FFCP PHASE1:Mm9::chr6:58857047..58857092,-: Difference between revisions
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|id=chr6:58857047..58857092,- | |id=chr6:58857047..58857092,- | ||
|ontology_enrichment_celltype=CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000117!4.05e-11!23;CL:0000337!4.05e-11!23;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0002319!1.93e-10!43;CL:0000393!3.76e-08!39;CL:0000211!3.76e-08!39 | |ontology_enrichment_celltype=CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000117!4.05e-11!23;CL:0000337!4.05e-11!23;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0002319!1.93e-10!43;CL:0000393!3.76e-08!39;CL:0000211!3.76e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.79e-13,33;CL:0000047,2.79e-13,33;CL:0000031,2.79e-13,33;CL:0000404,2.79e-13,33;CL:0000117,1.09e-11,23;CL:0000337,1.09e-11,23;CL:0000221,2.67e-10,44;CL:0000133,2.67e-10,44;CL:0002319,3.57e-10,43;CL:0000393,4.68e-09,39;CL:0000211,4.68e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.79e-28!102;UBERON:0000924!1.79e-28!102;UBERON:0006601!1.79e-28!102;UBERON:0000073!2.36e-27!75;UBERON:0001016!2.36e-27!75;UBERON:0001017!2.53e-27!73;UBERON:0005743!2.53e-27!73;UBERON:0002346!3.31e-26!71;UBERON:0003075!3.31e-26!71;UBERON:0007284!3.31e-26!71;UBERON:0001049!1.87e-21!52;UBERON:0005068!1.87e-21!52;UBERON:0006241!1.87e-21!52;UBERON:0007135!1.87e-21!52;UBERON:0000033!3.81e-21!63;UBERON:0000955!2.65e-20!50;UBERON:0006238!2.65e-20!50;UBERON:0002616!9.91e-20!49;UBERON:0003056!4.16e-17!49;UBERON:0003080!5.43e-16!40;UBERON:0002780!2.73e-15!39;UBERON:0001890!2.73e-15!39;UBERON:0006240!2.73e-15!39;UBERON:0002020!1.07e-14!34;UBERON:0002791!9.66e-12!29;UBERON:0003528!9.66e-12!29;UBERON:0001893!9.66e-12!29;UBERON:0000468!5.72e-08!333;UBERON:0007811!1.76e-07!86;UBERON:0000956!2.11e-07!21;UBERON:0001869!2.11e-07!21;UBERON:0000203!2.11e-07!21;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000153!9.24e-07!94 | |ontology_enrichment_uberon=UBERON:0004121!1.79e-28!102;UBERON:0000924!1.79e-28!102;UBERON:0006601!1.79e-28!102;UBERON:0000073!2.36e-27!75;UBERON:0001016!2.36e-27!75;UBERON:0001017!2.53e-27!73;UBERON:0005743!2.53e-27!73;UBERON:0002346!3.31e-26!71;UBERON:0003075!3.31e-26!71;UBERON:0007284!3.31e-26!71;UBERON:0001049!1.87e-21!52;UBERON:0005068!1.87e-21!52;UBERON:0006241!1.87e-21!52;UBERON:0007135!1.87e-21!52;UBERON:0000033!3.81e-21!63;UBERON:0000955!2.65e-20!50;UBERON:0006238!2.65e-20!50;UBERON:0002616!9.91e-20!49;UBERON:0003056!4.16e-17!49;UBERON:0003080!5.43e-16!40;UBERON:0002780!2.73e-15!39;UBERON:0001890!2.73e-15!39;UBERON:0006240!2.73e-15!39;UBERON:0002020!1.07e-14!34;UBERON:0002791!9.66e-12!29;UBERON:0003528!9.66e-12!29;UBERON:0001893!9.66e-12!29;UBERON:0000468!5.72e-08!333;UBERON:0007811!1.76e-07!86;UBERON:0000956!2.11e-07!21;UBERON:0001869!2.11e-07!21;UBERON:0000203!2.11e-07!21;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000153!9.24e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.20e-28,75;UBERON:0001017,9.05e-28,73;UBERON:0004121,9.08e-26,95;UBERON:0000924,9.08e-26,95;UBERON:0006601,9.08e-26,95;UBERON:0002346,6.86e-24,64;UBERON:0003075,6.86e-24,64;UBERON:0007284,6.86e-24,64;UBERON:0000073,4.17e-23,54;UBERON:0001049,1.53e-21,52;UBERON:0005068,1.53e-21,52;UBERON:0006241,1.53e-21,52;UBERON:0007135,1.53e-21,52;UBERON:0010371,2.46e-21,73;UBERON:0010314,2.27e-19,92;UBERON:0000955,3.96e-18,47;UBERON:0006238,3.96e-18,47;UBERON:0002616,1.52e-17,46;UBERON:0003056,2.05e-17,49;UBERON:0003080,3.36e-16,40;UBERON:0002780,1.82e-15,39;UBERON:0001890,1.82e-15,39;UBERON:0006240,1.82e-15,39;UBERON:0002020,8.21e-15,34;UBERON:0003528,1.02e-11,29;UBERON:0002791,1.02e-11,29;UBERON:0001893,1.02e-11,29;UBERON:0002021,1.79e-07,10;UBERON:0000411,1.79e-07,10;UBERON:0001950,1.79e-07,10;UBERON:0000956,3.41e-07,21;UBERON:0001869,3.41e-07,21;UBERON:0000203,3.41e-07,21 | |||
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|short_description=p1@Nap1l5 | |short_description=p1@Nap1l5 | ||
}} | }} |
Revision as of 06:05, 15 November 2012
Short description: | p1@Nap1l5 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nap1l5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 27bp_to_ENSMUST00000059539, NM_021432, uc009cdg.1_5end |
EntrezGene: | Nap1l5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.79e-13 | 33 |
neuronal stem cell | 2.79e-13 | 33 |
neuroblast | 2.79e-13 | 33 |
electrically signaling cell | 2.79e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.09e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-11 | 23 |
ectodermal cell | 2.67e-10 | 44 |
neurectodermal cell | 2.67e-10 | 44 |
neural cell | 3.57e-10 | 43 |
electrically responsive cell | 4.68e-09 | 39 |
electrically active cell | 4.68e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.20e-28 | 75 |
central nervous system | 9.05e-28 | 73 |
ectoderm-derived structure | 9.08e-26 | 95 |
ectoderm | 9.08e-26 | 95 |
presumptive ectoderm | 9.08e-26 | 95 |
neurectoderm | 6.86e-24 | 64 |
neural plate | 6.86e-24 | 64 |
presumptive neural plate | 6.86e-24 | 64 |
regional part of nervous system | 4.17e-23 | 54 |
neural tube | 1.53e-21 | 52 |
neural rod | 1.53e-21 | 52 |
future spinal cord | 1.53e-21 | 52 |
neural keel | 1.53e-21 | 52 |
ecto-epithelium | 2.46e-21 | 73 |
structure with developmental contribution from neural crest | 2.27e-19 | 92 |
brain | 3.96e-18 | 47 |
future brain | 3.96e-18 | 47 |
regional part of brain | 1.52e-17 | 46 |
pre-chordal neural plate | 2.05e-17 | 49 |
anterior neural tube | 3.36e-16 | 40 |
regional part of forebrain | 1.82e-15 | 39 |
forebrain | 1.82e-15 | 39 |
future forebrain | 1.82e-15 | 39 |
gray matter | 8.21e-15 | 34 |
brain grey matter | 1.02e-11 | 29 |
regional part of telencephalon | 1.02e-11 | 29 |
telencephalon | 1.02e-11 | 29 |
occipital lobe | 1.79e-07 | 10 |
visual cortex | 1.79e-07 | 10 |
neocortex | 1.79e-07 | 10 |
cerebral cortex | 3.41e-07 | 21 |
cerebral hemisphere | 3.41e-07 | 21 |
pallium | 3.41e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.