1#MA0140.1;7;0.00512787;2.44087;0.685333;11;CTGACTCACTG;CTTATCTGTCCCCACCAG;-!Trl#MA0205.1;-1;0.00557528;2.65384;0.685333;10;CTGACTCACTG;TTGCTCTCTC;+!Gfi#MA0038.1;-1;0.0058923;2.80473;0.685333;10;CTGACTCACTG;CAAATCACTG;+!GCN4#MA0303.1;6;0.00649867;3.09337;0.685333;11;CTGACTCACTG;CAAGGGATGAGTCATACTTCA;+!z#MA0255.1;1;0.00860213;4.09461;0.742516;9;CTGACTCACTG;AATCACTCAA;-!Pax2#MA0067.1;-3;0.0107347;5.10971;0.78404;8;CTGACTCACTG;AGTCACGG;+!YGR067C#MA0425.1;2;0.0168434;8.01747;0.997369;11;CTGACTCACTG;ACCCCACTTTTTTG;+!PPARG#MA0066.1;1;0.0183933;8.7552;0.997369;11;CTGACTCACTG;AGTAGGTCACCGTGACCTAC;-!ARG81#MA0272.1;-1;0.0192192;9.14835;0.997369;8;CTGACTCACTG;AGAGTCAC;-
}}
}}

Latest revision as of 15:04, 7 September 2012

Full Name: 9-CTSASTCACTG,CNhs13543,BestGuess:NFE2.p2.SwissRegulon.nucfreq(0.727267229928719),T:717.0(9.78%),B:1675.4(4.03%),P:1e-100

Motif matrix
POACGT
14.302513.372183.55215.774
216.491258.8374.302437.37
3124.758172.08276.045144.117
4526.27817.925154.87217.925
510.038387.18305.44214.34
6106.83316.491172.797420.879
7169.212331.97199.663116.154
8387.1810.755201.477117.588
9131.928415.8611.472157.74
10251.6677.88711.472445.974
112.151191.439342.009182.118

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Fos#MA0099.1-10.0001099120.0523180.1043618CTGACTCACTGTGACTCAC-
NFE2L2#MA0150.120.000837320.3985640.3975159CTGACTCACTGTGCTGAGTCAT-
AP1#MA0099.2-10.003101781.476450.6767327CTGACTCACTGTGACTCA+
Mafb#MA0117.110.003563641.696290.6767327CTGACTCACTGGCTGACGG+
Tal1::Gata1#MA0140.170.005127872.440870.68533311CTGACTCACTGCTTATCTGTCCCCACCAG-
Trl#MA0205.1-10.005575282.653840.68533310CTGACTCACTGTTGCTCTCTC+
Gfi#MA0038.1-10.00589232.804730.68533310CTGACTCACTGCAAATCACTG+
GCN4#MA0303.160.006498673.093370.68533311CTGACTCACTGCAAGGGATGAGTCATACTTCA+
z#MA0255.110.008602134.094610.7425169CTGACTCACTGAATCACTCAA-
Pax2#MA0067.1-30.01073475.109710.784048CTGACTCACTGAGTCACGG+
YGR067C#MA0425.120.01684348.017470.99736911CTGACTCACTGACCCCACTTTTTTG+
PPARG#MA0066.110.01839338.75520.99736911CTGACTCACTGAGTAGGTCACCGTGACCTAC-
ARG81#MA0272.1-10.01921929.148350.9973698CTGACTCACTGAGAGTCAC-
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