FFCP PHASE1:Mm9::chr18:43552932..43552952,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr18:43552932..43552952,- | |id=chr18:43552932..43552952,- | ||
|ontology_enrichment_celltype=CL:0000540!6.67e-15!33;CL:0000047!6.67e-15!33;CL:0000031!6.67e-15!33;CL:0000404!6.67e-15!33;CL:0000393!4.13e-13!39;CL:0000211!4.13e-13!39;CL:0000221!1.78e-12!44;CL:0000133!1.78e-12!44;CL:0002319!2.03e-12!43;CL:0000055!1.05e-10!50;CL:0000117!1.74e-10!23;CL:0000337!1.74e-10!23 | |ontology_enrichment_celltype=CL:0000540!6.67e-15!33;CL:0000047!6.67e-15!33;CL:0000031!6.67e-15!33;CL:0000404!6.67e-15!33;CL:0000393!4.13e-13!39;CL:0000211!4.13e-13!39;CL:0000221!1.78e-12!44;CL:0000133!1.78e-12!44;CL:0002319!2.03e-12!43;CL:0000055!1.05e-10!50;CL:0000117!1.74e-10!23;CL:0000337!1.74e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.00e-21,33;CL:0000047,2.00e-21,33;CL:0000031,2.00e-21,33;CL:0000404,2.00e-21,33;CL:0000393,6.37e-18,39;CL:0000211,6.37e-18,39;CL:0002319,2.65e-14,43;CL:0000117,5.15e-14,23;CL:0000337,5.15e-14,23;CL:0000221,8.92e-14,44;CL:0000133,8.92e-14,44;CL:0002609,1.13e-08,6;CL:0000107,4.16e-08,9;CL:0002321,6.06e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.21e-11!102;UBERON:0000924!2.21e-11!102;UBERON:0006601!2.21e-11!102;UBERON:0000073!4.49e-11!75;UBERON:0001016!4.49e-11!75;UBERON:0001017!6.80e-11!73;UBERON:0005743!6.80e-11!73;UBERON:0002346!9.79e-11!71;UBERON:0003075!9.79e-11!71;UBERON:0007284!9.79e-11!71 | |ontology_enrichment_uberon=UBERON:0004121!2.21e-11!102;UBERON:0000924!2.21e-11!102;UBERON:0006601!2.21e-11!102;UBERON:0000073!4.49e-11!75;UBERON:0001016!4.49e-11!75;UBERON:0001017!6.80e-11!73;UBERON:0005743!6.80e-11!73;UBERON:0002346!9.79e-11!71;UBERON:0003075!9.79e-11!71;UBERON:0007284!9.79e-11!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-09,73;UBERON:0001016,3.52e-09,75;UBERON:0002020,5.85e-09,34;UBERON:0004121,6.37e-09,95;UBERON:0000924,6.37e-09,95;UBERON:0006601,6.37e-09,95;UBERON:0002346,1.23e-08,64;UBERON:0003075,1.23e-08,64;UBERON:0007284,1.23e-08,64;UBERON:0002410,4.16e-08,9;UBERON:0010371,4.36e-07,73 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0.782391344348039,0.436050312760893,0,0,0.279972843250725,0,0,0,0,0.514518872071894,1.43266719969378,0,34.7984312678508,31.2104677770499,26.6209189472595,0,0,0,0,0,0.299600110518405,0.384218305321555,26.3371615263533,32.8064430146008,33.4416688548697,4.57041575046086,4.63823935998388,27.9279022210095,25.6865862328873,17.4651569455904,0,0.638436690425939,0.307213066512487,26.509143833769,28.361169516747,23.4411016750542,0.558365998002762,0,0.45839474333043,11.7851434189467,7.40332740155335,20.8767379324337,0.227178579999552,0.604572480854284,0,0,0,0,0.649776417447669,0,0.140444420131752,0.852151612890289,1.03914401841148,1.06001872353102,0.422530259330042,0,5.09610479413291,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.913396434936424,2.7673859670727,1.65794904607885,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,41.5915905493581,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,0.611036183101898,0.248813941220186,0,0.420883711772948,0.520481771850815,3.67843367093557,3.06105620669094,4.21973489940002,4.21826294738233,3.33095672740609,3.84177070694888,0.258703370739016,0.646703978798527,0,0.703804496655795,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.817357396570186,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,42.4996049126445,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.605050573870028,0.667134131534611,0.570676878337677,0,0.988193728344065,0.502670417600539,0.596869416123452,0,0,0,0,0,0.571242563048644,0,0.407302655690628,0,0,0.189709611372772,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,2.83957397474631,4.29482618726302,5.17016154558717,1.67278158566786,4.01037613348309,1.69845918473299,3.64329631507405,3.21481443702443,6.7198922250909,0,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.900305470156551,0.517434735131018,0.643011105094777,0.177340233642274,0.891844088010353,2.13913726782757,1.2178597964584,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.474503990371703,1.21991680276109,0.756037385752609,0.418176592028937,0,0.674321731924103,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.704143431874524,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,1.14579102687879,0.171853182343688,0,0,0,0,0,0.51776031175182,2.17953429926771,1.59609949360412,2.04880326904961,2.43106717068294,5.44994222832754,4.77993121970037,4.4449345560323,3.09052585858341,3.53011130550997,3.28506375292937,3.54871019846336,4.90428487603798,4.02658482120494,3.3293079250532,3.96304735793732,3.81034953026459,3.1288768005111,5.98018583437486,4.53294490883637,5.00476328456951,4.80016953339582,3.90446773550542,5.00715998889374,3.34296758254356,3.57615645578256,3.89227196301712,3.29270351170991,3.94604567156764,3.66671107383827,3.36685362994643,4.27086065247027,4.23569274214923,5.32000356120596,5.73266312388074,4.05103883060397,8.74337022782811,5.14649538579898,3.43793686477277,1.14772999241306,0,0.695603506861264 | |phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0.782391344348039,0.436050312760893,0,0,0.279972843250725,0,0,0,0,0.514518872071894,1.43266719969378,0,34.7984312678508,31.2104677770499,26.6209189472595,0,0,0,0,0,0.299600110518405,0.384218305321555,26.3371615263533,32.8064430146008,33.4416688548697,4.57041575046086,4.63823935998388,27.9279022210095,25.6865862328873,17.4651569455904,0,0.638436690425939,0.307213066512487,26.509143833769,28.361169516747,23.4411016750542,0.558365998002762,0,0.45839474333043,11.7851434189467,7.40332740155335,20.8767379324337,0.227178579999552,0.604572480854284,0,0,0,0,0.649776417447669,0,0.140444420131752,0.852151612890289,1.03914401841148,1.06001872353102,0.422530259330042,0,5.09610479413291,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.913396434936424,2.7673859670727,1.65794904607885,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,41.5915905493581,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,0.611036183101898,0.248813941220186,0,0.420883711772948,0.520481771850815,3.67843367093557,3.06105620669094,4.21973489940002,4.21826294738233,3.33095672740609,3.84177070694888,0.258703370739016,0.646703978798527,0,0.703804496655795,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.817357396570186,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,42.4996049126445,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.605050573870028,0.667134131534611,0.570676878337677,0,0.988193728344065,0.502670417600539,0.596869416123452,0,0,0,0,0,0.571242563048644,0,0.407302655690628,0,0,0.189709611372772,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,2.83957397474631,4.29482618726302,5.17016154558717,1.67278158566786,4.01037613348309,1.69845918473299,3.64329631507405,3.21481443702443,6.7198922250909,0,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.900305470156551,0.517434735131018,0.643011105094777,0.177340233642274,0.891844088010353,2.13913726782757,1.2178597964584,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.474503990371703,1.21991680276109,0.756037385752609,0.418176592028937,0,0.674321731924103,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.704143431874524,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,1.14579102687879,0.171853182343688,0,0,0,0,0,0.51776031175182,2.17953429926771,1.59609949360412,2.04880326904961,2.43106717068294,5.44994222832754,4.77993121970037,4.4449345560323,3.09052585858341,3.53011130550997,3.28506375292937,3.54871019846336,4.90428487603798,4.02658482120494,3.3293079250532,3.96304735793732,3.81034953026459,3.1288768005111,5.98018583437486,4.53294490883637,5.00476328456951,4.80016953339582,3.90446773550542,5.00715998889374,3.34296758254356,3.57615645578256,3.89227196301712,3.29270351170991,3.94604567156764,3.66671107383827,3.36685362994643,4.27086065247027,4.23569274214923,5.32000356120596,5.73266312388074,4.05103883060397,8.74337022782811,5.14649538579898,3.43793686477277,1.14772999241306,0,0.695603506861264 | ||
|short_description=p7@Dpysl3 | |short_description=p7@Dpysl3 | ||
}} | }} |
Revision as of 23:25, 14 November 2012
Short description: | p7@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 32bp_to_NM_009468, uc008euh.2_5end |
EntrezGene: | Dpysl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.00e-21 | 33 |
neuronal stem cell | 2.00e-21 | 33 |
neuroblast | 2.00e-21 | 33 |
electrically signaling cell | 2.00e-21 | 33 |
electrically responsive cell | 6.37e-18 | 39 |
electrically active cell | 6.37e-18 | 39 |
neural cell | 2.65e-14 | 43 |
CNS neuron (sensu Vertebrata) | 5.15e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.15e-14 | 23 |
ectodermal cell | 8.92e-14 | 44 |
neurectodermal cell | 8.92e-14 | 44 |
neuron of cerebral cortex | 1.13e-08 | 6 |
autonomic neuron | 4.16e-08 | 9 |
embryonic cell | 6.06e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.06e-09 | 73 |
nervous system | 3.52e-09 | 75 |
gray matter | 5.85e-09 | 34 |
ectoderm-derived structure | 6.37e-09 | 95 |
ectoderm | 6.37e-09 | 95 |
presumptive ectoderm | 6.37e-09 | 95 |
neurectoderm | 1.23e-08 | 64 |
neural plate | 1.23e-08 | 64 |
presumptive neural plate | 1.23e-08 | 64 |
autonomic nervous system | 4.16e-08 | 9 |
ecto-epithelium | 4.36e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.