FFCP PHASE1:Mm9::chr8:87888940..87888961,-: Difference between revisions
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|id=chr8:87888940..87888961,- | |id=chr8:87888940..87888961,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.90e-39!18;UBERON:0000948!2.90e-39!18;UBERON:0005498!2.90e-39!18;UBERON:0004140!2.90e-39!18;UBERON:0009881!2.90e-39!18;UBERON:0004141!2.90e-39!18;UBERON:0003084!2.90e-39!18;UBERON:0007005!2.90e-39!18;UBERON:0004139!2.90e-39!18;UBERON:0004291!2.90e-39!18;UBERON:0004872!1.05e-34!33;UBERON:0004535!6.33e-30!23;UBERON:0001009!6.33e-30!23;UBERON:0003103!4.40e-18!43;UBERON:0003914!2.89e-16!47;UBERON:0003081!2.80e-11!88;UBERON:0002106!1.28e-07!6;UBERON:0004457!1.28e-07!6;UBERON:0000042!1.28e-07!6;UBERON:0004854!1.28e-07!6;UBERON:0009034!1.28e-07!6;UBERON:0002095!1.28e-07!6;UBERON:0004782!1.28e-07!6;UBERON:0003281!1.28e-07!6;UBERON:0009664!1.28e-07!6;UBERON:0002296!1.28e-07!6;UBERON:0005602!1.28e-07!6;UBERON:0001179!1.28e-07!6;UBERON:0006293!1.28e-07!6;UBERON:0001048!6.09e-07!147 | |ontology_enrichment_uberon=UBERON:0007100!2.90e-39!18;UBERON:0000948!2.90e-39!18;UBERON:0005498!2.90e-39!18;UBERON:0004140!2.90e-39!18;UBERON:0009881!2.90e-39!18;UBERON:0004141!2.90e-39!18;UBERON:0003084!2.90e-39!18;UBERON:0007005!2.90e-39!18;UBERON:0004139!2.90e-39!18;UBERON:0004291!2.90e-39!18;UBERON:0004872!1.05e-34!33;UBERON:0004535!6.33e-30!23;UBERON:0001009!6.33e-30!23;UBERON:0003103!4.40e-18!43;UBERON:0003914!2.89e-16!47;UBERON:0003081!2.80e-11!88;UBERON:0002106!1.28e-07!6;UBERON:0004457!1.28e-07!6;UBERON:0000042!1.28e-07!6;UBERON:0004854!1.28e-07!6;UBERON:0009034!1.28e-07!6;UBERON:0002095!1.28e-07!6;UBERON:0004782!1.28e-07!6;UBERON:0003281!1.28e-07!6;UBERON:0009664!1.28e-07!6;UBERON:0002296!1.28e-07!6;UBERON:0005602!1.28e-07!6;UBERON:0001179!1.28e-07!6;UBERON:0006293!1.28e-07!6;UBERON:0001048!6.09e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.25e-63,18;UBERON:0000948,1.25e-63,18;UBERON:0005498,1.25e-63,18;UBERON:0004140,1.25e-63,18;UBERON:0009881,1.25e-63,18;UBERON:0004141,1.25e-63,18;UBERON:0003084,1.25e-63,18;UBERON:0007005,1.25e-63,18;UBERON:0004139,1.25e-63,18;UBERON:0004291,1.25e-63,18;UBERON:0004535,1.99e-49,23;UBERON:0001009,1.99e-49,23;UBERON:0004872,9.18e-44,33;UBERON:0003103,1.35e-25,43;UBERON:0003914,2.96e-23,47;UBERON:0003081,2.23e-15,87;UBERON:0010314,6.80e-11,92;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120;UBERON:0001048,3.21e-09,134;UBERON:0000025,2.24e-08,114;UBERON:0004111,1.11e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.03562886267751,2.11073453982987,1.08037236876609,1.89395788468168,2.36117078096885,2.62254091908543,2.09280550275367,1.07309360559848,3.15266424391358,2.96207729844265,2.95501435342371,4.62092214411378,3.21639972335731,1.97595103761946,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0,1.03193433981611,2.22233432843654,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.03562886267751,2.11073453982987,1.08037236876609,1.89395788468168,2.36117078096885,2.62254091908543,2.09280550275367,1.07309360559848,3.15266424391358,2.96207729844265,2.95501435342371,4.62092214411378,3.21639972335731,1.97595103761946,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0,1.03193433981611,2.22233432843654,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:87888940..87888961,- | |short_description=p@chr8:87888940..87888961,- | ||
}} | }} | ||
Revision as of 09:28, 14 November 2012
| Short description: | p@chr8:87888940..87888961, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr8:87888940..87888961, - |
| Coexpression cluster: | MCL_coexpression_mm9:19 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 1.25e-63 | 18 |
| heart | 1.25e-63 | 18 |
| primitive heart tube | 1.25e-63 | 18 |
| primary heart field | 1.25e-63 | 18 |
| anterior lateral plate mesoderm | 1.25e-63 | 18 |
| heart tube | 1.25e-63 | 18 |
| heart primordium | 1.25e-63 | 18 |
| cardiac mesoderm | 1.25e-63 | 18 |
| cardiogenic plate | 1.25e-63 | 18 |
| heart rudiment | 1.25e-63 | 18 |
| cardiovascular system | 1.99e-49 | 23 |
| circulatory system | 1.99e-49 | 23 |
| splanchnic layer of lateral plate mesoderm | 9.18e-44 | 33 |
| compound organ | 1.35e-25 | 43 |
| epithelial tube | 2.96e-23 | 47 |
| lateral plate mesoderm | 2.23e-15 | 87 |
| structure with developmental contribution from neural crest | 6.80e-11 | 92 |
| mesoderm | 1.48e-10 | 120 |
| mesoderm-derived structure | 1.48e-10 | 120 |
| presumptive mesoderm | 1.48e-10 | 120 |
| primordium | 3.21e-09 | 134 |
| tube | 2.24e-08 | 114 |
| anatomical conduit | 1.11e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
