FFCP PHASE1:Mm9::chr3:135354349..135354371,-: Difference between revisions
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|id=chr3:135354349..135354371,- | |id=chr3:135354349..135354371,- | ||
|ontology_enrichment_celltype=CL:0000738!3.67e-09!17;CL:0002087!3.67e-09!17;CL:0000988!5.66e-09!32;CL:0002032!5.66e-09!32;CL:0000037!5.66e-09!32;CL:0000566!5.66e-09!32;CL:0000837!5.66e-09!32;CL:0000838!1.42e-08!12;CL:0000084!5.70e-08!11;CL:0000827!5.70e-08!11;CL:0000542!1.16e-07!13;CL:0000051!1.16e-07!13;CL:0000791!3.44e-07!9;CL:0000789!3.44e-07!9;CL:0002420!3.44e-07!9;CL:0002419!3.44e-07!9;CL:0000790!3.44e-07!9;CL:0002031!4.84e-07!25;CL:0002320!4.92e-07!46;CL:0000134!4.92e-07!46 | |ontology_enrichment_celltype=CL:0000738!3.67e-09!17;CL:0002087!3.67e-09!17;CL:0000988!5.66e-09!32;CL:0002032!5.66e-09!32;CL:0000037!5.66e-09!32;CL:0000566!5.66e-09!32;CL:0000837!5.66e-09!32;CL:0000838!1.42e-08!12;CL:0000084!5.70e-08!11;CL:0000827!5.70e-08!11;CL:0000542!1.16e-07!13;CL:0000051!1.16e-07!13;CL:0000791!3.44e-07!9;CL:0000789!3.44e-07!9;CL:0002420!3.44e-07!9;CL:0002419!3.44e-07!9;CL:0000790!3.44e-07!9;CL:0002031!4.84e-07!25;CL:0002320!4.92e-07!46;CL:0000134!4.92e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.42e-11,32;CL:0002032,1.42e-11,32;CL:0000037,1.42e-11,32;CL:0000837,1.42e-11,32;CL:0000738,4.01e-10,17;CL:0002087,4.01e-10,17;CL:0002320,4.10e-10,46;CL:0000134,4.10e-10,46;CL:0000838,1.25e-09,12;CL:0002031,1.81e-09,25;CL:0000084,6.15e-09,11;CL:0000827,6.15e-09,11;CL:0000542,2.13e-08,13;CL:0000051,2.13e-08,13;CL:0000791,4.85e-08,9;CL:0000789,4.85e-08,9;CL:0002420,4.85e-08,9;CL:0002419,4.85e-08,9;CL:0000790,4.85e-08,9;CL:0000219,6.62e-08,54;CL:0000624,2.58e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.70e-14!48;UBERON:0002390!1.70e-13!45;UBERON:0003061!1.70e-13!45;UBERON:0002405!5.99e-11!70;UBERON:0003081!3.48e-09!88;UBERON:0000065!1.53e-08!41;UBERON:0001004!1.55e-08!42;UBERON:0004177!1.69e-08!29;UBERON:0002370!3.12e-07!23;UBERON:0000974!3.12e-07!23;UBERON:0004807!3.12e-07!23;UBERON:0005058!3.12e-07!23;UBERON:0003351!3.12e-07!23;UBERON:0009113!3.12e-07!23;UBERON:0003295!3.12e-07!23;UBERON:0009722!3.12e-07!23;UBERON:0005562!3.12e-07!23;UBERON:0007690!3.12e-07!23;UBERON:0003408!3.55e-07!24;UBERON:0002384!4.92e-07!46;UBERON:0006562!8.59e-07!24;UBERON:0001557!8.59e-07!24;UBERON:0001042!8.59e-07!24;UBERON:0008814!8.59e-07!24;UBERON:0009145!8.59e-07!24 | |ontology_enrichment_uberon=UBERON:0002193!1.70e-14!48;UBERON:0002390!1.70e-13!45;UBERON:0003061!1.70e-13!45;UBERON:0002405!5.99e-11!70;UBERON:0003081!3.48e-09!88;UBERON:0000065!1.53e-08!41;UBERON:0001004!1.55e-08!42;UBERON:0004177!1.69e-08!29;UBERON:0002370!3.12e-07!23;UBERON:0000974!3.12e-07!23;UBERON:0004807!3.12e-07!23;UBERON:0005058!3.12e-07!23;UBERON:0003351!3.12e-07!23;UBERON:0009113!3.12e-07!23;UBERON:0003295!3.12e-07!23;UBERON:0009722!3.12e-07!23;UBERON:0005562!3.12e-07!23;UBERON:0007690!3.12e-07!23;UBERON:0003408!3.55e-07!24;UBERON:0002384!4.92e-07!46;UBERON:0006562!8.59e-07!24;UBERON:0001557!8.59e-07!24;UBERON:0001042!8.59e-07!24;UBERON:0008814!8.59e-07!24;UBERON:0009145!8.59e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.91e-17,48;UBERON:0002405,2.91e-17,48;UBERON:0002390,4.21e-16,45;UBERON:0003061,4.21e-16,45;UBERON:0002384,4.10e-10,46;UBERON:0000065,6.11e-10,41;UBERON:0001004,6.23e-10,42;UBERON:0000077,6.48e-10,35;UBERON:0004177,6.70e-10,29;UBERON:0005057,6.70e-10,29;UBERON:0002370,6.53e-09,23;UBERON:0000974,6.53e-09,23;UBERON:0004807,6.53e-09,23;UBERON:0005058,6.53e-09,23;UBERON:0003351,6.53e-09,23;UBERON:0009113,6.53e-09,23;UBERON:0003295,6.53e-09,23;UBERON:0009722,6.53e-09,23;UBERON:0005562,6.53e-09,23;UBERON:0007690,6.53e-09,23;UBERON:0003408,7.94e-09,24;UBERON:0003081,2.70e-08,87;UBERON:0006562,3.69e-08,24;UBERON:0001557,3.69e-08,24;UBERON:0001042,3.69e-08,24;UBERON:0008814,3.69e-08,24;UBERON:0009145,3.69e-08,24;UBERON:0002204,5.79e-08,32;UBERON:0000072,8.54e-08,27;UBERON:0005911,1.32e-07,69;UBERON:0002371,3.87e-07,16 | |||
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| ||
|short_description=p6@Nfkb1 | |short_description=p6@Nfkb1 | ||
}} | }} |
Revision as of 16:37, 14 November 2012
Short description: | p6@Nfkb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nfkb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1066 |
Association with transcript: | 138bp_to_ENSMUST00000029812_5end |
EntrezGene: | Nfkb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.42e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.42e-11 | 32 |
hematopoietic stem cell | 1.42e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.42e-11 | 32 |
leukocyte | 4.01e-10 | 17 |
nongranular leukocyte | 4.01e-10 | 17 |
connective tissue cell | 4.10e-10 | 46 |
mesenchymal cell | 4.10e-10 | 46 |
lymphoid lineage restricted progenitor cell | 1.25e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 1.81e-09 | 25 |
T cell | 6.15e-09 | 11 |
pro-T cell | 6.15e-09 | 11 |
lymphocyte | 2.13e-08 | 13 |
common lymphoid progenitor | 2.13e-08 | 13 |
mature alpha-beta T cell | 4.85e-08 | 9 |
alpha-beta T cell | 4.85e-08 | 9 |
immature T cell | 4.85e-08 | 9 |
mature T cell | 4.85e-08 | 9 |
immature alpha-beta T cell | 4.85e-08 | 9 |
motile cell | 6.62e-08 | 54 |
CD4-positive, alpha-beta T cell | 2.58e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.91e-17 | 48 |
immune system | 2.91e-17 | 48 |
hematopoietic system | 4.21e-16 | 45 |
blood island | 4.21e-16 | 45 |
connective tissue | 4.10e-10 | 46 |
respiratory tract | 6.11e-10 | 41 |
respiratory system | 6.23e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 6.48e-10 | 35 |
hemopoietic organ | 6.70e-10 | 29 |
immune organ | 6.70e-10 | 29 |
thymus | 6.53e-09 | 23 |
neck | 6.53e-09 | 23 |
respiratory system epithelium | 6.53e-09 | 23 |
hemolymphoid system gland | 6.53e-09 | 23 |
pharyngeal epithelium | 6.53e-09 | 23 |
thymic region | 6.53e-09 | 23 |
pharyngeal gland | 6.53e-09 | 23 |
entire pharyngeal arch endoderm | 6.53e-09 | 23 |
thymus primordium | 6.53e-09 | 23 |
early pharyngeal endoderm | 6.53e-09 | 23 |
gland of gut | 7.94e-09 | 24 |
lateral plate mesoderm | 2.70e-08 | 87 |
pharynx | 3.69e-08 | 24 |
upper respiratory tract | 3.69e-08 | 24 |
chordate pharynx | 3.69e-08 | 24 |
pharyngeal arch system | 3.69e-08 | 24 |
pharyngeal region of foregut | 3.69e-08 | 24 |
musculoskeletal system | 5.79e-08 | 32 |
segment of respiratory tract | 8.54e-08 | 27 |
endo-epithelium | 1.32e-07 | 69 |
bone marrow | 3.87e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.