FFCP PHASE1:Mm9::chr12:4082596..4082638,+: Difference between revisions
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|id=chr12:4082596..4082638,+ | |id=chr12:4082596..4082638,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0002319!2.20e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39 | |ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0002319!2.20e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.09e-10,33;CL:0000047,2.09e-10,33;CL:0000031,2.09e-10,33;CL:0000404,2.09e-10,33;CL:0000221,1.36e-09,44;CL:0000133,1.36e-09,44;CL:0002319,2.19e-09,43;CL:0000117,3.91e-09,23;CL:0000337,3.91e-09,23;CL:0000393,3.59e-07,39;CL:0000211,3.59e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.64e-25!73;UBERON:0005743!1.64e-25!73;UBERON:0000073!3.27e-24!75;UBERON:0001016!3.27e-24!75;UBERON:0000033!1.05e-21!63;UBERON:0000153!1.55e-20!94;UBERON:0007811!1.63e-20!86;UBERON:0001049!1.11e-19!52;UBERON:0005068!1.11e-19!52;UBERON:0006241!1.11e-19!52;UBERON:0007135!1.11e-19!52;UBERON:0000955!4.27e-19!50;UBERON:0006238!4.27e-19!50;UBERON:0004121!1.68e-18!102;UBERON:0000924!1.68e-18!102;UBERON:0006601!1.68e-18!102;UBERON:0002616!1.87e-18!49;UBERON:0002346!4.47e-18!71;UBERON:0003075!4.47e-18!71;UBERON:0007284!4.47e-18!71;UBERON:0003056!6.38e-17!49;UBERON:0003080!1.60e-14!40;UBERON:0002020!2.43e-14!34;UBERON:0002780!6.98e-14!39;UBERON:0001890!6.98e-14!39;UBERON:0006240!6.98e-14!39;UBERON:0002791!7.68e-12!29;UBERON:0003528!7.68e-12!29;UBERON:0001893!7.68e-12!29;UBERON:0002619!1.30e-08!17;UBERON:0000956!8.43e-08!21;UBERON:0001869!8.43e-08!21;UBERON:0000203!8.43e-08!21;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.64e-25!73;UBERON:0005743!1.64e-25!73;UBERON:0000073!3.27e-24!75;UBERON:0001016!3.27e-24!75;UBERON:0000033!1.05e-21!63;UBERON:0000153!1.55e-20!94;UBERON:0007811!1.63e-20!86;UBERON:0001049!1.11e-19!52;UBERON:0005068!1.11e-19!52;UBERON:0006241!1.11e-19!52;UBERON:0007135!1.11e-19!52;UBERON:0000955!4.27e-19!50;UBERON:0006238!4.27e-19!50;UBERON:0004121!1.68e-18!102;UBERON:0000924!1.68e-18!102;UBERON:0006601!1.68e-18!102;UBERON:0002616!1.87e-18!49;UBERON:0002346!4.47e-18!71;UBERON:0003075!4.47e-18!71;UBERON:0007284!4.47e-18!71;UBERON:0003056!6.38e-17!49;UBERON:0003080!1.60e-14!40;UBERON:0002020!2.43e-14!34;UBERON:0002780!6.98e-14!39;UBERON:0001890!6.98e-14!39;UBERON:0006240!6.98e-14!39;UBERON:0002791!7.68e-12!29;UBERON:0003528!7.68e-12!29;UBERON:0001893!7.68e-12!29;UBERON:0002619!1.30e-08!17;UBERON:0000956!8.43e-08!21;UBERON:0001869!8.43e-08!21;UBERON:0000203!8.43e-08!21;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-25,73;UBERON:0001016,3.20e-24,75;UBERON:0002346,1.91e-22,64;UBERON:0003075,1.91e-22,64;UBERON:0007284,1.91e-22,64;UBERON:0004121,7.48e-22,95;UBERON:0000924,7.48e-22,95;UBERON:0006601,7.48e-22,95;UBERON:0000073,3.65e-21,54;UBERON:0001049,1.09e-19,52;UBERON:0005068,1.09e-19,52;UBERON:0006241,1.09e-19,52;UBERON:0007135,1.09e-19,52;UBERON:0010314,7.61e-19,92;UBERON:0010371,4.37e-18,73;UBERON:0000955,5.22e-17,47;UBERON:0006238,5.22e-17,47;UBERON:0003056,6.29e-17,49;UBERON:0002616,2.20e-16,46;UBERON:0003080,1.58e-14,40;UBERON:0002020,2.40e-14,34;UBERON:0002780,6.90e-14,39;UBERON:0001890,6.90e-14,39;UBERON:0006240,6.90e-14,39;UBERON:0003528,7.61e-12,29;UBERON:0002791,7.61e-12,29;UBERON:0001893,7.61e-12,29;UBERON:0002619,1.29e-08,17;UBERON:0000956,8.38e-08,21;UBERON:0001869,8.38e-08,21;UBERON:0000203,8.38e-08,21;UBERON:0002021,5.21e-07,10;UBERON:0000411,5.21e-07,10;UBERON:0001950,5.21e-07,10 | |||
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| ||
|short_description=p1@Dnajc27 | |short_description=p1@Dnajc27 | ||
}} | }} |
Revision as of 23:53, 14 November 2012
Short description: | p1@Dnajc27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajc27_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 0bp_to_ENSMUST00000020986, ENSMUST00000049584_5end |
EntrezGene: | Dnajc27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.09e-10 | 33 |
neuronal stem cell | 2.09e-10 | 33 |
neuroblast | 2.09e-10 | 33 |
electrically signaling cell | 2.09e-10 | 33 |
ectodermal cell | 1.36e-09 | 44 |
neurectodermal cell | 1.36e-09 | 44 |
neural cell | 2.19e-09 | 43 |
CNS neuron (sensu Vertebrata) | 3.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.91e-09 | 23 |
electrically responsive cell | 3.59e-07 | 39 |
electrically active cell | 3.59e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.61e-25 | 73 |
nervous system | 3.20e-24 | 75 |
neurectoderm | 1.91e-22 | 64 |
neural plate | 1.91e-22 | 64 |
presumptive neural plate | 1.91e-22 | 64 |
ectoderm-derived structure | 7.48e-22 | 95 |
ectoderm | 7.48e-22 | 95 |
presumptive ectoderm | 7.48e-22 | 95 |
regional part of nervous system | 3.65e-21 | 54 |
neural tube | 1.09e-19 | 52 |
neural rod | 1.09e-19 | 52 |
future spinal cord | 1.09e-19 | 52 |
neural keel | 1.09e-19 | 52 |
structure with developmental contribution from neural crest | 7.61e-19 | 92 |
ecto-epithelium | 4.37e-18 | 73 |
brain | 5.22e-17 | 47 |
future brain | 5.22e-17 | 47 |
pre-chordal neural plate | 6.29e-17 | 49 |
regional part of brain | 2.20e-16 | 46 |
anterior neural tube | 1.58e-14 | 40 |
gray matter | 2.40e-14 | 34 |
regional part of forebrain | 6.90e-14 | 39 |
forebrain | 6.90e-14 | 39 |
future forebrain | 6.90e-14 | 39 |
brain grey matter | 7.61e-12 | 29 |
regional part of telencephalon | 7.61e-12 | 29 |
telencephalon | 7.61e-12 | 29 |
regional part of cerebral cortex | 1.29e-08 | 17 |
cerebral cortex | 8.38e-08 | 21 |
cerebral hemisphere | 8.38e-08 | 21 |
pallium | 8.38e-08 | 21 |
occipital lobe | 5.21e-07 | 10 |
visual cortex | 5.21e-07 | 10 |
neocortex | 5.21e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.